TCONS_00022646 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022646
Unique NameTCONS_00022646
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022646 ID=TCONS_00022646|Name=TCONS_00022646|organism=Clytia hemisphaerica|type=transcript|length=196bp
GGATCACTCAATTATTATTCTTTACTAGCTAGAGAAGAAGCCAATCACCA
TTTGATCCAAGCGCTAGAGAAGTCGAGGTATTAAACATTTCATCAAACAA
AATGAAGACGGCTACCATTTTGGCAGGTGTTGTTGTTTGTTTACTGGTAA
CCATGGCAAACACAAGAGCTTCTCCTCGAACCTGGTTATACGAGGt
Run BLAST on NCBI

transcript from alignment at sc0000429:3544..3739

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022646 ID=TCONS_00022646|Name=TCONS_00022646|organism=Clytia hemisphaerica|type=transcript|length=196bp|location=Sequence derived from alignment at sc0000429:3544..3739 (Clytia hemisphaerica)
aCCTCGTATAACCAGGTTCGAGGAGAAGCTCTTGTGTTTGCCATGGTTAC
CAGTAAACAAACAACAACACCTGCCAAAATGGTAGCCGTCTTCATTTTGT
TTGATGAAATGTTTAATACCTCGACTTCTCTAGCGCTTGGATCAAATGGT
GATTGGCTTCTTCTCTAGCTAGTAAAGAATAATAATTGAGTGATCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012715XLOC_012715Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022646-exon-sc0000429-1491911889:3544..3739TCONS_00022646-exon-sc0000429-1491911889:3544..3739Clytia hemisphaericaexon
TCONS_00022646-exon-sc0000429-1510915933:3544..3739TCONS_00022646-exon-sc0000429-1510915933:3544..3739Clytia hemisphaericaexon
TCONS_00022646-exon-sc0000429-1575043694:3544..3739TCONS_00022646-exon-sc0000429-1575043694:3544..3739Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000429supercontigsc0000429:3544..3739 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022646 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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