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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022605 ID=TCONS_00022605|Name=TCONS_00022605|organism=Clytia hemisphaerica|type=transcript|length=1165bp
GTTTTAACTTCAGATACAGACTGAGAGATTGTATTGATCTTTTGAATCTT
TTGTTTATCGTTTCTTGTTATGGTAgctttttcaaacaatttcttATAAA
CTTCACAGCCTCTGTAAAAAGCAGAGTGACCTCTTCCACAATTTACACAA
GATTTAGTCGAGCATTTCTTAGAACAGTTCTCTTTTCCACACCAACTACA
TAGCTGAGCATTAGATTTGCAAGCTGAGAAGATATGACCGaatttaaagc
attttttacATTGAGTTATATAATTATCTACTGGATCGTAGATTCTGACG
TGGTGTTTACGAATAAGATTATTTATTTTAGTAGtgaaagaaaattcttc
agaaaTGTCACCTTTTACAACTTCAAAAATAACAAGATTACCCTCTTTCC
TTAAGTTAAAAACCCTGGGAATACCATGATGTTCTAAGTTTTCATAAACT
TTTTCCAAAGAGATAGGTGGAATGTCAGAGTCTTTGGCAGTTTTATTCAC
ACAAAAGCTATCTAAAAGTCTTGAACGTTTGTCGATTTGCAACCTATTAA
TTTTTTCAGACCAATTATCTCTATCCATGATTTTATCTATGTCTACAATA
TCTATTTCACAAATTAGAACAGATGATTTGGTATGTGCTTCTTTAAcaga
aagaattttaaaattatttaaatgaGAGTTTATATTCTCAATATTATAAG
GTTTATTAAAAGAGTGTTCATGCAaaataattttaagttttttctttttt
atagaaGAGTCAAATGTGGGACCAACAACATTAACAACTGGGTTTGACCA
AGGGTTGGAAGAAGAAGAGCTACGAGATTCAAAACCAGACAACAATTCAA
CACCATCCTCATTATGGATTGGTTCAGATTCAGACTGGATATTGTTCTTT
TTTGGAGAGGAAGTAGATGGTTGGTCAAGAAAATgaactttcaacttttt
tcttttggtaAAATCTTCCTTAAGGACATCAATGCTTCTAGCAGTATCTT
CTAAAGGAGAAGTAGGAACTCTTTTTTTGCTAGTTGACATGGCAACGATG
ATAGAAAAAGGTTCTTAATAAcataaaatttaattaaaaagtaCTTTCCC
AGACGACACAAATAGGGAAGTGACACACTTCAGtagaaaattaattaaaa
agtaCTTTCCCGAAA Run BLAST on NCBI protein sequence of TCONS_00022605-protein >TCONS_00022605-protein ID=TCONS_00022605-protein|Name=TCONS_00022605-protein|organism=Clytia hemisphaerica|type=polypeptide|length=346bp
MSTSKKRVPTSPLEDTARSIDVLKEDFTKRKKLKVHFLDQPSTSSPKKNN
IQSESEPIHNEDGVELLSGFESRSSSSSNPWSNPVVNVVGPTFDSSIKKK
KLKIILHEHSFNKPYNIENINSHLNNFKILSVKEAHTKSSVLICEIDIVD
IDKIMDRDNWSEKINRLQIDKRSRLLDSFCVNKTAKDSDIPPISLEKVYE
NLEHHGIPRVFNLRKEGNLVIFEVVKGDISEEFSFTTKINNLIRKHHVRI
YDPVDNYITQCKKCFKFGHIFSACKSNAQLCSWCGKENCSKKCSTKSCVN
CGRGHSAFYRGCEVYKKLFEKATITRNDKQKIQKINTISQSVSEVK Run BLAST on NCBI transcript from alignment at sc0000428:102938..104102 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022605 ID=TCONS_00022605|Name=TCONS_00022605|organism=Clytia hemisphaerica|type=transcript|length=1165bp|location=Sequence derived from alignment at sc0000428:102938..104102 (Clytia hemisphaerica)
TTTCGGGAAAGtactttttaattaattttctaCTGAAGTGTGTCACTTCC
CTATTTGTGTCGTCTGGGAAAGtactttttaattaaattttatgTTATTA
AGAACCTTTTTCTATCATCGTTGCCATGTCAACTAGCAAAAAAAGAGTTC
CTACTTCTCCTTTAGAAGATACTGCTAGAAGCATTGATGTCCTTAAGGAA
GATTTtaccaaaagaaaaaagttgaaagttcATTTTCTTGACCAACCATC
TACTTCCTCTCCAAAAAAGAACAATATCCAGTCTGAATCTGAACCAATCC
ATAATGAGGATGGTGTTGAATTGTTGTCTGGTTTTGAATCTCGTAGCTCT
TCTTCTTCCAACCCTTGGTCAAACCCAGTTGTTAATGTTGTTGGTCCCAC
ATTTGACTCttctataaaaaagaaaaaacttaaaattatttTGCATGAAC
ACTCTTTTAATAAACCTTATAATATTGAGAATATAAACTCtcatttaaat
aattttaaaattctttctgTTAAAGAAGCACATACCAAATCATCTGTTCT
AATTTGTGAAATAGATATTGTAGACATAGATAAAATCATGGATAGAGATA
ATTGGTCTGAAAAAATTAATAGGTTGCAAATCGACAAACGTTCAAGACTT
TTAGATAGCTTTTGTGTGAATAAAACTGCCAAAGACTCTGACATTCCACC
TATCTCTTTGGAAAAAGTTTATGAAAACTTAGAACATCATGGTATTCCCA
GGGTTTTTAACTTAAGGAAAGAGGGTAATCTTGTTATTTTTGAAGTTGTA
AAAGGTGACAtttctgaagaattttctttcaCTACTAAAATAAATAATCT
TATTCGTAAACACCACGTCAGAATCTACGATCCAGTAGATAATTATATAA
CTCAATgtaaaaaatgctttaaattCGGTCATATCTTCTCAGCTTGCAAA
TCTAATGCTCAGCTATGTAGTTGGTGTGGAAAAGAGAACTGTTCTAAGAA
ATGCTCGACTAAATCTTGTGTAAATTGTGGAAGAGGTCACTCTGCTTTTT
ACAGAGGCTGTGAAGTTTATaagaaattgtttgaaaaagcTACCATAACA
AGAAACGATAAACAAAAGATTCAAAAGATCAATACAATCTCTCAGTCTGT
ATCTGAAGTTAAAAC Coding sequence (CDS) from alignment at sc0000428:102938..104102 >TCONS_00022605 ID=TCONS_00022605|Name=TCONS_00022605|organism=Clytia hemisphaerica|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000428:102938..104102 (Clytia hemisphaerica)
ATGTCAACTAGCAAAAAAAGAGTTCCTACTTCTCCTTTAGAAGATACTGC
TAGAAGCATTGATGTCCTTAAGGAAGATTTtaccaaaagaaaaaagttga
aagttcATTTTCTTGACCAACCATCTACTTCCTCTCCAAAAAAGAACAAT
ATCCAGTCTGAATCTGAACCAATCCATAATGAGGATGGTGTTGAATTGTT
GTCTGGTTTTGAATCTCGTAGCTCTTCTTCTTCCAACCCTTGGTCAAACC
CAGTTGTTAATGTTGTTGGTCCCACATTTGACTCttctataaaaaagaaa
aaacttaaaattatttTGCATGAACACTCTTTTAATAAACCTTATAATAT
TGAGAATATAAACTCtcatttaaataattttaaaattctttctgTTAAAG
AAGCACATACCAAATCATCTGTTCTAATTTGTGAAATAGATATTGTAGAC
ATAGATAAAATCATGGATAGAGATAATTGGTCTGAAAAAATTAATAGGTT
GCAAATCGACAAACGTTCAAGACTTTTAGATAGCTTTTGTGTGAATAAAA
CTGCCAAAGACTCTGACATTCCACCTATCTCTTTGGAAAAAGTTTATGAA
AACTTAGAACATCATGGTATTCCCAGGGTTTTTAACTTAAGGAAAGAGGG
TAATCTTGTTATTTTTGAAGTTGTAAAAGGTGACAtttctgaagaatttt
ctttcaCTACTAAAATAAATAATCTTATTCGTAAACACCACGTCAGAATC
TACGATCCAGTAGATAATTATATAACTCAATgtaaaaaatgctttaaatt
CGGTCATATCTTCTCAGCTTGCAAATCTAATGCTCAGCTATGTAGTTGGT
GTGGAAAAGAGAACTGTTCTAAGAAATGCTCGACTAAATCTTGTGTAAAT
TGTGGAAGAGGTCACTCTGCTTTTTACAGAGGCTGTGAAGTTTATaagaa
attgtttgaaaaagcTACCATAACAAGAAACGATAAACAAAAGATTCAAA
AGATCAATACAATCTCTCAGTCTGTATCTGAAGTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022605-exon-sc0000428-1491911889:102938..104102 | TCONS_00022605-exon-sc0000428-1491911889:102938..104102 | Clytia hemisphaerica | exon |
| TCONS_00022605-exon-sc0000428-1510915933:102938..104102 | TCONS_00022605-exon-sc0000428-1510915933:102938..104102 | Clytia hemisphaerica | exon |
| TCONS_00022605-exon-sc0000428-1575043694:102938..104102 | TCONS_00022605-exon-sc0000428-1575043694:102938..104102 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000428 | supercontig | sc0000428:102938..104102 . |
Blast
The following BLAST results are available for this feature:
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