|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022546 ID=TCONS_00022546|Name=TCONS_00022546|organism=Clytia hemisphaerica|type=transcript|length=1169bp
CGAAGACTTTGGCTGTGTTCGTAACACTTGGTACATATGTTCaagctaaa
atgaaaaaattaacaaagtcTTACAAAAATATCTAATTTGATATAATGAA
TTGAGTTTAAAATTATAATTTAAGTGTCTATGTAAACagtttaaagttga
aaaatgtagGTTGAAAAGTCCTAAGAAGTGCATGAATGACTAAGCAAAAT
GGCGAAACCTAAGCAAGATGGCAGATAAGAAAAGCAAACACTGAAATGCC
AAATCAAATTTACCAGTTAGCCTGGGTATGAAAACTGTTTGATGAATTGA
CTAAGTCTTGAATTGAATGACTAAGTCATGTCGAAAattgatatttgaaa
aattgatgttcGACCTTCAAGTGCTCCTTTTGGAATGAATGCAGAACTGA
GAATGACACTGCTCTTTATCAACTTGtgtataaaatacagaccaaaaatt
ttcaaatgaaaaatacaggataaagcaaagctgacatatactatttgaaa
tttattgaataaatCGACATGAATTaatataaattaactgaaaatgttca
acaacactgaaaatcctaaaaatgcaaaaacaaagAATAAAACAATGAGc
agaatgaaaaaataaccaaaaaagacaaaacatagaaaaaactgaaaagg
ccagaaagaAAAGAACCTGAAAACTACAGCTGATGCTGTGAAATAAGAAC
TTCAACATGGTATGGGCAGAAAACGTTGTGATATCAGGTTGAATCGAggt
aaatatcaaattttagaGCTGGGAAAGAGAAGCATAAGTAGAGACTTTTA
CTTCACTTCAGAGCATGTAATCAAAACACATACATCAATTGTTCTGCTGA
AGCTTAATTCTTCGGAAATCTTCAATATTCACATTACTCTGAGGACTCAA
TTAttgaaatactaaataaaagcacataaaaagtcaaagaaatatATCTA
AGACCTAGAAATCGAATTAGATAATGACAGTAAacacaaaaaattataaa
gaaaaaaaagcagTAAGCACGTGCTGGTATTTAAACATTGAGAAAGATAT
AATTAACAGTAATACCTCGTCGGAAAAACCATTTTTATCGGATTGAtcta
tttcaagaattttccaaaaaaatggaaatgaaGGAAGGTTATTTTAAATT
ATACTTAGTCTAATATGCC Run BLAST on NCBI transcript from alignment at sc0000424:233081..234249 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022546 ID=TCONS_00022546|Name=TCONS_00022546|organism=Clytia hemisphaerica|type=transcript|length=1169bp|location=Sequence derived from alignment at sc0000424:233081..234249 (Clytia hemisphaerica)
GGCATATTAGACTAAGTATAATTTAAAATAACCTTCCttcatttccattt
ttttggaaaattcttgaaatagaTCAATCCGATAAAAATGGTTTTTCCGA
CGAGGTATTACTGTTAATTATATCTTTCTCAATGTTTAAATACCAGCACG
TGCTTActgcttttttttctttataattttttgtgtTTACTGTCATTATC
TAATTCGATTTCTAGGTCTTAGATatatttctttgactttttatgtgctt
ttatttagtatttcaaTAATTGAGTCCTCAGAGTAATGTGAATATTGAAG
ATTTCCGAAGAATTAAGCTTCAGCAGAACAATTGATGTATGTGTTTTGAT
TACATGCTCTGAAGTGAAGTAAAAGTCTCTACTTATGCTTCTCTTTCCCA
GCtctaaaatttgatatttaccTCGATTCAACCTGATATCACAACGTTTT
CTGCCCATACCATGTTGAAGTTCTTATTTCACAGCATCAGCTGTAGTTTT
CAGGTTCTTTtctttctggccttttcagttttttctatgttttgtctttt
ttggttattttttcattctgCTCATTGTTTTATTctttgtttttgcattt
ttaggattttcagtgttgttgaacattttcagttaatttatattAATTCA
TGTCGatttattcaataaatttcaaatagtatatgtcagctttgctttat
cctgtatttttcatttgaaaatttttggtctgtattttatacaCAAGTTG
ATAAAGAGCAGTGTCATTCTCAGTTCTGCATTCATTCCAAAAGGAGCACT
TGAAGGTCgaacatcaatttttcaaatatcaatTTTCGACATGACTTAGT
CATTCAATTCAAGACTTAGTCAATTCATCAAACAGTTTTCATACCCAGGC
TAACTGGTAAATTTGATTTGGCATTTCAGTGTTTGCTTTTCTTATCTGCC
ATCTTGCTTAGGTTTCGCCATTTTGCTTAGTCATTCATGCACTTCTTAGG
ACTTTTCAACctacatttttcaactttaaactGTTTACATAGACACTTAA
ATTATAATTTTAAACTCAATTCATTATATCAAATTAGATATTTTTGTAAg
actttgttaattttttcattttagcttGAACATATGTACCAAGTGTTACG
AACACAGCCAAAGTCTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022546-exon-sc0000424-1491911889:233081..234249 | TCONS_00022546-exon-sc0000424-1491911889:233081..234249 | Clytia hemisphaerica | exon |
| TCONS_00022546-exon-sc0000424-1510915933:233081..234249 | TCONS_00022546-exon-sc0000424-1510915933:233081..234249 | Clytia hemisphaerica | exon |
| TCONS_00022546-exon-sc0000424-1575043694:233081..234249 | TCONS_00022546-exon-sc0000424-1575043694:233081..234249 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000424 | supercontig | sc0000424:233081..234249 . |
Blast
The following BLAST results are available for this feature:
|
