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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022770 ID=TCONS_00022770|Name=TCONS_00022770|organism=Clytia hemisphaerica|type=transcript|length=554bp
GCTGAACTTTGGTCCCATTATAGGTTGAAACCAAGCTCTTCGATGTGGAT
TTCTCACATCATAAGCTTGAATACGAATCCAAGTGATATCTCTGGCAGGA
ATTTTTTTGAGTTGAACCTTTGTTCGGTAGTCTTCGTGAAGTTTGAAATA
ACCTCGATGGCATGTGATGGCTGTTTTTGGTTTGTAACCATCATAAACTT
CAACGGTGTACTGCCAAACAATGTGCTCAGAGATCCGCTGTTTTTTAACA
CCTTTCAATTTTTGAGCCTTGGGCATTATGAAGGCTAAACGATTTCCGGA
AGTTTGTTCTACTTTGAAACTGTCGACTGAACAATCTGGTGTTTGTTCAG
CGTCGCCAATCTGGATGGGGTAATATTGTTGAAAGTTGTCGTCATCATCA
CGGTAGTTGAAAATATCATAAATACCTGTGTGTCCAAAGAAACGTCCCTC
GGTCATGTATTGGATCATTTGAAACTCCCCTTCATCCAGGTTGGCAACTT
GTTGAATATAATCATGTGATCCATAAACTGTCTTCTTCAACTTCAACTCT
GGAT Run BLAST on NCBI transcript from alignment at sc0000432:218092..219556+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022770 ID=TCONS_00022770|Name=TCONS_00022770|organism=Clytia hemisphaerica|type=transcript|length=1465bp|location=Sequence derived from alignment at sc0000432:218092..219556+ (Clytia hemisphaerica)
GCTGAACTTTGGTCCCATTATAGGTTGAAACCAAGCTCTTCGATGTGGAT
TTCTCACATCATAAGCTTGAATACGAATCCAAGTGATATCTCTGGCAGGA
ATTTTTTTGAGTTGAACCTTTGTTCGGTAGTCTTCGTGAAGTTTGAAATA
ACCTCGATGGCATGTGATGGCTGTTTTTGGTTTGTAACCATCATAAACTT
CAACGGTGTACTGCCAAACAATGTGCTCAGAGATCCGCTGTTTTTTAACA
CCTTTCAATTTTTGAGCCTTGGGCATTATGAAGGCTAAACGATTTCCGGA
AGTTTGTTCTACTTTGAAACTGTCGACTGAACAATCTGGTGTTTGTTCAG
CGTCGCCAATCTGGATGGGGTAATATTGTTGAAAGTTGTCGTCATCATCA
CGGTAGTTGAAAATATCATAAATACCTGGATAATTGAGAAGGACAAGAAT
TTattatgctgaaaaatattgtttGCTTAATAATTTGTCTATGGTGATCT
TTTTACCCTGGTTAGACAAAATGTAGGGTATCGGGAATGGTAGTCAGTTC
ACACATTTCCAAAGCAATCATCACCACGATGTGTACATAGCAGGTCAGGC
GGAACAACAGTataagtggggaggctgaaggctcaaaatgagatgaaatt
cgctaggaattgaagaaaaaactgtcatttgctcaaaagtggggagcctg
aagtctccccagttttcttgcttccgccgggcctgcaTAACACATCATAA
AATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTcgcttaccg
tcgccctcgatatcttccgatacataaactcggtattgttCTAAATGGTT
GCCCGTTGAAATAAAAGATAGCACAAAACGGGCTTTTCAACTTCAACGAG
CTTCATTCTAAAGGCCTTCAATGCAAGAAGTTTAAGGGAAAATGACTTTA
TAGCTAAAATCAGGAAACTTCaaacatctgaaaaaaaaaagcaCCAAAGG
ACAATAAGTTCATTTTTTTCGTCTtcacttttcatcttcattttcgaaaa
tttattcaaatttataaGTTATTTTTCCCAGAAATGATACTGCTCTgcat
tatatttgtaaacggTATATAAATATCAGGGGCTTAAAGTAGTGCACACT
TAATGCAAAAGGACGTTGATGACGATGTTTACATACCTGTGTGTCCAAAG
AAACGTCCCTCGGTCATGTATTGGATCATTTGAAACTCCCCTTCATCCAG
GTTGGCAACTTGTTGAATATAATCATGTGATCCATAAACTGTCTTCTTCA
ACTTCAACTCTGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022770-exon-sc0000432-1491911889:218092..218512 | TCONS_00022770-exon-sc0000432-1491911889:218092..218512 | Clytia hemisphaerica | exon |
| TCONS_00022770-exon-sc0000432-1510915933:218092..218512 | TCONS_00022770-exon-sc0000432-1510915933:218092..218512 | Clytia hemisphaerica | exon |
| TCONS_00022770-exon-sc0000432-1575043694:218092..218512 | TCONS_00022770-exon-sc0000432-1575043694:218092..218512 | Clytia hemisphaerica | exon |
| TCONS_00022770-exon-sc0000432-1491911889:219424..219556 | TCONS_00022770-exon-sc0000432-1491911889:219424..219556 | Clytia hemisphaerica | exon |
| TCONS_00022770-exon-sc0000432-1510915933:219424..219556 | TCONS_00022770-exon-sc0000432-1510915933:219424..219556 | Clytia hemisphaerica | exon |
| TCONS_00022770-exon-sc0000432-1575043694:219424..219556 | TCONS_00022770-exon-sc0000432-1575043694:219424..219556 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000432 | supercontig | sc0000432:218092..219556 + |
Blast
The following BLAST results are available for this feature:
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