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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022659 ID=TCONS_00022659|Name=TCONS_00022659|organism=Clytia hemisphaerica|type=transcript|length=636bp
gggggggcttctTTTTTCACATGCTCAAAAGTTCCTCAAAGAaggtacaa
aaagaaaaattccgCTTACATTTAAATCATAAGGCTTTTATTCCTCCTCT
TGTCCTCCAGGCTTCATGCTTATACAAGGATGTGTCGTAGTATAATACTG
TCTATAGCTTTCCATGCCTATAACAACCGATGATAGCAGGTTTATCTCCC
CTTATATAAAGcccatttttgttttaaaatcgaGTCAACAGTATCTAAGA
CTTAAGTATATGGGTTTTTATATTCTATGTACTACattatataaaagcaa
aaaaattacctGTCGAGTCGAATTTAGACACCATGCCTGACAATCAGACA
GGTATTATAGAATTGTAATGGTGCAAATGCTTTAATTAAATTAGTCAACA
AACTAAAAATGTGAAAGTGACGAATTAAGTAAAAATAATCTTTGATACGA
TGTGGTGGATAGGTCGACATATTAGATTAAAAGAGAGGAATGGTATTCAG
ATTAGGTTTTAACAGCAATAATAGCTTAGTTCTATTTCTATAATTTTTAT
GTTGTATGggattctctttttctttttagtagTAGACATCAGATGTTGTT
AATAAAATGTTTTGGTGTTTGGTGATTTAGAAGctc Run BLAST on NCBI transcript from alignment at sc0000430:168555..169646+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022659 ID=TCONS_00022659|Name=TCONS_00022659|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at sc0000430:168555..169646+ (Clytia hemisphaerica)
gggggggcttctTTTTTCACATGCTCAAAAGTTCCTCAAAGAaggtacaa
aaagaaaaattccgCTTACATTTAAATCATAAGGCTTTTATTCCTCCTCT
TGTCCTCCAGGCTTCATGCTTATACAAGGATGTGTCGTAGTATAATACTG
TCTATAGCTTTCCATGCCTATAACAACCGATGATAGCAGGTTTATCTCCC
CTTATATAAAGcccatttttgttttaaaatcgaGTCAACAGTATCTAAGA
CTTAAGTATATGGGTTTTTATATTCTATGTACTACATaaaggagatgcac
gaacaagcaaagaaacttaacaaagacAATAGGAATAAAGACTTCAACTG
GCGCGTtagaggaagcccaagaacaaaactacgaatcgttaaaaaattac
aaaaccaaacaaaaatatcttcaaattataaacNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattttgtaaaataggcagt
cgaactctattagctttaaagctagtacatttttgtacactttttttcga
ctttaaagaatatacacattaacattaacattaacattaacattatataa
aagcaaaaaaattacctGTCGAGTCGAATTTAGACACCATGCCTGACAAT
CAGACAGGTATTATAGAATTGTAATGGTGCAAATGCTTTAATTAAATTAG
TCAACAAACTAAAAATGTGAAAGTGACGAATTAAGTAAAAATAATCTTTG
ATACGATGTGGTGGATAGGTCGACATATTAGATTAAAAGAGAGGAATGGT
ATTCAGATTAGGTTTTAACAGCAATAATAGCTTAGTTCTATTTCTATAAT
TTTTATGTTGTATGggattctctttttctttttagtagTAGACATCAGAT
GTTGTTAATAAAATGTTTTGGTGTTTGGTGATTTAGAAGctc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022659-exon-sc0000430-1491911889:168555..168839 | TCONS_00022659-exon-sc0000430-1491911889:168555..168839 | Clytia hemisphaerica | exon |
| TCONS_00022659-exon-sc0000430-1510915933:168555..168839 | TCONS_00022659-exon-sc0000430-1510915933:168555..168839 | Clytia hemisphaerica | exon |
| TCONS_00022659-exon-sc0000430-1575043694:168555..168839 | TCONS_00022659-exon-sc0000430-1575043694:168555..168839 | Clytia hemisphaerica | exon |
| TCONS_00022659-exon-sc0000430-1491911889:169296..169646 | TCONS_00022659-exon-sc0000430-1491911889:169296..169646 | Clytia hemisphaerica | exon |
| TCONS_00022659-exon-sc0000430-1510915933:169296..169646 | TCONS_00022659-exon-sc0000430-1510915933:169296..169646 | Clytia hemisphaerica | exon |
| TCONS_00022659-exon-sc0000430-1575043694:169296..169646 | TCONS_00022659-exon-sc0000430-1575043694:169296..169646 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000430 | supercontig | sc0000430:168555..169646 + |
Blast
The following BLAST results are available for this feature:
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