TCONS_00022674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022674
Unique NameTCONS_00022674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length342

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022674 ID=TCONS_00022674|Name=TCONS_00022674|organism=Clytia hemisphaerica|type=transcript|length=342bp
TTCGAATATTCTTTTTGCCAGCATTtaacaaattcttttttttgattttc
aacaatttcaagATTGTCATAGAAGTTCATCAAATAATTATAAAACATAT
GATGAGCAAAATTTTTGGGTAAAAGCTGATCTGTTTCGTTTCTTGTTATC
TTTTCCATTGATTGACTCTACATAACTTGTTTTTATGGTTGCACTTTGCA
AACACAAATTTATATCGTGGTATGCACAAAGCTTTGATTTGTGTGGATTA
ACTGCTGTGTGGAACCTATCCCCACACACAAACGTTCGCTTCTCTCCAGA
TAATGGATGTTCAAATGGACCAAAATTGGATCGAATTGTAAC
Run BLAST on NCBI

transcript from alignment at sc0000430:62696..63037

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022674 ID=TCONS_00022674|Name=TCONS_00022674|organism=Clytia hemisphaerica|type=transcript|length=342bp|location=Sequence derived from alignment at sc0000430:62696..63037 (Clytia hemisphaerica)
GTTACAATTCGATCCAATTTTGGTCCATTTGAACATCCATTATCTGGAGA
GAAGCGAACGTTTGTGTGTGGGGATAGGTTCCACACAGCAGTTAATCCAC
ACAAATCAAAGCTTTGTGCATACCACGATATAAATTTGTGTTTGCAAAGT
GCAACCATAAAAACAAGTTATGTAGAGTCAATCAATGGAAAAGATAACAA
GAAACGAAACAGATCAGCTTTTACCCAAAAATTTTGCTCATCATATGTTT
TATAATTATTTGATGAACTTCTATGACAATcttgaaattgttgaaaatca
aaaaaaagaatttgttaAATGCTGGCAAAAAGAATATTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012739XLOC_012739Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022674-exon-sc0000430-1491911889:62696..63037TCONS_00022674-exon-sc0000430-1491911889:62696..63037Clytia hemisphaericaexon
TCONS_00022674-exon-sc0000430-1510915933:62696..63037TCONS_00022674-exon-sc0000430-1510915933:62696..63037Clytia hemisphaericaexon
TCONS_00022674-exon-sc0000430-1575043694:62696..63037TCONS_00022674-exon-sc0000430-1575043694:62696..63037Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000430supercontigsc0000430:62696..63037 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top