TCONS_00022640 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022640
Unique NameTCONS_00022640
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2507

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022640 ID=TCONS_00022640|Name=TCONS_00022640|organism=Clytia hemisphaerica|type=transcript|length=2507bp
tagaaacaaaagaaatttgagacattaaaaaaagcaattaaCTGATTTTG
ATATCAGATCAATTGCATCTAGAAAAGCTTTATCAAGATTATCAAAGGGT
GATTTCTTAGTATTATTTGTGCATCGTGTTGTGTTGCATGTTCAAATTGG
ATATTTGTTGTCGTTTTGCTACAAATTTGAATTCGTTTTGGAAGGTTTTC
GAAGTGAACCTGTATTACATACCCTTTGGTGAATAAAACATTATTGATGC
CTCCGGTCAAAGATTTATCTTCTGCTCCCAGTGAGCCTGAATTGTTGGCC
GAACTCCAAAAACAACAATTAGAAGATTCTCAAATCGAGACAACATcatc
acccaaaaaagccgTACCGCCACCTAAAGCACCCAAAAagactgaaaaag
aaaaaccagTCCTCAACTCACCGCCCGTACGTAAGAACCGTAAATTATCC
GCGATGACGGCTAACGGAGAAACCGAAGAGCCCATAAGCGTCACCTTTGA
AGATATCACGGCAGCTGCTTTCCGTATCAAGAATGGAATACGTGTTACCC
ATGTACGAAATCGCATCGTTTGTCGGAGATGCTTGGTATGGAAGTGTTTT
TGAAACGAGATTACATGCAAATCACCGGAAGTTTTAAAGAAAGAGGAGCT
CGAAATACATTAATGATGCTCTCAAAGGAACAAAAAGCTCGCGGTGTTAT
TGCTGCTTCGGCTGGCAACCATGCTATGGCGATGGCATATCACGGAAAAG
AGCTCGGTATCCCGGTTACCGTGTGTATGCCCGTGAACGCACCAATCACG
AAAGTCTCACGCTGTGAGAAACTAAAAGCACGTGTCTACAAGTACGGTGC
TGATATCATTCAGGCTAAAGATTACGCTTTGGAAATCGCGGCTAAAGAAG
GTTTAGCTTATATCAATGGTTACGATCACCCAGACATTCTGGCAGGTGCT
GGAGCATGCGCATTAGAATGTATTGATCAAGTGGAAAACATCGATGCAGT
GGTCATTCCTATTGGTGGTGGTGGTCTTATCGCTGGATGCTCTGTTGCTT
TTAAATCACTCAATCCTAACATTGAAGTCATTGGTGTGGAAAGCGTCCGC
TGTGCCAGCTACAAAGCTGCTCTAGAAGCAggaaaacctgtcaaaattga
AGTGGACCAATCCATGACTCTTGCTGATGGTTTATGCGTACCAAAGATTG
GCTCGAACGCTTTCGAAACAGCTCGTTCAAATGTTGATAAATGTGTCACA
GTAGACGAAGCTTACATCGGTTTAGCAGTATTGCGTCTTGTCGAAGAAGA
GAAATGCGTGGTAGAGGGAGCCGGTGCTACTGGGCTAGCTGCTGCTCTGG
CTGGCAAGTTGGACCATTTGAAAGGAAAACGTGTTGTATTCACATTATGT
GGTGGTAATATCGATTCCACAGTCCTTGGGCGTGTCATTGAGCGTGGTTT
AGCTGCTGATGGGCGTATGTTGAGGTTCTCAGTTGTCATTTCTGACCGCC
CTGGTGGCTTGGCTCATTTAACCAAAGTCCTTGCCGATACTGGAGCAAGt
gtCAAAGATATCCTTCATGAAAGAGCCTGGCTGAAAACTAGTATCTTCCA
AGTCGAGAACAAAGTGGTGTGCGAAGTTCGTGACGCGGAACATGGTGCTC
AACTGAAAAAAGTTTTAGAAGAAAACTTCGACCAAGTACGTTTCTACACT
TACCATATCTAATTCGTTCAAAATGTTTGGTTGGTCACCAATAGTACTGT
TGTATGAAGAAATTGACGAAGATTTGGTTAACGTAAACATTATTCAAAAG
ATCGCCAGATGGGTTCATTCAATATATGAATATTTTCTAGCGAAACTTTT
ATTGTCAGATTCCCACTGCACTGCTACTCTTGTTGGTCTTTTTGAGAAAT
CTCAGGACTACCAAATCAACGTGTCACTATCGCAAATATTATTGTTGTAG
GTAAAGACCAGGCCATTTAATCGAAGTAAGATCTCTAATTGTTAGCGAGT
GCTTGACTAAAGCATATGCCAGTTATTAATGTAGATAGGGCTCAACATCT
TTTTTTGGATAAGGGTGATGTTACTGATAGTTACAATTTCTTACATGTGA
ATAAAGACTGGCCGTTCTCTCTTAAGTTCTTCCACACACAGTATTACCAT
TTAATTATTCTTATttgaaaaaagcttgtaaataggattttattttttgt
ttttgtttcgatgaatTATGACatatttaccccctgaaaatgttttttta
atgacaatgcaatggtttgtaaaaaataaaattattttaaaaaatacatc
aagtaaaactgaaaatatttcacTAAATGTCATTTTCTTTACTCTTAACG
ACCCCTTcccacagacccggtaggatattttcagccagtagggggtaaaa
ataacggactgaaataTTAACAATAACAATATATGCAGCGAGGGTTTgtt
tctttgattattttcagtggggacaaaaactggggtataattttccactg
ggacgat
Run BLAST on NCBI

transcript from alignment at sc0000429:216063..227117-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022640 ID=TCONS_00022640|Name=TCONS_00022640|organism=Clytia hemisphaerica|type=transcript|length=11055bp|location=Sequence derived from alignment at sc0000429:216063..227117- (Clytia hemisphaerica)
TAGAAACAAAAGAAATTTGAGACATTAAAAAAAGCAATTAACTGATTTTG
ATATCAGATCAATTGCATCTAGAAAAGCTTTATCAAGATTATCAAAGGGT
GATTTCTTAGTATTATTTGTGCATCGTGTTGTGTTGCATGTTCAAATTGG
ATATTTGTTGTCGTTTTGCTACAAATTTGAATTCGTTTTGGAAGGTTTTC
GAAGTGAACCTGTATTACATACCCTTTGGTGAATAAAACATTATTGATGC
CTCCGGTCAAAGATTTATCTTGTAAGTATTGGATTTGAATCTATCATTAT
CATTAAAGGGCCGAGATCATTCGGAAGGAGCGCTGGGAGCCTTTCTACTG
GTTAAAGATGACCTTTCGCAATCAACCAATAGAATAGTTCTAATTCATTT
CTAAACGGTCTAGCCTAGATATCCAGTTTGGTCTAGCCTAGATATCCAGG
CTAAAAACTTTGTTTTTATTCAGATGTTTCTGGTTTACCGCCTGCAGCGC
ATGCGTGCTTTGTCGATTCGATTATTGCGTGAAGCTATAATTTTGTCGAC
CCTTGCGTTACAAGCATCTGCCAATAAAACCAGAAACATTAAAATAAGAA
AGAACTTGCAGCTTGGAGATCCAGGCTGGGAAAGGGTCCAAAAGTTCTCT
TTAATTTTATCCGCGATATTTTAAAGCCCTCTCAAGGTGAATTCACGCTC
CGAAACGATTTTAAGCAAGCGATTTCTTTATAAATAGGAACGGTTACTTT
ATTCAAAATGACTGCACAATAATTTGTGAAGCTCAATACGTATTTAAACC
GCTAACTATCTGCTTCTTCTTGGATTGGCCTAATCTTGGTGATTTTCGGT
AATCAATTATGTAGCACTTGGTAAAGGCGATGTGAGAAGTTTAGATTCGA
ATGAGCTCTTTCGCAAACCACAGCCGCTTTGAAAAATCTCACCTTGTCAA
GAGTTCTAGAGGAAAAAAACGGCGAATTGAAAAACCGGTTACGTTAGGAG
ATTAAAGAAAACGAGTTCGGTTTGATATTTAATTAAGTCGTATCATTAAA
TGTATTAATGTCAGTTTGCCATTGTGCTCTAAAGAGCTGTGATAGAAAGA
CGGTTGGTTTCTGCTGCTGAAAATTTTATATGATTGAAAAATATTAGGAG
ATTTTATTTTCAAAGGCTGCTGCTGCCTTTTGAGCAATTTGAATGATTCT
TTGTTTAGTTAAAGTTAGTTATTGAGTTTAGTTAAAGTTAATACCTTTGA
AATTCTACCTATCCCGGAGAAAAGCTGTACACACTGGTCTGTACGACATG
ATTGGGGAGTAATAAAGATATCTGTGTTTTCCGACGGAAAGAATATAAAG
ACGGTCCTCCTTATATGCAGAGACTCGGTCCTTATATATAGGGACGTCCT
CCAATATAGGGGGACGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGG
TTGGTCGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGATCG
CGTCATTTTTATTACTTCAAATGACCAATTATTAAAGTATCTTATAAAAA
CTCCACCTCATCTGAATATAGGGTATCGTGCCTCATTGCTGGAGCATATT
ACAGTGAGCTTATAAGAAGTAATTTCCAGTCCCCGTCGAGAAAAAAACCT
AACTTTCTATAATAGAAAGAGAATCAGTTGTATTCTTACAGATAGTGTTC
TTATAACTAACATAACAGTGTCCCGTTAAGATACAGTCTTGATTGAAACC
CAGTTTAACATTGATAAATAAGTTATAAGGTTTTGAATAAGCGAGACATA
TGTTTTCTTTCAATGTTTTCCGCTTCTCTTTCTCGTGAATATGAACAACC
AGCTTTTTAGATTAATTTTTTTAGTTTTTTTGATATATTTTTTTCGCGTG
TAGTAGTTTTAAAAAAGGTACTGAAAACTTAAATTCTGCACTTTCTGTCG
CTTATTTAAGATTTTTTGAAAAGACAATTTTCAAAAGTTTTCATTACTTG
ACGGAGAAAATTTTGGAATGGAGTGAAGGTTTCCATGGATTTTAGGCCAT
AAGTAACAAACAAGTCTCACAGAAAGTGTTGTTCCATAAATATTCTTTCA
GACAAGACTGGTAAAGTTCCAATGATAAAATATTGTTAAATTCTGGATCT
TTTGGCTAACAGATTATGATAGCATATTCAGGCGTCCTAAAAAGGAATTC
TGAAGTTATTCTTCAATCATTTATTCTCAAATTTTAATTTAAGCTGCTCC
CAGTGAGCCTGAATTGTTGGCCGAACTCCAAAAACAACAATTAGAAGATT
CTCAAATCGAGACAACATCATCACCCAAAAAAGCCGTACCGCCACCTAAA
GCACCCAAAAAGACTGAAAAAGAAAAACCAGTCCTCAACTCACCGCCCGT
ACGTAAGAACCGTAAATTATCCGCGATGACGGCTAACGGAGAAACCGAAG
AGCCCATAAGCGTCACCTTTGAAGATATCACGGCAGCTGCTTTCCGTATC
AAGAATGGAATACGTGTTACCCATGTACGGTAAGATATATTTTACGTTTA
CTTCGTATGTCTTATTACAGTGGAGTCTCCGTAGCTCGAACACTCACGGG
AAATGTAAATTTATTCAAGTTAAGGAAGTTTCGAGTTATGGAATGATGTT
TTAGGGCATTGTAAACTGAAGGGAATAGAAATCTTGTTCGAGTTAAGGAG
ACATTCGAGTTATAGAGGTTCGAATTATGTAGACTTCACTGTATTTGTAA
AGCTGGAGTATATGGCGAAGGAAGGGTTATAAGCCAAATTATAATTGATA
TTTCTAAAGTTTTATGATCGCTTTGAAAGCTTGAAGTAAGTTTTTTTTAC
AAAACTGTTTCAGTTCTAAGAAGCTTGCTATGTCTCTATATTTGCTCCTA
AAATATAATCTACCATTACAAGGATTTCCCTCTTTTCTTTCCATTTGAAT
CTACTTTTTCACCCCGAGTATTTGATTTGCGAAATAACAAACGAAAAATA
TTATAAAGTTTTGAGATTTTTCTCGTTCATTGAAGGGTCTTATAAGTTGT
AATCGCCTCCGTTGTTCAAAAGCTCTACATGAAGCCTATTTCAAATGATT
ATGATTGTTATTAAATATTGAAGTAACTAAACGAAACTTTCTCTGTAGGA
ATTCCTCTCTCAGCCTGTTTGATGTTTTGATATTTTTTTCCTCGAGAGGA
GTGGAAGGAGGTGTTCCACGTTTTATCGCTCGCTATTTTAGCTCTCTCTC
TGATATTTCTTTTGACATTTCTTTTTTAGTAAGAACTCGTTTGGTTACCC
CCTACTTTAAAATACAAATAACACCCATTATGAGAAAAGTGTCCCGTCTG
AACTTCGTAAATCCATTGAGTTTAAAGCCCGAAGGGCTAGAGTAGAATCT
CTAACCTTTCCAAGGCAAGAAAAAAGTGAAGTCACTTATTTCCAATCCAG
AACGCGTCTACAACGCACTGTAATCATGACGACAGATTGTATCTAGTGGT
TCCTTTGTTTCGAGGACTGCATTTTTTGAAATCTAGCGATAGATTTTAGT
TTCAATCCGGCGTGTGTGTAAAAACCACGCGCAGGTGTTCTAGATGGAAA
ATAAGTGGTTTCATTTCCCACCCAGGAGTATCGAGTCCAGCCCTTCGGGC
TTGGAAGTCAATGCATAAATCTCTGCATGTGGATGTATCTACCTTGCCTG
AAGTGAATAAATCGCTAAAGAGGATTTTAAATAAAGTTGTATTCAAAGTC
TTATTTTAAAAAACTTCGTTTAAAAACTCTTTCATTTCCATGATAAAAAG
AATTTTAAGCTCTTAAACTATTAAGTTGGCTCAAGATGCTAAATATTTTG
TGTGGCTCAAAGTTTTAAGCTATTAGCTCGTACTTTTGAACTAAGTTAAA
GCTCCAGACTTACTGATAAACAATGTGTAAAGCCACTTGGATTTCCAAGT
AACAAAATAGACTTTTTACCCTATTTAGAAGAAACCATGGAAGAAACAAT
GTGTCCCAAATTTAGTTTTACTGTCGAATAATAATTGCAATCTAGATCAC
TTCACCTGACAGTCACTTGACAAAATTAAAAATCAAAATTATGCGATAAA
GTGGCTTGGAAGTGATAAGCATATATCCAATCTATGATTGTCCTCACGCA
ACGAAGGCGACCCAAAGGCTCTTTCTTCTATCTATCTATCTACCTGAAGG
TGAGGGGGGAGCGCCAATCTTTCTCCCTGGATTGCTCCACTTACCTTTGA
TCCTTCTCAAAAGGCACCAAGTCCCGGGGGGGGGGCTTTGAAATCAGACC
CTTACAGTGCAGAGAAAATTTTGCAAAGTTTGAGAAAATTTGGGCGGTAA
ATCGACCTTTACGGTGCATTTTCTTGAAAAAAATGTTCAGATTTTCCAAA
AATGTTACACCCTTAAAGTGCATTTTTCTCCTTTTTGCTGATTTCGACCC
TTACAGTGCATTTTGGGAAGCTCGGAAAATATACCCGCACGTATCGTAGG
TCCATTCTCCTTGAGTGCCCCCCCCCGGTTATCAAGTACCATGTTGGTTA
TTTCTGGTATGATCAGGCCAAGGATTGAACTGGGACCCCATCCCCACTGG
AAAATTTGGCAAAAATTTGGTTCCCTGGAATTTCAGCCCCGCTGGGAAAT
TGACTTTTATTTTATCCCCACTCGAAAATCAATGTCTAAAAATCGCACTT
CAAAACCATCCCCACTGGATTTTTAAACCTTTGAACAATTAAAATTTCTA
TCCCCATTGGAATTTCAATAGGAATTTTTATCCCCACTGAAGACAAAAGT
TCCACCGGGGCTGTGAGACAGGGGTGTTTTTAGGGAATTCTAGTCTCCTG
TCAATGAAATCTATAATTGGACATGCAAAAAAAATTTGAAAGAACCTGAA
CTTTTAAGGTATATTGCAGATAGCACGTTGGGCTTTGGGCATTTACATTT
CCTTCAACACTAATATACTTGTTTTTTTAGAAATCGCATCGTTTGTCGGA
GATGCTTGGTATGGAAGTGTTTTTGAAACGAGATTACATGCAAATCACCG
GAAGGTAGCTCATACATCTAAATCTAATGGAAATAATATGTGCTAATCAC
ACTAAAATGAAACAAGATCTCCACCGATTCCTTATTCCCACAATATGGCT
TTATCTCTTAAGTTTTCTAATTGATAGGTTTACCTTTTCGGCCCTTTTTA
CGCCGGTTTCTTTTACGTCGGCCCTTATTACGCCAAAGTCCAATTTTTTC
CATCTTTAGCCCTGTCCTAATTTAATTCGGTCCCTTATGCCGACCCTTAC
AATGCCAGCGACGAAAAAAAAGCCCATAAGAAAGAGCCGGCGTAAAAAGG
GCCGATAATCAAGTCATTCTAATTCGAATCTTTATACAAATTAAAAGCTC
CTTAAAGGTCGAATTATACAACGTCATCTGCGAGTAACTTTAAAATTTCT
TCTTGTCTCTTCTTTAGTTTTAAAGAAAGAGGAGCTCGAAATACATTAAT
GATGCTCTCAAAGGTAAATTCTTTTGCTGCCTGAATGAATCATTTCTACC
TTCTCCCATAATACTCTATAGTGTACAGTGTGTCCGGAAAAAATTGGGAC
CAAACTTTTACAGTTCTAGAAGTCTCTATTTTTTTAACGATCATTGTTAA
CTGATCACTGTTCATTTAAAAGATATCAAATTCCAAAGCGTTTCCCTCTT
TGTTGCCTTTGTTTTTCAAATGTACTTTGATACTTAAATATGTCGGGAAA
ATTCTGCTCCGCACTTTTTCCGGACACACTGATTTGTCGTATCTTATTAC
TAAACATTTTCATTGTGCACTTCCACTATAATTTAAAATCAGTGTTCGAA
GCTCTTCCGTCTCAGTGAATTATATGAAGGGCTTTCTCGCCTCAAAATTC
TGTACAATTCACCGAAATTTCTAAAATATGTGCTAAATCGCCATGAAAAA
TTCATTTTCGTCTCGGACAAAAAGTCTTGCTTTGACCACTGAATTCAATG
TACCTGAATATTTTCTTCTATTTATAGGAACAAAAAGCTCGCGGTGTTAT
TGCTGCTTCGGCTGGCAACCATGCTATGGCGATGGCATATCACGGAAAAG
AGCTCGGTATCCCGGTTACCGTGTGTATGCCCGTGAACGCACCAATCACG
AAAGTCTCACGCTGTGAGAAACTAAAAGCACGTGTCTACAAGTACGGTGC
TGATATCATTCAGGCTAAAGATTACGCTTTGGAAATCGCGGCTAAAGAAG
GTTTAGCTTATATCAATGGGTAAGTGTTTGTGATTTTCCCAAAAAAAAAA
AACTTTTTGCGCACCTGGCCTACAAAAAAACCAGTTGGTCAAAATGAACT
TCAGGCGATCATACACATAACAATAACATACGTTGCACATCCGCCAAACG
TATTCCAAAGGACGGTTTTAAACTGTAGCCAAAACCGGGAAATCGTGCTT
TGAAATTATGAGACCCTGAGAATATCTTACTTTTAAAAAAATTTAATTAA
TAAGAAGTTTTCTCGGAAAGGGCGTGACTAATTTGAAAATTTTGTGACGT
AGTTAATACTATGTTTGACTCGTCCACTCCTTCTATCATTCTAATATGTT
TTAATATGTTTCCTAGTTACGATCACCCAGACATTCTGGCAGGTGCTGGA
GCATGCGCATTAGAATGTATTGATCAAGTGGAAAACATCGATGCAGTGGT
CATTCCTATTGGTGGTGGTGGTCTTATCGCTGGATGCTCTGTTGCTTTTA
AATCACTCAATCCTAACATTGAAGTCATTGTAAGTAAATTGTGGTTGTAT
ATTATGGGGGATGGGAAAGAACTTTCTTATTCCAAATTAAACAGGAATTC
TGAGTATACAGAGAATTTTTAAAATGATATGTATTACTTTATTTAGCCTT
TCACGATGTCGAAAAATTCACGGTATCTCAAATAGTTAAACATTGAGAAT
TTTTGAACGGAAATTGGCTTTTAGTAACAAATATTCTTAAATTCGGCATC
TATAAAAGTTAAAACTTAAGAACTTTTTTCACGTGTACATGTTTTTTTTT
AATAAGCATTGCACTTATAAGCATATCTAGGCACAGATATGGGGAAAATT
AAGCATATGGCAAGCATTACTTGAGCCTACGAAAAATGTTTTTTCCTGAT
TTTGGCTTTTTTTGGCTGGAATTTTACGGATTTTCAGTATTTCCCTAAAT
TTAAGCTTAAGATTTCAGCCTTATTAAGCTTTCGACCTAAGCATCTCTGA
GCCTCTTTTCGGATTTTTGTATGCTTATAAAAAAAAACATGTATAAATTT
TCGCCGCTCTTTGCCTGGGATAGATAAAATTCCACTGGATAGACACTGTC
ACATATCATAGATGAGGTTTTGCGCCGTTTGTGAGGATTTGCAACTCCCC
ATTTTATTCATCTTTTTCTATCGTAGGGTGTGGAAAGCGTCCGCTGTGCC
AGCTACAAAGCTGCTCTAGAAGCAGGAAAACCTGTCAAAATTGAAGTGGA
CCAATCCATGACTCTTGCTGATGGTACGTTTATGCTCTTGAAAAAATTAT
TTCAGTGTTTCTGATTCTTCGTCTCGGAGAGTCGTGTTATGATCTCAATC
AAAGAGATTTCATAATTCCAAGGCGCAAACAAACACTGTAGTCTCACTGC
ACTAAAACACTGGTCTAGAGTGCTCACTGGTGAAATACTAAAATTTCACA
TCAAATCTGTTGATAATAATAAGACATGGTTTATCTTTCTACAGGTTTAT
GCGTACCAAAGATTGGCTCGAACGCTTTCGAAACAGCTCGTTCAAATGTT
GATAAATGTGTCACAGTAGAGTAAGTCAAATTCAGAGTTTCCTTTAGACT
GGAGTCGAGTTTAATACGTAATATAGTATAGGTTTTGTATGGATAATACG
AAAATTGAAAGAGAATTTAGACCCTAAACTCAAGCTTAGAAACAACAATT
AAAAAACCTAATGCTTTCATTTTCAGCGAAGCTTACATCGGTTTAGCAGT
ATTGCGTCTTGTCGAAGAAGAGAAATGCGTGGTAGAGGGAGCCGGTGCTA
CTGGGCTAGCTGCTGCTCTGGCTGGCAAGTTGGACCATTTGAAAGGAAAA
CGGTACAGCGTTTTTTTATTACAAATTCTAATACAAGAGCACTGTTATAA
GAATTTTTTTGTACACCTCTTTCTCACAGACCCGGTAGGATTTTTTTCAG
ACAGTGGGGATAAAAATAACGGACTGAAACTCGATGGAGATTGGTATTCC
AATATTTCTTATACCTGGGGATTTCAATTCTTTTGTTTTCAAGTCAGAAA
ATTCAGCAGGGATGGAAAGAATAGCATAATGTTTTGCAGTGAAGATTAGT
TTATTTGATTATTTTCAGTGGGGACAAAAATTGGAGAATAATTTTCGACC
GGGGACGATTTTTCGGAAAATTTTTTCCAGTGAGGGTGTCTTTGTGATAA
AACTCTACATTTTTCTATAAGAAAAGAAAACGAAGTGTGCGTTTGTCTCT
CATGTTCGAGTAATGGAGGTACCAATTTACTACGCGCTTTATTTTATATA
AACAATTTTGTAAGAACACGAGGTTAAAAATTGACCAAAACACTCAGAAC
GAATTAAGAAATTCTGAGCATCGGATTCCCGAAATGCTAAGAAAGTAACA
AATTTTAAACCCATTTCAAGTTTTTAAGTAAATAAACTACGTGTATTAAG
AACATCGTAAGAACATATAAGCCTTAAAATTTCAATAAAAATAAGAACAG
CCCAGCCAGAGCCAAAATTTACTGGTTCTTATAAAAAAGCGTGTATTAAG
TAACCTTTTAAAAAAACCTTTCCTACTTCTAGTGTTGTATTCACATTATG
TGGTGGTAATATCGATTCCACAGTCCTTGGGCGTGTCATTGAGCGTGGTT
TAGCTGCTGATGGGCGTATGTTGAGGTTCTCAGTTGTCATTTCTGACCGC
CCTGGTGGCTTGGCTCATTTAACCAAAGTCCTTGCCGATACTGGAGCAAG
GTGAGTTATCAGTTTTCATATTGGGTTTTTCCAGAAAAATAAACTGTCTT
CACCCTGTTAAGGAGTTCCGTTTCTGTATTAAGGTTTAATATGTGGTGGA
ATTTCATAGGGATATACAAAAATCTGTCAAAATAACTGGAATTCCTAAGG
AGTAACTTTCCAGAGGGGTTTGGACCTAAAATTGCCTGGAATTCCAGGGA
TACAGCATGTTCAGCTAATAGGGTTGGACCTCCTCACAGTTTTTTTCCTC
GAAAAGTCCATTTACCTTAACTCAATTTAATCGTTAAAAGGTGGGGCCCA
AAGTTTTAACAAAGCAATCCTCCTCTTTATGAAGTCTAAAGAGACTCTCA
ATCTTTGAGACCTTTCCTTACACTTATCATCGAAATCAAAAGATTGAAGA
GGCTAAAGAGAGGGGCAAGAGAGGGGTGGTAAATTGAACCATGTTTTAGG
CAACTGAATCATAACTTAATTTTCTTCTTTTTTTTCAGTGTCAAAGATAT
CCTTCATGAAAGAGCCTGGCTGAAAACTAGTATCTTCCAAGTCGAGGTGA
GAAACTTGTGTTTGCTTCTGTCATCTCACTTTAATTTTTTTCGCAGGCTC
AAATTTCGTGTTTTCATGGAATTTTATCTCGCAAGTACGCTTTATTTGGT
TTACTCCCAGAAAAAAATTCTCTCAAAATTTTTAAAATTCTATACTCCGA
TTGAAAACGACTTAGAATATTCGATTTTTATCCTTTTTACAGTGACAAAA
GCTACTAGTCCGTAACTGCGAACCCAGCCGTATTTTTTAAATTTCCCTTG
CGAGTATTTCGAATTTTTATTAAATCTTGTGCTTAACTCCTTAAACTCCC
ACAATCGAAATTTTGGTCTCTCGGAAACGATATTTTCGGCTGCCGGTAGT
TTTGATTGATGACCTAATTCAAAAATCTGACTGAAATCTGATGCAGAAAA
GATTTTAAGGAGCTTTTAAGGAGCTTTCCAACGGTACCAAACATAAAGGG
TTTAGCTATCACTAAAGCTGAGATAATTCGATTTAAAGTTTAAGCATTGA
AAAATCTTTAAAATGCGATTTTTTAGCTTTTCGAGAACGTCAAAGAGTTA
AACTAAAAATAATTTGATTCCCTTTTGCTATACATGTGTGTGACTGTTCG
TTTAGAACAAAGTGGTGTGCGAAGTTCGTGACGCGGAACATGGTGCTCAA
CTGAAAAAAGTTTTAGAAGAAAACTTCGACCAAGTACGTTTCTACACTTA
CCATATCTAATTCGTTCAAAATGTTTGGTTGGTCACCAATAGTACTGTTG
TATGAAGAAATTGACGAAGATTTGGTTAACGTAAACATTATTCAAAAGAT
CGCCAGATGGGTTCATTCAATATATGAATATTTTCTAGCGAAACTTTTAT
TGTCAGATTCCCACTGCACTGCTACTCTTGTTGGTCTTTTTGAGAAATCT
CAGGACTACCAAATCAACGTGTCACTATCGCAAATATTATTGTTGTAGGT
AAAGACCAGGCCATTTAATCGAAGTAAGATCTCTAATTGTTAGCGAGTGC
TTGACTAAAGCATATGCCAGTTATTAATGTAGATAGGGCTCAACATCTTT
TTTTGGATAAGGGTGATGTTACTGATAGTTACAATTTCTTACATGTGAAT
AAAGACTGGCCGTTCTCTCTTAAGTTCTTCCACACACAGTATTACCATTT
AATTATTCTTATTTGAAAAAAGCTTGTAAATAGGATTTTATTTTTTGTTT
TTGTTTCGATGAATTATGACATATTTACCCCCTGAAAATGTTTTTTTAAT
GACAATGCAATGGTTTGTAAAAAATAAAATTATTTTAAAAAATACATCAA
GTAAAACTGAAAATATTTCACTAAATGTCATTTTCTTTACTCTTAACGAC
CCCTTCCCACAGACCCGGTAGGATATTTTCAGCCAGTAGGGGGTAAAAAT
AACGGACTGAAATATTAACAATAACAATATATGCAGCGAGGGTTTGTTTC
TTTGATTATTTTCAGTGGGGACAAAAACTGGGGTATAATTTTCCACTGGG
ACGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012713XLOC_012713Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022640-exon-sc0000429-1575043694:226847..227117TCONS_00022640-exon-sc0000429-1575043694:226847..227117Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:224589..224874TCONS_00022640-exon-sc0000429-1575043694:224589..224874Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:222064..222137TCONS_00022640-exon-sc0000429-1575043694:222064..222137Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:221605..221650TCONS_00022640-exon-sc0000429-1575043694:221605..221650Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:220849..221090TCONS_00022640-exon-sc0000429-1575043694:220849..221090Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:220339..220501TCONS_00022640-exon-sc0000429-1575043694:220339..220501Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:219595..219691TCONS_00022640-exon-sc0000429-1575043694:219595..219691Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:219298..219373TCONS_00022640-exon-sc0000429-1575043694:219298..219373Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:219016..219141TCONS_00022640-exon-sc0000429-1575043694:219016..219141Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:218118..218285TCONS_00022640-exon-sc0000429-1575043694:218118..218285Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:217572..217629TCONS_00022640-exon-sc0000429-1575043694:217572..217629Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1575043694:216063..216962TCONS_00022640-exon-sc0000429-1575043694:216063..216962Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:226847..227117TCONS_00022640-exon-sc0000429-1510915933:226847..227117Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:224589..224874TCONS_00022640-exon-sc0000429-1510915933:224589..224874Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:222064..222137TCONS_00022640-exon-sc0000429-1510915933:222064..222137Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:221605..221650TCONS_00022640-exon-sc0000429-1510915933:221605..221650Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:220849..221090TCONS_00022640-exon-sc0000429-1510915933:220849..221090Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:220339..220501TCONS_00022640-exon-sc0000429-1510915933:220339..220501Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:219595..219691TCONS_00022640-exon-sc0000429-1510915933:219595..219691Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:219298..219373TCONS_00022640-exon-sc0000429-1510915933:219298..219373Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:219016..219141TCONS_00022640-exon-sc0000429-1510915933:219016..219141Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:218118..218285TCONS_00022640-exon-sc0000429-1510915933:218118..218285Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:217572..217629TCONS_00022640-exon-sc0000429-1510915933:217572..217629Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1510915933:216063..216962TCONS_00022640-exon-sc0000429-1510915933:216063..216962Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:226847..227117TCONS_00022640-exon-sc0000429-1491911889:226847..227117Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:224589..224874TCONS_00022640-exon-sc0000429-1491911889:224589..224874Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:222064..222137TCONS_00022640-exon-sc0000429-1491911889:222064..222137Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:221605..221650TCONS_00022640-exon-sc0000429-1491911889:221605..221650Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:220849..221090TCONS_00022640-exon-sc0000429-1491911889:220849..221090Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:220339..220501TCONS_00022640-exon-sc0000429-1491911889:220339..220501Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:219595..219691TCONS_00022640-exon-sc0000429-1491911889:219595..219691Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:219298..219373TCONS_00022640-exon-sc0000429-1491911889:219298..219373Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:219016..219141TCONS_00022640-exon-sc0000429-1491911889:219016..219141Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:218118..218285TCONS_00022640-exon-sc0000429-1491911889:218118..218285Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:217572..217629TCONS_00022640-exon-sc0000429-1491911889:217572..217629Clytia hemisphaericaexon
TCONS_00022640-exon-sc0000429-1491911889:216063..216962TCONS_00022640-exon-sc0000429-1491911889:216063..216962Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000429supercontigsc0000429:216063..227117 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.1177	25.355	91.7879	92.5541	0.850774	1.98316	9.23052	9.49651	16.4526	20.3545	8.4843	15.2023	6.6285	11.4864	12.649	11.8037	12.8191	11.5472	25.96	14.4202	15.0904	17.4786	25.0116	34.91	1.16104	1.60572	83.7108	176.518	2.55652	4.95965
Blast
[Close]
BLAST of TCONS_00022640 vs. Swiss-Prot (Human)
Match: SRR (Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.783e-26
Identity = 99/305 (32.46%), Postives = 153/305 (50.16%), Query Frame = 3 
Query:  549 PCTKSHRLSEMLGMEVFLKRDYMQITGSFKERGARNTLMML---SKEQKARGVIXXXXXXXXXXXXYHGKELGIPVTVCMPVNAPITKVSRCEKLKARVYKYGADII--QAKDYALEIAAK------EGLAYINGYDHPDILAGAGACALECIDQVENIDAVVIPIGGGGLIAGCSVAFKSLNPNIEVIGVESVRCAS-YKAALEAGKPVKIEVDQSMTLADGLCVPKIGSNAFETARSNVDKCVTVDEAYIGLAVLRLVEEEKCVVEXXX--XXXXXXXXXXXXXXXXXXRVVFTLCGGNIDST 1421
            P   S  L+++ G  +F K +  Q TGSFK RGA N +  L   + E+K + V+  S+GNH  A+ Y  K  GIP  + +P  AP      C+KL   +  YGA I+  +  D + E  AK      EG+  ++    P ++AG G  ALE ++QV  +DA+V+P+GGGG++AG ++  K+L P+++V   E       Y++ L+ GK +   +    T+ADG+    IG N +   R  VD   TV E  I  A   + E  K ++E           +   +    + K +   L GGN+D T
Sbjct:   27 PVLTSSILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAP-----DCKKLA--IQAYGASIVYCEPSDESRENVAKRVTEETEGI-MVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLK-GK-LMPNLYPPETIADGV-KSSIGLNTWPIIRDLVDDIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSGGNVDLT 320
The following BLAST results are available for this feature:
BLAST of TCONS_00022640 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SRR4.783e-2632.46Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1[more]
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