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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022799 ID=TCONS_00022799|Name=TCONS_00022799|organism=Clytia hemisphaerica|type=transcript|length=1449bp
ATCCATTTCATTTACGCCTCGAGATTTTAGATCATGCTATAACAAAACAA
TTACCTGGTTTTGATTGTCCAGATTCTTTGACATTTGGCATGGTCATCAC
ATGTTTATCTGAAAGGACCCGATCCAATTGTTGATAGAATTTGCACGTCT
TAAATTCAACACCACTCTTTCCCTCGTTGTGTTGCTTACACTTCTTGTAT
GCGTCTTTCAGTCCTTTTATTTTGGCTTTACATTTTGTAATGTTTTTGGG
CTTTCCTTTTACTTTGTTAACTGCGTCTCTTATTTTACCCCACGCTTTGT
TAGCATTTGTCGAATTCAACATGTCTTGATTCTCAACCCATAAATAAACT
AATGTAGTGGTCTGTTCTGAGGTCCAGCTATCTCTTGTTGTGTTTTGTGA
TTGTGATGTCGAGGGTTGTTCGGTCGACGGTTCGCTTTGTAGCTGATTCT
GTTGAAAATTTGATCCTGTTTGTGGCTGATTCGGTTGTTGGTAAGCTTGT
TGACTTGGAAAAACCGGTCTTGTTTGTGGCAGATTTTGCTGCTNGGGCTT
TCCGTTTACTTTGTTAACTGCGTCTCTTATTTTACCCCACGCTTTGTTAG
CATTTGTCGAATTCAACATGTCTTGATTCTCAACCCATAAATAAACTAAT
GTAGTGGTCTGTTCTGAGGTCCAGCTATCTCTTGTTGTGTTTTGTGATTG
TGATGTCGAGGGTTGTTCGGTCGACGGTTCGCTTTGTAGCTGATTCTGTT
GAAAATTTGATCCTGTTTGTGGCTGATTCGGTTGTTGGTAAGCTTGTTGA
CTTGGAAAAACCGGTCTTGTTTGTGGCAGATTTTGCTGCTGATGCATTTC
CTGGTTAGGAAAATTTTGCACTGCTGCTTGGTAGTTTTGATAGTATGTTG
GATGGTAGTATGGTGGCGGAAATGAcatttttcatccaaaaatacTTGTT
TTAACAAATCCAATTCTCCCTCAACTTTTCTTCTCTTCTCAATGACTCAA
TCAAACCACATCAAATCACAACccacacaaaaaaaaacagacacATTTTT
CTCactcatgaaaaatatgaaaaagtgtGTTCTTCtgatctcaaattttc
ttttgtttcgagCACCTATTCATACTCAATAAATGGGCCCTAATTTTAAC
AATAGAGTcaaaattttaagacatgcTCGGGAGCATGTCTTATTTCGGTT
TAATAATTAGACCCATTATATAAATNTTCTTTTGTTTCGAGCCCCTATTC
ATACTCAATAAATGGGCCCTAATTTTAACAATAGAGTcaaaattttaaga
catgcTCGGGAGCATGTCTTATTTCGGTTTAATAATTAGACCCATTATAT
AAATTTGAATagaagatttatttttttgcaagcGGTCAGACTACATTTTG
TCTTGTTACTATGGATACGGGTGTTATTtaacgatttttttttctagTG Run BLAST on NCBI protein sequence of TCONS_00022799-protein >TCONS_00022799-protein ID=TCONS_00022799-protein|Name=TCONS_00022799-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MSFPPPYYHPTYYQNYQAAVQNFPNQEMHQQQNLPQTRPVFPSQQAYQQP
NQPQTGSNFQQNQLQSEPSTEQPSTSQSQNTTRDSWTSEQTTTLVYLWVE
NQDMLNSTNANKAWGKIRDAVNKVNGKPXQQNLPQTRPVFPSQQAYQQPN
QPQTGSNFQQNQLQSEPSTEQPSTSQSQNTTRDSWTSEQTTTLVYLWVEN
QDMLNSTNANKAWGKIRDAVNKVKGKPKNITKCKAKIKGLKDAYKKCKQH
NEGKSGVEFKTCKFYQQLDRVLSDKHVMTMPNVKESGQSKPGNCFVIA Run BLAST on NCBI transcript from alignment at sc0000432:134377..135825 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022799 ID=TCONS_00022799|Name=TCONS_00022799|organism=Clytia hemisphaerica|type=transcript|length=1449bp|location=Sequence derived from alignment at sc0000432:134377..135825 (Clytia hemisphaerica)
CActagaaaaaaaaatcgttaAATAACACCCGTATCCATAGTAACAAGAC
AAAATGTAGTCTGACCgcttgcaaaaaaataaatcttctATTCAAATTTA
TATAATGGGTCTAATTATTAAACCGAAATAAGACATGCTCCCGAgcatgt
cttaaaattttgACTCTATTGTTAAAATTAGGGCCCATTTATTGAGTATG
AATAGGGGCTCGAAACAAAAGAANATTTATATAATGGGTCTAATTATTAA
ACCGAAATAAGACATGCTCCCGAgcatgtcttaaaattttgACTCTATTG
TTAAAATTAGGGCCCATTTATTGAGTATGAATAGGTGctcgaaacaaaag
aaaatttgagatcaGAAGAACacactttttcatatttttcatgagtGAGA
AAAATgtgtctgtttttttttgtgtggGTTGTGATTTGATGTGGTTTGAT
TGAGTCATTGAGAAGAGAAGAAAAGTTGAGGGAGAATTGGATTTGTTAAA
ACAAgtatttttggatgaaaaatgTCATTTCCGCCACCATACTACCATCC
AACATACTATCAAAACTACCAAGCAGCAGTGCAAAATTTTCCTAACCAGG
AAATGCATCAGCAGCAAAATCTGCCACAAACAAGACCGGTTTTTCCAAGT
CAACAAGCTTACCAACAACCGAATCAGCCACAAACAGGATCAAATTTTCA
ACAGAATCAGCTACAAAGCGAACCGTCGACCGAACAACCCTCGACATCAC
AATCACAAAACACAACAAGAGATAGCTGGACCTCAGAACAGACCACTACA
TTAGTTTATTTATGGGTTGAGAATCAAGACATGTTGAATTCGACAAATGC
TAACAAAGCGTGGGGTAAAATAAGAGACGCAGTTAACAAAGTAAACGGAA
AGCCCNAGCAGCAAAATCTGCCACAAACAAGACCGGTTTTTCCAAGTCAA
CAAGCTTACCAACAACCGAATCAGCCACAAACAGGATCAAATTTTCAACA
GAATCAGCTACAAAGCGAACCGTCGACCGAACAACCCTCGACATCACAAT
CACAAAACACAACAAGAGATAGCTGGACCTCAGAACAGACCACTACATTA
GTTTATTTATGGGTTGAGAATCAAGACATGTTGAATTCGACAAATGCTAA
CAAAGCGTGGGGTAAAATAAGAGACGCAGTTAACAAAGTAAAAGGAAAGC
CCAAAAACATTACAAAATGTAAAGCCAAAATAAAAGGACTGAAAGACGCA
TACAAGAAGTGTAAGCAACACAACGAGGGAAAGAGTGGTGTTGAATTTAA
GACGTGCAAATTCTATCAACAATTGGATCGGGTCCTTTCAGATAAACATG
TGATGACCATGCCAAATGTCAAAGAATCTGGACAATCAAAACCAGGTAAT
TGTTTTGTTATAGCATGATCTAAAATCTCGAGGCGTAAATGAAATGGAT Coding sequence (CDS) from alignment at sc0000432:134377..135825 >TCONS_00022799 ID=TCONS_00022799|Name=TCONS_00022799|organism=Clytia hemisphaerica|type=CDS|length=897bp|location=Sequence derived from alignment at sc0000432:134377..135825 (Clytia hemisphaerica)
atgTCATTTCCGCCACCATACTACCATCCAACATACTATCAAAACTACCA
AGCAGCAGTGCAAAATTTTCCTAACCAGGAAATGCATCAGCAGCAAAATC
TGCCACAAACAAGACCGGTTTTTCCAAGTCAACAAGCTTACCAACAACCG
AATCAGCCACAAACAGGATCAAATTTTCAACAGAATCAGCTACAAAGCGA
ACCGTCGACCGAACAACCCTCGACATCACAATCACAAAACACAACAAGAG
ATAGCTGGACCTCAGAACAGACCACTACATTAGTTTATTTATGGGTTGAG
AATCAAGACATGTTGAATTCGACAAATGCTAACAAAGCGTGGGGTAAAAT
AAGAGACGCAGTTAACAAAGTAAACGGAAAGCCCNAGCAGCAAAATCTGC
CACAAACAAGACCGGTTTTTCCAAGTCAACAAGCTTACCAACAACCGAAT
CAGCCACAAACAGGATCAAATTTTCAACAGAATCAGCTACAAAGCGAACC
GTCGACCGAACAACCCTCGACATCACAATCACAAAACACAACAAGAGATA
GCTGGACCTCAGAACAGACCACTACATTAGTTTATTTATGGGTTGAGAAT
CAAGACATGTTGAATTCGACAAATGCTAACAAAGCGTGGGGTAAAATAAG
AGACGCAGTTAACAAAGTAAAAGGAAAGCCCAAAAACATTACAAAATGTA
AAGCCAAAATAAAAGGACTGAAAGACGCATACAAGAAGTGTAAGCAACAC
AACGAGGGAAAGAGTGGTGTTGAATTTAAGACGTGCAAATTCTATCAACA
ATTGGATCGGGTCCTTTCAGATAAACATGTGATGACCATGCCAAATGTCA
AAGAATCTGGACAATCAAAACCAGGTAATTGTTTTGTTATAGCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022799-exon-sc0000432-1491911889:134377..135825 | TCONS_00022799-exon-sc0000432-1491911889:134377..135825 | Clytia hemisphaerica | exon |
| TCONS_00022799-exon-sc0000432-1510915933:134377..135825 | TCONS_00022799-exon-sc0000432-1510915933:134377..135825 | Clytia hemisphaerica | exon |
| TCONS_00022799-exon-sc0000432-1575043694:134377..135825 | TCONS_00022799-exon-sc0000432-1575043694:134377..135825 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000432 | supercontig | sc0000432:134377..135825 . |
Blast
The following BLAST results are available for this feature:
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