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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022332 ID=TCONS_00022332|Name=TCONS_00022332|organism=Clytia hemisphaerica|type=transcript|length=623bp
CTCTTGTTACCATAGAAACCGTTCAAGTACAACGACGATGACAGTTTTGA
TGAGGAGCCTTCCATCTCAGATGTGTTGAACAGCACCAGTATTGAAGTCA
AAAGGTTGACCAAACAGATGAAAGAGTTTACTGAAGCACAACAAGAAATC
CAGAAGGATCTAGACTTCGCTATCAAACATTTCGAGGAGTTTCTGAAGAA
GAATCCTACGTCTCGAATGCGAAAGTTGACGCGAGAAGCCAAAGCCATGA
ATGAATATTTATCGTCTTATTGGTATGATGTCGGACATCGTGTCCGAACT
TTCATCAATGAAAAGAAACCATGAATAACCAAACAAACATTGTAAATACT
GAAACATTTAAAGGCTATCATCCAAAGTTGTTTTCATTTATAAGTTGATA
AAGCatgaaaacaattttcgttGAACGCAGGAAAAAACTTTATGACTCAC
CGATGTATCAGAAGAAACCTTCAACCATTGAAACAACACCAATCAATGAG
GAGTTGAACGTCAAATCGTCCGAATTTTTGTACTAAAcgtgaaaaaagag
aaaatatattactgAATGTTGTTTATATTTTGCTTTACAATCAGGTTCTT
CCAGCCACGGTTTTTACATTGAG Run BLAST on NCBI transcript from alignment at sc0000411:155324..156209- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022332 ID=TCONS_00022332|Name=TCONS_00022332|organism=Clytia hemisphaerica|type=transcript|length=886bp|location=Sequence derived from alignment at sc0000411:155324..156209- (Clytia hemisphaerica)
CTCTTGTTACCATAGAAACCGTTCAAGTACAACGACGATGACAGTTTTGA
TGAGGAGCCTTCCATCTCAGATGTGTTGAACAGCACCAGTATTGAAGTCA
AAAGGTTGACCAAACAGATGAAAGAGTTTACTGAAGCACAACAAGAAATC
CAGAAGGATCTAGACTTCGCTATCAAACATGTAAGTTGAATCCTACTCAA
GAAAAAGAACTGCCAACGTTGAATAGATATTTCTCACCAAATCTGAGGAA
GTTACTTGAAAAGAAAATTTCGAAGCAAAAATGCTTTTAACGGAAAAGCA
AAGTCAGAAAAATGTTTTTCACATTCCAACATCATTCTGGAATTTATCTT
TTTCGTCATAGTAACCCTGTACCCGCCAGCATAAAAACAGAATTATTTCA
TGCTGGTTAACACTTTGATCATGTCTTTGTTCATTCTTAACAGTTCGAGG
AGTTTCTGAAGAAGAATCCTACGTCTCGAATGCGAAAGTTGACGCGAGAA
GCCAAAGCCATGAATGAATATTTATCGTCTTATTGGTATGATGTCGGACA
TCGTGTCCGAACTTTCATCAATGAAAAGAAACCATGAATAACCAAACAAA
CATTGTAAATACTGAAACATTTAAAGGCTATCATCCAAAGTTGTTTTCAT
TTATAAGTTGATAAAGCATGAAAACAATTTTCGTTGAACGCAGGAAAAAA
CTTTATGACTCACCGATGTATCAGAAGAAACCTTCAACCATTGAAACAAC
ACCAATCAATGAGGAGTTGAACGTCAAATCGTCCGAATTTTTGTACTAAA
CGTGAAAAAAGAGAAAATATATTACTGAATGTTGTTTATATTTTGCTTTA
CAATCAGGTTCTTCCAGCCACGGTTTTTACATTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022332-exon-sc0000411-1575043694:156030..156209 | TCONS_00022332-exon-sc0000411-1575043694:156030..156209 | Clytia hemisphaerica | exon |
| TCONS_00022332-exon-sc0000411-1575043694:155324..155766 | TCONS_00022332-exon-sc0000411-1575043694:155324..155766 | Clytia hemisphaerica | exon |
| TCONS_00022332-exon-sc0000411-1510915933:156030..156209 | TCONS_00022332-exon-sc0000411-1510915933:156030..156209 | Clytia hemisphaerica | exon |
| TCONS_00022332-exon-sc0000411-1510915933:155324..155766 | TCONS_00022332-exon-sc0000411-1510915933:155324..155766 | Clytia hemisphaerica | exon |
| TCONS_00022332-exon-sc0000411-1491911889:156030..156209 | TCONS_00022332-exon-sc0000411-1491911889:156030..156209 | Clytia hemisphaerica | exon |
| TCONS_00022332-exon-sc0000411-1491911889:155324..155766 | TCONS_00022332-exon-sc0000411-1491911889:155324..155766 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000411 | supercontig | sc0000411:155324..156209 - |
Blast
The following BLAST results are available for this feature:
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