TCONS_00022389 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022389
Unique NameTCONS_00022389
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022389 ID=TCONS_00022389|Name=TCONS_00022389|organism=Clytia hemisphaerica|type=transcript|length=3643bp
AGGGCGGCCGCCAAACCGCCATGTTATTAGATGGCGGAAAATACGataaa
atcgggaaatcgggtcTCAATCTagtcaaaactcaaaaagaaaaTGGCTG
CCAACGCTAGGCAAAATTCCTCTGAATGGATGATCCATCCAAGCTTCGTT
TTCAAGTCTTTCGAGGAAACTATTGCGAAACAGAATTTCTCACAATTTTC
AGCAACACCGCATATCGTTCCTGAAAAGATTCTTGAGTCATTTGTTGATG
AAAGTGGTTTGCGGTGTTATCGTGTTAAATGGCTGGATAGTTGGCTATCA
GAGCAACACATCTCGGCTTCCTTCCCTCATTTGATCACTGAATATTGGAT
CAACAAACCTATAAACGATGGAGAGTACCAATCATTCCCAGGCCCTTCCA
ACAGAAGCACCAATGTATCGAATAATGACTCTACAACAGAAACAAacgaa
caacaacaacaagtttTGTCGCAAAATATTCAAACCGTGACCAACAACAA
TGCGGCTGAAATGAATGCCACCTCTTTGAACACCaatgaaaaacaaactt
tagcAAACATTGAGAACACCACTGATAAACCATTAGAAAATTCAGGCGTG
ACTTTGAATATCACAAATTTGACGGGTGTTTCGCAAGATATTTCTCATAA
TAATATATTCAATGAAGAGAATAAAACAGTGGACCAGCAGCCTCCTCATT
CTCTCCCCACAAAACAAGAACAAACCCaaacacaaaaagacaatacagaG
CACCAGCAAAATGAGGATcaacatttactttcaaaagaAGGCGCCGATTT
CATGGTTGAGAGTCTTCATTTACCAGATCGTGTTGGTAATTCTCACAAAG
GACAGCAAGATAAAGCCCTGGTTACACTTCTTCCAAAACCAAACAATGAA
TCTGTCTTTGTTATCGGTaaaaacttcaataattttACGGAAGATAGCAA
GGGTAAATTAAAACAAAGTAATtctggttttcagaaacttccTCCAGCGT
CTGTTTTTAACCAACTTCAacatttcaacaaccaacaaaaTCAAGCGCCC
AACCCGCCCCAGCCCAATCAACAACAGCCTCAACAAATTCAACCACAATC
ACAACAAACTttacagcaacaacaacaaggtATTTTATCCGTCATGCAAC
AATTATCCAATCAAACTCAACAAATTCACCAACAAAATATTTCCATTGAA
ATTGCTCGCAACCTTGGTGAAAAACGTCCCCATATGGAGATGCAAGGCGC
TAATGGTGAAAAGAAGACAAACACTCGGAAGCTAGCCAAAAAAGAACCGA
AGGAGAAACAACCAGTAGAGTGTGACATTTGTGGAAAAATGATCTCCTCC
CGTAAAAACCTTCGTGTTCATAAAACAGTTCGTCATTTCAAAAACGGTAG
TTTCGCTTGTGAGATTTGTGGGCGGAAATTTGCGTTGAATAGAGATTTAC
AGAGACACATGCCTTTGCATACGAACGAGAGGAAGTATACTTGTAAATAT
TGTGGTTTACAGTGTAAGCAACCTGGACATTTGACCAAACATATGCGAAC
ACACACTGAGGTGATGAACTGGAGGTGTGATTGTTGCTTCAAGAACTTTA
AAGTACAAGCAGATCTCAAAGAGCACTGTTTCAATGAACATAGTGACATC
AAAGATAAGAACTTGACTTGTTCTGTGTGTAAGGAGAAATTGAAACTACC
TAATTCCGTCTATCTTCACAGCTTGAGACATTCAGGTGTCCGCGAACATG
AGTGTCCTATATGCAAAGCTACCTTCAAACTAAAGCAGCATTTACAAGTT
CACGTCAAGACACACGATAAGCCGAAAGAGACGGAGAAAGCCAAGTGTCA
TATCTGCGAACGCGTATTCAAGTCACGCACTATCTGTGACCGTCACATTG
CCAAACACACTGAAACAACAGCTGAAGAATTTCAAGCCAACAAGAAATTA
TTGAAACAGGAGAGAAAATTACGGAAGAAAGAATTAGCTAGACAAATGAT
AATGGATCAAAGGCTAGTTGATCAAGGATTGCTCGATCAAAAGATGGTAG
AACACAGTCTAGTGACGGACGATTCAGATTCAGACGATCCGGACAAAATG
TCCGGTAAACGAAAACAGCGAAAACCAAATAAAGTGATACGCCGGTTCAG
CCAAGACTTACAAACAAAACTAGTTGCAAATCAACAAAGTGGTGAGCAAC
ATAGCTGCACTTATTGTAACGAGACATTTGAATCCATCGCACTTTTGAAC
TCTCATATTGAACAGCATATCCACCAACAAGAACCCAAAGAAATCGATAA
ATCCAGTGAACTCGCTTTGTTTACATTAAACCAATCTAGTGAACAGGACG
TTAGTGGTAAGAAAATGGTGAGCGTCTTGATGGGCCATATGAACGAGGTT
ACGTCACCGAAAGGTTTGACACTCCCTTCAGCTGTTGATCAGGATGATGC
TTCAAAAGAAACTGAAGAGTCGGCTATTGTGGAGATCGTTTTTATGAAGA
ATACTTCGGATACTCCATAAGATAGATTTTTCCAACCTTCCTTCTTCAAT
GAATGGATGGGCATTATTAAGAAAGGGAAATgtggctcttccagaaaaaa
tcttgGGGTTCAAGATATCTATCAGGAGTAAATTTCGGTGCCAAGGTGTG
AAAAAATCGAATTGTCCAGGGAAGAtcagggaaaaatattttctcaaacT
CCCCCCCCCCGCCGGATTTTCTTTATGAAGAGCCCATCAATCAAAGAACG
GCCTGAACCCAGAAAGAGCGCTCTCAATCATTATTACTTGaagtttccaa
atattttttatctCAAATTTATGCCCCATTTCGCAGGGAATTGATTTATA
AGAggaatactttaggcgtacaaactttcgcgtgcagaaactttcgcgag
gacgaaaaatcgcgaaattcacgacatttactttcgcgaatttaacggaa
aaatatttttcgcgagcataaactttcgcgaatgaagACGtcaaattgag
aattttcacataaaataatggcttagagggacaaatacttcttggatcgG
CTTGAaatatttgtcctttgacttattagtcttttagcaggctaaaaagt
gccataaaagttacattttatacaaagtttgaagttttacagattttcta
ttttgtcaagaacttttcgcgagcataaactttcgcgaatggccctccct
agaatttttaaagacatttactttcgcgaaaagggccaaaattcgcgaaa
atcgcgaaagtttctgctcgcgaaagtttgtaagtacgcctaaagtagtg
gGAATTTAAGACATGAAGAACTTTGAAATGATTGTTTGTTTGGATAAAAC
TCCTAAAATAAatcattattttgaataaatatttatttCTACTTTTTTAC
AGCCTATAAACTGCATAAAGttgtacaatttttttatataattagCTATT
TATTGAAAATCCATTATTTAGTCGgaaaaagttgataaattaCGTCGAAT
TTGAGAACAACTCGAAACCTTCGAACCTTTAttctttattgaaaattatt
attatctctaattttttcccaaaagtactttttcaaaagttttaactTCA
ACATACGGCAATGGCAACTCGTGGCCCCGAGTATGTAGATCAG
Run BLAST on NCBI

transcript from alignment at sc0000414:22188..31979-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022389 ID=TCONS_00022389|Name=TCONS_00022389|organism=Clytia hemisphaerica|type=transcript|length=9792bp|location=Sequence derived from alignment at sc0000414:22188..31979- (Clytia hemisphaerica)
AGGGCGGCCGCCAAACCGCCATGTTATTAGATGGCGGAAAATACGATAAA
ATCGGGAAATCGGGTCTCAATCTAGTCAAAACTCAAAAAGAAAATGGCTG
CCAACGCTAGGCAAAATTCCTCTGAATGGATGATCCATCCAAGCTTCGTT
TTCAAGTCTTTCGAGGAAACTATTGCGAAACAGAATTTCTCACAATTTTC
AGCAACACCGCATATCGTTCCTGAAAAGATTCTTGAGTCATTTGTTGATG
AAGTAAGTCTTTTTTGCTTTTAAAATTTTCTAGTATAAATCAATTTTTAT
ATNCTTGTATTTACACAAGTTGTACGGAAGTGTGTTTATCAAAAAAGTTT
TTTGCAATTCATTGTTTCTCCACTATTACTTTTCTTCTATTTTCATTTGG
ATTAGGTTTTTCTTTCACATACCACTATTTAAATTCCCTTTAACTTTTTG
CTAAATTACCCTCTGTTTCGGAATGATTAAAAAATCAAAAATACCAAAAA
AATCGTAAATATACACAATTAACAAAAATATTCTTAACTTTTTTTCGTTT
TTATCAGTTTGAGTTATTTATCTATCAATACTTTTCTTTTTCTAAAATGA
CAGATATTACAGGGTATAGACAAAACGCTGAACGGCGGAACGACGGAATG
CCGGAACCGGAATAGCTGTTCCGGCCGGAATAGCTATTCCGCGGAATAAT
GATTTTTTTTTATATTTTGTATTCCGCGGAATATGATTATATATTTTTTT
CCATCTGGGCCGCCAAGTCAAGCGGAAGTCAAGCTAACGAAGGTATGACA
TCGCTGAAAACATTCTATAAAGCACGGCTAGAAGTTGGTCCAGTGGTTTA
AAGCGTTGGTTTCACGCATTAGGGGTCCCCAGATTGAAGCGGGTCAAAGT
CACCTTTAAAATTTTTATCCAGGTTTTGATGTTTCATGTTTTTTTGGGTG
CAGATTCCGAAAAAATAGGTCTGAAGTCCTGAAAAGTTGACGGAAGGGCG
CCATGAGACCGTAAAGGACCCGTACGGGACCGTGAATGACCCCCTCCCCT
AGCGCCGGACTGGGTAGGTCTCACGACTTAAAACTTTCTGGAGACGTCAA
GCATATCGAAGGGGGGAGCATACCAAATTTCATCACTCCACTGTTACCGG
TCGCCGGGCTACGGGCCACGCAAGGTACGCTGCAGGACGTCCCCGTACGG
ACGATTGCCGGGTCGTACGGCGTTTTTAGCCGGTCAAATTTTCCGTGAGG
TATAATTAATCTAGTTCTATCTTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGTAGC
CGATTGCTGATTATAGGTGATTATGGGTGATTATGGGTGGTAATGGGTGA
TTATGGATGATTATGTACATAGATATACCCTCAGGGGTGATAAAAGAGAA
TTATAATAAAAAATCATATTCCGCGGAAAATAGCTATTACAAAAAATAAA
AAAAAAATAAAAAAATGATATTCCGCGGAATAGCTATTCCGGCCGGAACG
GAACAGCTATTCCGGTTCCGGCATTCCGGCATTCCGCCGTTCTGCGTTTT
GTCTCCACCCGATATTACATATCTTCACTATATATAAGTAGTCGAAGGAC
GAAGCTGGCACTCTCTAACTGTCTTTAATAGTTCTGGTGGGGGAAAAAGA
AAACTACCGAGAGGTTCCCTCTGACGCCATCATTCAAATCACAAAGTGGA
GAGTATCCACAGAGATTTTCTGACTTGCTTGTTAAAAGGGGTCATAAACA
TAATAGGAGGACCCTTCTGGTGCTCCGGAAACTTTCTTCTGGCAGTCTGG
AGCAGCTAAAAAAAGACAATTTTTCTCTCCGGAAAGCTTTGGAGCTCTCC
AGTGCTCCCAGAGTAAGTGATTTTTATCATGTTCTAAAAAACCGTTTGAA
CATAGTTACAAAAAATATTTGTCCCCAGAGGTGATGGACACTTTGTTGGT
CAAATAAAATACTTATACAGTCTTTGAGGATGATGTTTCAGCCATTAATG
AAATGAATTTCTCACATTAGCTATATTTGAAAGCATCACTGGTCGAAATA
TCGAAACTACCATGAGTTGGCTGATTATTTTAAAATATGAGTGTAGCGGA
AGTGCACTGGAACGTTCTGGAGCTCTGGTGCAGACCAATCGCCGAAAATT
GTGCTCCAGAATCTTCCGGTGTTCCGTAGCACGAAAAAAATGGAATTTTT
TTCTCTGGACGTTTCCGGAGCGTCAAGAGTGTCCTGTCATAGCCAGACCT
GCCAACTTGAAATGTTCATTTTGTGTGAGATAACAATTTTGAAGCAAAAT
CCGAAATCTTAGCCCAAATTTTCCTATTTTCCCATGTCATAAATCAGAAA
AATTTTTCCAAAAGATCAGAAATCTGGGAAAATTTTTTTTCAAAAATGCA
TGAGAAATCAAACTTTTGAAAAATTGCGTGAGGCAGTGTTGGAATGTGTG
AGTCTCACATACAATGCGTGAGAGTTTGCACCTCTGCATAGGTTGCCATA
GACAGGAGACCTGTCCTGTATTTTTGTAATCTGATGTTTACAGGACAGGT
AGATTACTGCCTCAAAAAAATTACAGTGGGAAATTCGAATTTAGCGCTGT
CCTAACTTACTAAAATCAAAACCTAATTTCAGAACTTGCGCTTTCTCTAA
GAAAGTGTGACCAGTAAAAGAATAACACAATTTGATTGGTTATGTTTTCA
ACCGTTATTAGGATCTGGGAAATTCAAACTCTCAGCCTATACCCTGATCA
GTATATAAAATAAGAAATCATAGCATGGATCTCCAGGCTAAGGTTGCCAT
AGGGTGCTTTAAGCTATCACAGGCAAAAAAATTTGAATATGGGAAAGAAT
GTTGCTTTTGTTTTCGAAAACCCACTAAGCTTCTGATTGGTCAAGCGCTG
AAATTCTATTATAATATCACATGACTTAGGCAGCTAGGAGGATTTCCTAC
CAAACTACGGCACACTTTTCAGCAAAAGTTTGACATCTAGCCCTTTGTTG
GGCATCAAATTTGGGGGATTTAGAATTTGGTTTATGGTGGGCAGATATTT
TTTTTATTTTTCAAATTTTGGGGAACTAAAAAAGGCTGATGGTGCAAGGA
GATTTATGAGGGGGGGTTGATTTTTTGTCTTCTCACATTCAAAACTATAA
CCATGAGATATTTAATCTAGTTCAGGATTTAGAAAAACGTTCACCATTTT
TAAATATTTCAACAAATTGATAGCTTAGTTATGCTTTCAATTCACACATG
TAAAAAGCAAGATTCCTCTGCATAACTACAAGTCAAATTATTATATGCAC
CCGATCAATCGAACTTGTCAAACAAATCAAACTGATTGAACTCCATCGCA
CTCCATCGCACGATCAGAGTTTGATTGAAAAATTTCTGCACATTCTTTGA
GGATCCTTGTTGAAATGCCATCTGGAGCGCTGGCTTTGTTTGGATCTAGA
TCCTTTAAAAGTTTAAGAATGCTGTTAGTGAAGGTAATTTGTCTGATTGC
GGGTCGTTGATTTCAGGTGAAATTCCGTCGTCTACAGAGAAAATGCTTGC
AGATTGTTTGTTAATGTTTCTGCAATGTCAGAATCCTCTGTTTGGAGGCG
ACCATTGTCAAGTAATGGGCTAACTGGGGTGATATTTGTCTTTTTTGATT
TAATGAAAGAGAAGAATAGTTTGCTGTTCTTTTTGTCATTTATTATATAT
TGTCTCTGATGTAGTTGTTGTATGTGTTGTAAGGTGCTGTGGTATAGTGG
TCATTGACCTTGGTTGCTGCACAAATGACTGACGTTCGATTCCCACTCGC
AGTGGTTCCCTTGGGAAGTGAATGAACTTCGCCCGGGTCAACCCATGCCA
TAAGAGGGGAATTGGGTTGTCAGTCCAAGGTGCTGACGGGGCACTCATTG
AAAGTATCTATAGTTGCGAAAATAGGCCTCAAAGCCTCCTGCAACTCAAC
CAAATAGAAATAGAAATAGAAATTGTTACAGGTCTGTCTTGCTGCTTTTT
CTGCTTCTAAGTATTTATGTACTTTTGATGACATCATGACTTTATTGTAG
ACGTTATATAAATTAGATGATATTTGATAGAAGTCTTTCAAAGTCACACT
CGATGGCCACGATGGCTAGAGAATCCTACTTTTATTTTTATTTCTCTTTA
AACAAATTATTTGTGGTTAAAAAAGCACTGCAAGGTCCTCTTTTTAACCT
ACCCCTTTTAAATATATAGTTTCGTCTGCTGTCTTCGCTCAAGCTAATGA
ATTGGTGACAAGTCGAACGGCCTGGGACCGCTAGTGTTATTAGTATTAAT
GACTCCTTTGCACACTATGAATATATTTTGTTCATTTCAATAAATCAAGG
TTTTTTTCTAATGATACTTGCAGCTCCATCGTTACACCTTTGTCTTTTGG
GTCTTTCAAAATTCTGTCGCGGCTTGACAACACAAAAAGGATTTTTTATT
TCGGAAAGAAAAACATTTGGTCACACAGGGTCATAATTTATTCAATTTTT
TTTCAATTTTTTTTCAATTTAGCTCAAGTTCACTTTGAATAAATTCAGAT
AATTGAGTAGGTGTCTCTAGGTACCAGTTACCATTGAGCCAAACCAAACT
CCAAACATAAAAAGACAAGGTTTAGCAAGAAAGTACTAAGTATGGTTAAG
GATCATACATTTTAGTCTAGACTGGAGTGTCATAACCACTAAAAAAAATT
CGCTCTATAAGATCTATCTGGAGAACCTAGAAGAAAGAAACTATAGAAGG
GTAACATCGAAAACATAACAACAAATATAATATTAGGTGCAAAGGAAGCA
ATAATCTAGCTGAAGTATAAATAAAAGTTGGCTGAGAACCCGGTTCGTTG
TACAGCACCCGAGCGATCCCTTCTAAAGGAAGAAAAAACTCAGGTGTCAT
CTATTTTAGGCGTACAACTTTTCGCGAGCAGAAACTTTCACGAGGTCAAA
AAATCGTTTTTTCGCAAATTTGCGACATTTACTTGAAAATCTGACAATAG
AATATTTTTTCCCGACGATAAACTATTAAGATATTACGATGAAATATTAT
ATACGAAAAATGGCCTAGAGGGAAATACTTCTTGAGCGAAAATTTGTACG
CCTAAAGTACATGAGTTTCCAAACATGCCTTTTCGATTTGTGCAATCACT
TCGACTGTTTGAGAAAAATAAATGTAGGGTTGAGTTGGCTTATTTTTCGC
GTGACAGAATAATTCCGTTCCTTCCTTCCTATTAACTATAACCTGAGTAT
GCTTGGATTCCAGAAGACCCTGTATTCATTTTAAAAGATGTTTCAAAGAT
TACATAATATTTTTTGATTTTTATTATAGAGTGGTTTGCGGTGTTATCGT
GTTAAATGGCTGGATAGTTGGCTATCAGAGCAACACATCTCGGCTTCCTT
CCCTCATTTGATCACTGAATATTGGATCAACAAACCTATAAACGATGGAG
AGTACCAATCATTCCCAGGCCCTTCCAACAGAAGCACCAATGTATCGAAT
AATGACTCTACAACAGAAACAAACGAACAACAACAACAAGTTTTGTCGCA
AAATATTCAAACCGTGACCAACAACAATGCGGCTGAAATGAATGCCACCT
CTTTGAACACCAATGAAAAACAAACTTTAGCAAACATTGAGAACACCACT
GATAAACCATTAGAAAATTCAGGCGTGACTTTGAATATCACAAATTTGAC
GGGTGTTTCGCAAGATATTTCTCATAATAATATATTCAATGAAGAGAATA
AAACAGTGGACCAGCAGCCTCCTCATTCTCTCCCCACAAAACAAGAACAA
ACCCAAACACAAAAAGACAATACAGAGCACCAGCAAAATGAGGATCAACA
TTTACTTTCAAAAGAAGGCGCCGATTTCATGGTTGAGAGTCTTCATTTAC
CAGATCGTGTTGGTAATTCTCACAAAGGACAGCAAGATAAAGCCCTGGTT
ACACTTCTTCCAAAACCAAACAATGAATCTGTCTTTGTTATCGGTAAAAA
CTTCAATAATTTTACGGAAGATAGCAAGGGTAAATTAAAACAAAGTAATT
CTGGTTTTCAGAAACTTCCTCCAGCGTCTGTTTTTAACCAACTTCAACAT
TTCAACAACCAACAAAATCAAGCGCCCAACCCGCCCCAGCCCAATCAACA
ACAGCCTCAACAAATTCAACCACAATCACAACAAACTTTACAGCAACAAC
AACAAGGTATTTTATCCGTCATGCAACAATTATCCAATCAAACTCAACAA
ATTCACCAACAAAATATTTCCATTGAAATTGCTCGCAACCTTGGTGAAAA
ACGTCCCCATATGGAGATGCAAGGCGCTAATGGTGAAAAGAAGACAAACA
CTCGGAAGCTAGCCAAAAAAGAACCGAAGGAGAAACAACCAGTAGAGTGT
GACATTTGTGGAAAAATGATCTCCTCCCGTAAAAACCTTCGTGTTCATAA
AACAGTTCGTCATTTCAAAAACGGTAGTTTCGCTTGTGAGATTTGTGGGC
GGAAATTTGCGTTGAATAGAGATTTACAGAGACACATGCCTTTGCATACG
AACGAGAGGAAGTATACTTGTAAATATTGTGGTTTACAGTGTAAGCAACC
TGGACATTTGACCAAACATATGCGAACACACACTGAGGTGATGAACTGGA
GGTGTGATTGTTGCTTCAAGAACTTTAAAGTACAAGCAGATCTCAAAGAG
CACTGTTTCAATGAACATAGTGACATCAAAGATAAGAACTTGACTTGTTC
TGTGTGTAAGGAGAAATTGAAACTACCTAATTCCGTCTATCTTCACAGCT
TGAGACATTCAGGTGTCCGCGAACATGAGTGTCCTATATGCAAAGCTACC
TTCAAACTAAAGCAGCATTTACAAGTAATTTTGTTACATTTTTCAACTTT
ATTTTTTCGAAACGTTTTCCAGTCTGCTTTTCTACTCGAGTCAAAACTTG
CAATTCGTGTATGTATTTATTTCTTATATGTTGAGAGACGCTTATCAGGG
ATATCCTTTAATTGCGTTTGGTCACCTTCATTTGCATTTTTTGGTATATA
CCGTAATCTCCGCCGATCAGCCTTTTCAGCGAAAGAAAAAAAGCTAAGCT
TCTTCTATTTAGGAATTTCGCTGACCGCTTTTAAAAAAACACGTGGCAAG
CAAGGAAGCATTCAAAATCCACAATTTACTCCAATACAAATATCATTTGT
AAGAATTATTTTTTTTGACAGGTTCACGTCAAGACACACGATAAGCCGAA
AGAGACGGAGAAAGCCAAGTGTCATATCTGCGAACGCGTATTCAAGTCAC
GCACTATCTGTGACCGTCACATTGCCAAACATNAGAAAGCCACGTGTCAT
ATCTGCGAACGCGTGTTCAAGTCACGCACTATCTGTGATCGTCACATTGC
CAAACACACTGAAACAACAGCTGAAGAATTTCAAGCCAACAAGAAATTAT
TGAAACAGGAGAGAAAATTACGGAAGAAAGAATTAGCTAGACAAATGATA
ATGGATCAAAGGCTAGTTGATCAAGGATTGCTCGATCAAAAGATGGTAGA
ACACAGTCTAGTGACGGACGATTCAGATTCAGACGATCCGGACAAAATGT
CCGGTAAACGAAAACAGCGAAAACCAAATAAAGTGATACGCCGGTTCAGC
CAAGACTTACAAACAAAACTAGTTGCAAATCAACAAAGTGGTGAGCAACA
TAGCTGCACTTATTGTAACGAGACATTTGAATCCATCGCACTTTTGAACT
CTCATATTGAACAGCATATCCACCAACAAGAACCCAAAGAAATCGATAAA
TCCAGTGAACTCGCTTTGTTTACATTAAACCAATCTAGTGAACAGGACGT
TAGTGGTAAGAAAATGGTGAGCGTCTTGATGGGCCATATGAACGAGGTTA
CGTCACCGAAAGGTTTGACACTCCCTTCAGCTGTTGATCAGGATGATGCT
TCAAAAGAAACTGAAGAGTCGGCTATTGTGGAGATCGTTTTTATGAAGAA
TACTTCGGATACTCCATAAGATAGATTTTTCCAACCTTCCTTCTTCAATG
AATGGATGGGCATTATTAAGAAAGGGAAATGTGGCTCTTCCAGAAAAAAT
CTTGGGGTTCAAGATATCTATCAGGAGTAAATTTCGGTGCCAAGGTGTGA
AAAAATCGAATTGTCCAGGGAAGATCAGGGAAAAATATTTTCTCAAACTC
CCCCCCCCCGCCGGATTTTCTTTATGAAGAGCCCATCAATCAAAGAACGG
CCTGAACCCAGAAAGAGCGCTCTCAATCATTATTACTTGAAGTTTCCAAA
TATTTTTTATCTCAAATTTATGCCCCATTTCGCAGGGAATTGATTTATAA
GAGGAATACTTTAGGCGTACAAACTTTCGCGTGCAGAAACTTTCGCGAGG
ACGAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTAACGGAAA
AATATTTTTCGCGAGCATAAACTTTCGCGAATGAAGACGTCAAATTGAGA
ATTTTCACATAAAATAATGGCTTAGAGGGACAAATACTTCTTGGATCGGC
TTGAAATATTTGTCCTTTGACTTATTAGTCTTTTAGCAGGCTAAAAAGTG
CCATAAAAGTTACATTTTATACAAAGTTTGAAGTTTTACAGATTTTCTAT
TTTGTCAAGAACTTTTCGCGAGCATAAACTTTCGCGAATGGCCCTCCCTA
GAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAAAATTCGCGAAAA
TCGCGAAAGTTTCTGCTCGCGAAAGTTTGTAAGTACGCCTAAAGTAGTGG
GAATTTAAGACATGAAGAACTTTGAAATGATTGTTTGTTTGGATAAAACT
CCTAAAATAAATCATTATTTTGAATAAATATTTATTTCTACTTTTTTACA
GCCTATAAACTGCATAAAGTTGTACAATTTTTTTATATAATTAGCTATTT
ATTGAAAATCCATTATTTAGTCGGAAAAAGTTGATAAATTACGTCGAATT
TGAGAACAACTCGAAACCTTCGAACCTTTATTCTTTATTGAAAATTATTA
TTATCTCTAATTTTTTCCCAAAAGTACTTTTTCAAAAGTTTTAACTTCAA
CATACGGCAATGGCAACTCGTGGCCCCGAGTATGTAGATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012556XLOC_012556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022389-exon-sc0000414-1575043694:31728..31979TCONS_00022389-exon-sc0000414-1575043694:31728..31979Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1575043694:24456..26000TCONS_00022389-exon-sc0000414-1575043694:24456..26000Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1575043694:24000..24108TCONS_00022389-exon-sc0000414-1575043694:24000..24108Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1575043694:22188..23924TCONS_00022389-exon-sc0000414-1575043694:22188..23924Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1510915933:31728..31979TCONS_00022389-exon-sc0000414-1510915933:31728..31979Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1510915933:24456..26000TCONS_00022389-exon-sc0000414-1510915933:24456..26000Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1510915933:24000..24108TCONS_00022389-exon-sc0000414-1510915933:24000..24108Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1510915933:22188..23924TCONS_00022389-exon-sc0000414-1510915933:22188..23924Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1491911889:31728..31979TCONS_00022389-exon-sc0000414-1491911889:31728..31979Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1491911889:24456..26000TCONS_00022389-exon-sc0000414-1491911889:24456..26000Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1491911889:24000..24108TCONS_00022389-exon-sc0000414-1491911889:24000..24108Clytia hemisphaericaexon
TCONS_00022389-exon-sc0000414-1491911889:22188..23924TCONS_00022389-exon-sc0000414-1491911889:22188..23924Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000414supercontigsc0000414:22188..31979 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.52781	2.81573	0.314919	0	12.8783	9.29749	6.89006	5.25546	1.59739	3.65169	3.01869	2.27897	1.37051	1.94979	1.33751	2.07365	3.28804	4.18769	2.10379	2.25589	3.76399	4.0729	8.83688	9.83525	3.32505	3.64092	5.90041	4.54534	11.3289	12.6552
Blast
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BLAST of TCONS_00022389 vs. Swiss-Prot (Human)
Match: ZBT40 (Zinc finger and BTB domain-containing protein 40 OS=Homo sapiens GN=ZBTB40 PE=1 SV=4)

HSP 1 Score: 112.079 bits (279), Expect = 1.050e-24
Identity = 69/230 (30.00%), Postives = 110/230 (47.83%), Query Frame = 1 
Query: 1234 MEMQGANGEKKTNTRKLAKKEPKEKQPVECDICGKMISSRKNLRVHKTVRHFKNGSFACEICGRKFALNRDLQRHMPLHTNERKYTCKYCGLQCKQPGHLTKHM-RTHTEVMNWRCDCCFKNFKVQADLKEHCFNEHSDIKDKNLTCSVCKEKLKLPN--SVYLHSLRHSGVREHECPICKATFKLKQHLQVHV-KTHDKPKETEKAKCHICERVFKSRTICDRHIAKHT 1911
            +E  GA GE        A K+ K++ PV CD+CG+  +    ++ HK   HF    F+CE CG KFA N  L+ H+ LHT +R + CK+C +   Q   L  H  + H+E   + C  C   F    +L  H     +   DK   C  C +  +  N  S++LH+  H+    ++C  C+ +F   Q  + H+ + H K    E   C  C ++F + ++ +RH+  H 
Sbjct:  786 LEAHGAGGEPD------APKKKKKRLPVTCDLCGREFAHASGMQYHKLTEHFDEKPFSCEECGAKFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYHTKKKHSEGKMYACQYCDAVFAQSIELSRHV---RTHTGDKPYVCRDCGKGFRQANGLSIHLHTF-HNIEDPYDCKKCRMSFPTLQDHRKHIHEVHSK----EYHPCPTCGKIFSAPSMLERHVVTHV 1001
The following BLAST results are available for this feature:
BLAST of TCONS_00022389 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZBT401.050e-2430.00Zinc finger and BTB domain-containing protein 40 O... [more]
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