TCONS_00022656 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022656
Unique NameTCONS_00022656
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022656 ID=TCONS_00022656|Name=TCONS_00022656|organism=Clytia hemisphaerica|type=transcript|length=118bp
atgaaATCCCTCCAGATGTTTGCTTACAGATTGGATATATGTCGCCGAAA
TCTGGTTATAATTTCAAGAAGGGTTATAAGAGTTGTTTAGATGGATGGAA
GTTGGAGGGTAGAAGAAG
Run BLAST on NCBI

transcript from alignment at sc0000430:66632..67055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022656 ID=TCONS_00022656|Name=TCONS_00022656|organism=Clytia hemisphaerica|type=transcript|length=424bp|location=Sequence derived from alignment at sc0000430:66632..67055+ (Clytia hemisphaerica)
atgaaATCCCTCCAGATGTTTGCTTACAGATTGGATATATGTCGCCGAAA
TCTGGTTATAATTTCAAGAAGGTAACTATTTTGATAAATCATCAGTCGTA
CAAAATTACTGATTGGCTTTGAGGAGTGCCTATAACCGTTAAACGCACCC
GAttaccatttttttaatttttttccaataaaaACGAAAACATAATTAAA
TATAGCATCATATCCTAAGCTTTTCTTAGTTTTAACTTTTCATTCGGCCA
AAAAGCATGATTACTAGTACAAACTAGtacaattttatttatttttaatg
atttttaaatttttctcttttagtgATAGCATGTCATTTTTTAACGTTGA
AATTTATAGTACTCTTTTTTATCTCAGGGTTATAAGAGTTGTTTAGATGG
ATGGAAGTTGGAGGGTAGAAGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012725XLOC_012725Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022656-exon-sc0000430-1491911889:66632..66702TCONS_00022656-exon-sc0000430-1491911889:66632..66702Clytia hemisphaericaexon
TCONS_00022656-exon-sc0000430-1510915933:66632..66702TCONS_00022656-exon-sc0000430-1510915933:66632..66702Clytia hemisphaericaexon
TCONS_00022656-exon-sc0000430-1575043694:66632..66702TCONS_00022656-exon-sc0000430-1575043694:66632..66702Clytia hemisphaericaexon
TCONS_00022656-exon-sc0000430-1491911889:67009..67055TCONS_00022656-exon-sc0000430-1491911889:67009..67055Clytia hemisphaericaexon
TCONS_00022656-exon-sc0000430-1510915933:67009..67055TCONS_00022656-exon-sc0000430-1510915933:67009..67055Clytia hemisphaericaexon
TCONS_00022656-exon-sc0000430-1575043694:67009..67055TCONS_00022656-exon-sc0000430-1575043694:67009..67055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000430supercontigsc0000430:66632..67055 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022656 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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