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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022449 ID=TCONS_00022449|Name=TCONS_00022449|organism=Clytia hemisphaerica|type=transcript|length=801bp
taaatttaaataCCAAATACTAAACGTACATGgtattttttaatgaaact
tATGGAAGCCTTCAAATAAGTTTTAGATTCTAAGCCATAACTaaaacatt
ttctcaattcAATGTTGCATAAGGTATCAAGTTATTaaaattgtctttgt
tTTTTTTTTTGCCTCTtcgaagtttgtttttatatctAAAGAgacaaaac
attttcttgagtttGTTATGATTCATTTCCGCCGTCTGCAATTACGATCC
GCCTTTGGGTTAGCCAACAATTATTGACTGACGTCTGGTATGGATCTTTT
TCCATATGTAATTTTGCTTCGCCGCTGCGGTTATTTAACTCCCATTCGGC
TTTGGGGGAGAGATTTAATTACATTTAGATTATTTAGTCAACTCGTCACT
AATGTTTGATATCTCCCGATACACTTGGAATACTATTTCCTACGTGGTAA
TAAGCTCGTCCTTTTGGGAACCAAGTTTGAGAAAACATTGAAGGGATTTC
TTCTGGGATGAAAAATGTTTTGGGCCACCACCAGATATTCTTCATATGAA
TTTTTAAAGATGAATCTGGAACGCTTGTGGTCATTGGTACTGTGTTAACA
TTGAGGTAAAGATCAGCGAAGGTTTGATTGGCGTGGAAGGTTGAGTGGTA
TAATACATCTTGGTTAAAGAAACATGTCACGTTCCCTCTATCAAGACGGA
AATCAAGGGAACAAGCCAACAACGACCATTCACTCTCCTTCAAACCTCCT
GCCtaaaagaaaaatgtattttctttattaaatttcttctttggacctac
c Run BLAST on NCBI transcript from alignment at sc0000421:53001..53853+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022449 ID=TCONS_00022449|Name=TCONS_00022449|organism=Clytia hemisphaerica|type=transcript|length=853bp|location=Sequence derived from alignment at sc0000421:53001..53853+ (Clytia hemisphaerica)
taaatttaaataCCAAATACTAAACGTACATGgtattttttaatgaaact
tATGGAAGCCTTCAAATAAGTTTTAGATTCTAAGCCATAACTaaaacatt
ttctcaattcAATGTTGCATAAGGTATCAAGTTATTaaaattgtctttgt
tTTTTTTTTTGCCTCTtcgaagtttgtttttatatctAAAGAgacaaaac
attttcttgagtttGTTATGATTCATTTCCGCCGTCTGCAATTACGATCC
GCCTTTGGGTTAGCCAACAATTATTGACTGACGTCTGGTATGGATCTTTT
TCCATATGTAATTTTGCTTCGCCGCTGCGGTTATTTAACTCCCATTCGGC
TTTGGGGGAGAGATTTAATTACATTTAGATTATTTAGTCAACTCGTCACT
AATGTTTGATATCTCCCGATACACTTGGAATACTATTTCCTACGTGGTAA
TAAGCTCGTCCTTTTGGGAACCAAGTTTGAGAAAACATTGAAGGGATTTC
TTCTGGGATGAAAAATGTTTTGGGCCACCACCAGATATTCTTCATATGAA
TTTTTAAAGATGAATCTGGAACGCTTGTGGTCATTGGTACTGTGTTAACA
TTGAGGTAAAGATCAGCGAAGGTTTGATTGGCGTGGAAGGTTGAGTGGTA
TAATACNGTAAAGATCAGCGAAGGTTTGATTGGCGTGGAAGGTTGAGTGG
TATAATACATCTTGGTTAAAGAAACATGTCACGTTCCCTCTATCAAGACG
GAAATCAAGGGAACAAGCCAACAACGACCATTCACTCTCCTTCAAACCTC
CTGCCtaaaagaaaaatgtattttctttattaaatttcttctttggacct
acc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022449-exon-sc0000421-1491911889:53001..53639 | TCONS_00022449-exon-sc0000421-1491911889:53001..53639 | Clytia hemisphaerica | exon |
| TCONS_00022449-exon-sc0000421-1510915933:53001..53639 | TCONS_00022449-exon-sc0000421-1510915933:53001..53639 | Clytia hemisphaerica | exon |
| TCONS_00022449-exon-sc0000421-1575043694:53001..53639 | TCONS_00022449-exon-sc0000421-1575043694:53001..53639 | Clytia hemisphaerica | exon |
| TCONS_00022449-exon-sc0000421-1491911889:53692..53853 | TCONS_00022449-exon-sc0000421-1491911889:53692..53853 | Clytia hemisphaerica | exon |
| TCONS_00022449-exon-sc0000421-1510915933:53692..53853 | TCONS_00022449-exon-sc0000421-1510915933:53692..53853 | Clytia hemisphaerica | exon |
| TCONS_00022449-exon-sc0000421-1575043694:53692..53853 | TCONS_00022449-exon-sc0000421-1575043694:53692..53853 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000421 | supercontig | sc0000421:53001..53853 + |
Blast
The following BLAST results are available for this feature:
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