TCONS_00022270 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022270
Unique NameTCONS_00022270
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1391

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022270 ID=TCONS_00022270|Name=TCONS_00022270|organism=Clytia hemisphaerica|type=transcript|length=1391bp
atagatAATGAAAAGAAGAATCACAAAATTAATTTATACACTTTTCATAT
TGGTTGGATTGTGTCTGTCTTGCTCAGAAGTGCTGGAGTTTGCACATAGA
CTATCTATTGATGTGACTTTTCCCGACCAGGCATTGGATAAACAAACTTG
CCTGTATACGATCGAAGAATTAGAAGAAAACTCGAATTACGAACTTCGTG
TATCTTATCCAGCAGTTATACCAACGGATTTTGTTCTTGAAGTTGAAGAA
AGTCAAGGAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAACTTCA
GTGGAAAGCAGGAAGCAAAAGTTATATCATCAAAGTAAGAGCACATCGAA
CGGGAGTTCCAATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTCAAT
ATTATTGTCAACAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAAACT
CATCACCTCTATTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTTTAC
CTCGATTACTCAAGATGGTGGATGAAATGGATCACAAAGTCGAATAGttt
ttaaaaCAAGGAAAACAACTACACAACACGATGACTAAAATGAATTCGAT
TTTGCAACTGGTATGTTTAGTAACTTTCATCTCCTTTTGTCATTCCGCTT
CGTTGGTGCGACGCTCCGTTGATGGTTCTGCGTCGACGCCGTGCGCTGTG
AAGAAAATGCGGATGAAAATCTACGAGCCTGGCTGTGGTGTAGTAACGGT
AATCACTAAAGGTTGCCATGGTTATTGCACCTCCTCCTCAATGTATACTA
ACGATAAAGACGCGTTGGCTATCGATTGCAAATTCTGTAAACCAAAGAAA
ACGATTCGCAAAATGACCGTTATGAAATGCCCCATGTTGagcaagaaaac
gaaagtgattgcTTACCGTGAAGCAGTTTCGTGTCAATGTGACGGGTGTC
CTTCGTGAGCGTGAACGTGAACGTGTTTACGTAAGGTCTCGATGGATGGA
CCTTAAGCAACTTggaaaatcatttcaaaagaTTGTTATAAGATGGTGCT
AGACGTAATGAGCATCTTCGACAGAAACTGTTGAGCTGATATTCTTTTTA
GAGTGTATTGCTTGACCAATCAATCCCCAGTGGGTGAGGCTACGTTATCT
AGTTTGAGAACAATACAGAAATAGACATTAATTCATGAAAGAATCTTGAA
AGATATCACTTTCATCTAAAACGAtaaattcaaacttttcgaCAGAGACA
TTTTCTgcaattatttatttattggcATTTTGTTCGTttctgaaataaag
aaaattaagcGATTTTTCAAAACTGTTTTTCGTCTGTTGTTAGGTTATAT
ACCGTTTTACAAGGCTTTTTTTGAAATGAATTGGGTAGGGG
Run BLAST on NCBI

protein sequence of TCONS_00022270-protein

>TCONS_00022270-protein ID=TCONS_00022270-protein|Name=TCONS_00022270-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MKRRITKLIYTLFILVGLCLSCSEVLEFAHRLSIDVTFPDQALDKQTCLY
TIEELEENSNYELRVSYPAVIPTDFVLEVEESQGRISNRKLLNVEQLQWK
AGSKSYIIKVRAHRTGVPINLKRLQDPVPFNIIVNRLYLGCSLATWKLIT
SIVFTIVLVLKFSLPRLLKMVDEMDHKVE
Run BLAST on NCBI

transcript from alignment at sc0000410:214414..229551+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022270 ID=TCONS_00022270|Name=TCONS_00022270|organism=Clytia hemisphaerica|type=transcript|length=15138bp|location=Sequence derived from alignment at sc0000410:214414..229551+ (Clytia hemisphaerica)
atagatAATGAAAAGAAGAATCACAAAATTAATTTATACACTTTTCATAT
TGGTTGGATTGTGTCTGTCTTGCTCAGAAGTGCTGGAGTTTGCACATAGg
taaagaaatttattttgccTTTTACAACTTCTTCTAATCAGCGGTGTAAG
GTATTGCAGTCCCAGATgcgaaaatctttttgaattgCTACCAATCCTAA
CAATGAATAATTATTCTACTTTGTAATTTTAGACTATCTATTGATGTGAC
TTTTCCCGACCAGGTATGTGGTTTTCACATTTCTTGTAGGAAACAGTCAA
AAACAGTTACAGTTCATCAAAGCAATATTCAACGGGTACACTATTTagat
tcaaagaaaaaactGATAATTTGACCTTATGATGAAAGAGGGCAACGATG
TAAGTGAAATAATGATATAATGTTaccaattttcttattttctgaaACTC
TTACTTTTTCAATCAAGGCATTGGATAAACAAACTTGCCTGTATACGATC
GAAGAATTAGAAGAAAACTCGAATTACGAACTTCGTGTATCTTATCCAGC
AGTTGTAAGTCAttgcttttgaaattttcatttccttGACGCAGTGTTTC
TGCCCTAATAAGATGGATCAggggggggcaagcagttagtacacgaCACC
CATGAcacttagtaccgtggtgggtccatttttcaaattttcaaaatgca
gTTAGTACTCCAGTGTACTAACTGCCAAAAGGGGTGgtgtatattttcaa
atttgcaaaaaacaGTTAGTACACCTGTGTACTAACTGCCGAAAGGGGTG
GTGTATACagaattttggaagaaaaaaggtgtattaactgTTTTCAAAAC
GAGAATTTTAAACTAGATttctcagatttttactgttatCAGTTTATGAG
AGGTTTATGGTtctatcttttttatttatcttcttTCTAGGACAGTCAGG
AATAAACAGCTTGACACATGACATTGCAATTCTAGGAAGTCTTAGAACTC
TTAGAAATATTCGaaataaaacattcgaatttgaaaatttcgaacttTCA
AacgttttctgttttgttttggtaATCGGATCATCCGATCCATAAtcggg
aaaaatagaaaattatctAAAGATGGTGGATAAGTTGCTGAACAAACATG
CTGTGTTTTCTGTCTAAAAAATGTTTCTGGAAAGTCATTATTGTCACTTT
AACTAGGTTAGAAACTGGTTAAAActacttttttcctcagtttcATCGAG
AGATATGGTtatactttttacaaaaaaggaaaaactgggaaaatgactct
ttttgtgtgtttttgtCTCGTTTTTCCTGATAGTGTACTGTATATCTGAT
TAGAGTGACCTGTATATAATCTGCTGTAATTTGTTTTCACatgattttaa
taattttttacatgatcggtttagaaataaaaaactaaGATACTGAAATG
CAAATATGGGAGATAAATCATAAgaatacaaactgtgaaagcTTCAGAAA
ATGTCGTCACTGTGGTGAGATATATAATTTGAAATCTGTAGGACACAATA
TCCAGAATTGAGGCATGTGCCACCcgtaaaagaaaaattcaatcaGCTTC
CATAACataatttgttatatttttatttgtttgaaagTAGTTAGTGGTAA
ATACCTGGTAAAGACAGGTAAAAACATAACCTCCCTGGGGTGTGAAATTC
ACCTGGAATGCACCGTAGAGAGACGGATCCTTATTTTGGGGGGTGGTATA
TATATTGAGCAAGGTCAAAGACAGTTAGTACACAGTGTACTAAGTGACAG
GGGTTGGTGGTGGGGtacagatttttccaaaaatcagttagtacacataG
TGttctgtactaactgcttgccccccccccctggatggATACAAATGAAC
ACAAAAGTTTAAATGTGAAGGTTTTCTCCGTGAATCTTTTCtgtcaaata
tattttattctCGTTTGGACATGGAACAGAATAATGAAACTTTCTTATTG
CACAGTTTTTCTTttgcaagaaactttttgaaataaaacagcATGGGGCT
GTATGGGGCTGTATGGGGCTCATTGTTGACGTAAAGCTAAGAGCCATACT
AAAACACTCTCAgcctcaaatttcataaaatggcaaagaaaatgttgatt
AATTAAGCCCTGCATTAAGTTAATGTATGAGTAAAATAAGCATAAAGTGA
GTAATCCTGGTAATaacgaaaaataagaaaagccaAGACTCGACCAAGAG
TTACTGGTTTCTATTCTTGATATGTATAACTCAATTTTATAGCGTAAATa
ccagaaaacagaaaaaagccGGGGAAAAACCCCTctttgttactaaaaat
agaaacaaggTACCTttagggaacttattttggcgggaactaattttggc
gagcaacaaaaatttaaaaaaagtttaattttggcgggaactaattttgg
cgaatagtgaatttttttaattttggcgggaactaattttggcaaatgac
agcgtaaatctgttttattttgccttattttgagcaattttgatgaattt
caggggttatttaggcaaggaaacaaaaaattttattttggtgggaactt
attttggcgagtgagcaaaatatttaattttagcgggaactaaATTCCCC
AAAATTAGCtgccgccaaaataagttcccttaaggtagtcaaaatctgtc
aaaatccgaccttttttgggtgcttccgttaggAAATTTGACGTAATCAA
TTCTAAACAATTTTCTCTGTAGATACCAACGGATTTTGTTCTTGAAGTTG
AAGAAAGTCAAGGAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAA
CTTCAGTGGAAAGCAGGAAGCAAAGTGAGCTTTCATATAATTcctcattt
ttcaaattctataGTTCTAGAATGTTAAAATATAGGGGAACTTTAAGTGA
TTTTTATAGGGTACATCCTTTTTTGGCACTCTTATCATTACATTGTAATA
TTATGTGACTCTGGATACTTTTTTGTTCTTCCCTTATTTGACAACAAAAG
CGAGTTTATGGTAATAGGTTTTGGTTTTAGGGCAAAAATAAATAAGTGCA
CCCGTACCCTAAAGACCACTTAAGAGTTCCCTTTTAAGCTTAGTTCTTTC
CTTCTATTTTGAGTCAGTCAGAGTTTGATTTATCGTATTCATTGCTTTTA
ATCACAAAACGTCCATTCCTTTCTCACAGAGTTATATCATCAAAGTAAGA
GCACATCGAACGGGAGTTCCAATCAATCTGAAGCGTCTTCAAGACCCAGT
TCCCTTCAATATTAGTAAGGTTATTTTAAGTCATTTTTCCTTTTTGCTGT
ATTTAGCTTTTGTATTACATTTCGCTGTCTGAAGCTCTCAGGGCGAGAGA
AGCactcttttgaaaaagaaatatcgGAATATTTTGACAACTTATGCATT
CACGATCCGTTTACTGGGGACAGCCCCTTAAATAGTCGGAAGGCTTAGTT
TTCAGTATTATTTATTTTGTCGAACCTTTAATTTTATGTTTAGTTGTCAA
CAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAAACTCATCACCTCTA
TTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTTTACCTCGATTACTC
AAGATGGTGGATGAAATGGATCACAAAGTCGAATAGGTATGTGTTTTGGT
GATTGGTTTTATTTGATTTTCGTCAAGTTTTCTAACACTGTTGAAAATTT
CTATCTCATAAGGTTCTGCAACCTCGTCCctgtgtattccaggctttatt
aaTGTTACTTACGGACATCAGAGAATAactacgcagggaacgaggttgaa
gGTTCTGTTCTCCGTCACAACGAAATATAGAAATAAACTACCCCGTCTCC
AGATTAAGCAAAATTCGTTAATAATGTAATAATTAGAAAGATCAGAGCTa
cctgtaccagacgaccacgtcgtgataaaaaaaattgcgtgcTGGGATAG
GATCTACCTTTCCTTGTGTAAATTTTAAATTCCGCTTGGCACGAATCTTT
TTTATGAAGCTTTCTAGACAGAGTTTTCCGCGTAAGTGATGTGATGGGAT
TAGCGTGTGGGAACCTTTTACAGCATGCACCCTTTAGAGAGGCGGAGCTC
AATGCAAGGTAGTTTGCAAATGTTAACAATAGACAtacaatcaaatcaat
aaccCTTTATCATTCTATCCCTAACGATTGTGTGATAAAAAAACCTGTAC
GAgtttgtttgcgtcatataggGATCATTTTAAGGAGAGTGCTGTGCTCA
GCGGAAGTAAAATATGTAGCTCTTGATCAATTGCAAGATTATCGTGGGAT
ATTTCTTTCTAAGGCATTGGATATGCTGATAGAATTTCTAGACACCCCGG
ATATTGTGTTTGTGATTCTAATATACCATTTGTTTGTAAGGGAGTGGATT
TTATATTTGTGTGTGGGTGTGTTCTTGTATAAAAAGAGATCTCTTGCAGG
GTTCAGGATGAATATAGTTAAGCAGTAGTAAAGCTGGGGAAAGTGCTGGA
AGGAAGGTCATTGCAGTGCTCTGAAAATGGATTAgatattaaatttcaaa
ttgaacGTTGACAATTAGACTTAGATTTTAGGTCAATTTTGAACTTATAT
ATCAAGCAACAATGCGGAACAACATTGAAGTAAATTTTCAGtcgtttgtt
ttttgttggaaCATTTTATGGCTTCGGTGATTACACTCGCAGATGAGTTT
GTTTGAGGTTTGAATTTTTGACCTTGCTAATACCAGATTATATATTCATA
CCCGTATGAAGATTTCTTTTCAATCAGCTAAACAAATGTTAATCGATTTT
CAAAGCGCAATTTTGTGGCCATCTGAGTTATTTcggttatttaaaaaatt
tatgttttgagCAATTACCCCTCCTTTTTGTTGCATTAGTCGAATTGTtt
cctttttaaaaacaatttaacgactgtggtttttttctgaaatcatATAA
ATGAATGAAATTGTGTAATCACTTCTACTTGAGCGAGATCTCAAATTAAT
GTTTGGCGTTTTCAAACACTGGCCGCTATATTTTTCATTCATCCCAAGTT
CAACTTATGGTGACTATAAACCCAAAGACATTTTTAAGGCTCAAAGACTt
tattaagttatgatgatccCATTATCAGATTTTGGCATTAATGGTGTTTA
TTAATAACTTCTCAAGGCATTTTGAACGCACAATATAATTATAGAAAATC
CATTTCTCCTTTTCTTTTGAGGCGATTAATGGCGTATTTCTTTGATGCTA
TATATAGAGTGTCAGCCAACCGCATGTGTTTAATTAAACGTTGAATCTAT
TGACGGGTAATGAGTATTTCATAACTcattaaattttctgatttggCTTT
GGTGGAATCAACACCTCGTGCATTACATGATGATGATGTCTTTATTTTTT
GCAGAACTTGGTCATATCTAGCCTGGGAATTCAAGCGCTAAACTTTTTTC
ACGGTCTAGATTTTGATATTGCTATGTTGGTTTACCGTTTATTGCAGATA
GCTCGCTTGCAGGGAGATTTTGATTCATCAAAGtttgtcaacaagggttc
acacacagacggTATCAAAGATTCTGTATCAGACTGATTTAGCTGCACCA
AGCTAAgaaattttagaactttgtgatctgatatattttttgttttttct
gaaattttgaacttGGATTCCCTGGCTAGACCTTATGAATCTTTTTGTCT
TCATGCTGGTACGTCAATTCTGGTGCAGATGCTAATATAAAAGCTGATTT
ATTTAGGTGATGTCCTTTTTGTTCTGATGTTTTTAACAGCTTACGCAACC
TTTTGCGGTGTTGATGGCTATATTTGTAGTACCTGAAATTTATCTAATTC
ATATCTAAAGCATAAAAATTTGGATGCTTTGATCTTCAAATTAATTGGGA
AAATactgaaaacttaaaatttcgCAATTCAAATAATTCGATATTGTTCA
GAAAACGGTATCAGTATCTATTCAGTGCTAGGCGTAAATTGGTTGCATTT
GTTATAATTTGTTTTAATATAGAATTCTTTCAAATGTATCAAGTCAGCTT
TTTGCTACGTAATATTTTGTAATGAAATTTTTCGACGGGCGTCGGATGTT
TATTTTGTTTAGTTCCTATGGATAATCTTCAGGCAATGCCTCTTGACTTA
AACCCCTCATTCTTCACATAGCTTTAATTGTCCATACACTGCTGGCGTTG
AGTTTGTTTTTGTCTCGGATTAGTCTTAATATTGTCTCACAGCTTCTTGT
TTATTAATGAGAATTTTTCTAATGATTGTCTAGTTCTTGGAGATTGGATA
TTTTTATTGATATAGGCGCGCCTCTCATGCAGACACAGCAAAATTTATGC
AGGTGCATAGTTTAAAAATGCTGGGTAAGCAAATGGTCTGACATTCGTTA
TAtttactgacctttatatatccctggaccaagctacatccgccatcttt
gatcgaagttgcagtgctaaaaattaacgtctaacggcgctacatcatca
aaagttttcgagggatggtagatctagcgctctcgatgcatttaggGTAC
CAcatgccgccattagggtaccacatccgatcaaagatgaccgggattga
gaaactcgGTCCatggtatataaaggtcagtggtttaTGTCAAATTTTTA
ATGATCTGTTTATTCCCAATCCCTACTCAAAGCTTTTTACATGCGTCTAT
GCTTCTGAAGAATGTCAATCGAGATTTTCCTGGGAATCGTGGAAAGCTCT
TATTTAGAGTGAAAAACTAAAAGAGTTGAGTGTGAAATCTTGAATTTTAC
GAGAAATTTTAATTAGTTTGAGCCGGGCTTTCAACAGTATGCTTGTCCGA
AATTTGTGGTATATAAAATGCTGAACGATACGGGGGAGTGTTTCTCGTTT
CCATTTATATGTGTTATCCAGTGTGCTTACTTGATCACTCCTTCGCTGTG
TTCCATTCCCATGTGACGTAGTTTTGTGGTAGGATTAATGCAAAGTGCTT
TAAAACTCACAAGAAGATTTAGCGAGAGATTAAATCATTTTTCATCAACA
ACTTTACTTTTGTTTATTTGGCTGCAACATGAATCTTTTGACACATCCTG
TTGGATATGTTCCAAGAAGGTTGCCAGGAGGAGTATTGATGGTCTGTGCT
CTAGAACATTCTTTGTCTGGTACAGTGTACAAAGCTCTTCCTTCTCGGAC
GGATTTTCTTCTCAGTGAGGTACAAAAGCAGTGGTGGTCTGTGCAGAAAT
TTTAAGGTACCTCTTGATTTCTGTcgaaattttagaaaacttcCCTGtat
ttgtcaagaattttcatTGACCCCCTCTCCCTCTTGGATTATCTGGTATT
TTAGGGTACCTCCGGAAAAAATGACCACCTGAAAACTGTTTCTGTTTATG
TACTATTGTCTATAATATCACACGTTTTCTCTTATGATGTACAATCATAG
GGGGCGGTTTGATGGTTTGACGCTATTACTTTTTTTTCTgtcggtgtttt
ggtgtttgaaaacaaaaagtacgcggtatttcggtgtctcgGTGTCATGT
GGTGACAAAATATGTATTTTTGCGATTTTCGGTGACTGTGCTGATAAGAA
AAATGCGTCACGCTGTTCTCTTACACCGCTTTTCATTAGTCAGCACAAGA
TTTGATCTTTTGCTTCCTTCTCTAATCGGATCCTTTAAAtctcattttga
agaataaagCCTTGCAGACACAGAAAATGAATTTAGAATTTAGAAGTATG
CAAATATAGCTTCGTCTTCcagaaggaattttttctttcatgaaATGATA
CTAAAAGAATAAATTTATGTCAATGTACTTTATCGCTTTTTCTAAGATGT
TAAGGCTcaatatatttttaattctGTCCTGTAGCACGTGCGCTTCCTTC
AATCACCTTCAATATTTCCTTCTCGGTTTTTGATCTTGTTAATTTGATTA
ATTCTTCAACGCGCTGAATAATCGGTGAACTAATCTTACGGAAGTGATAT
TCATACATTCTCGTTAGAATCTTCTGTGTGGTATAAAATGGTGTCTCTAT
TCTAATCTTTCGACAGTTGATGTGGGACGTCTGTTGTCTGTTAACAAAAC
CTCTTACACCGAAACAGTTTTCTCCGTATGttaatttttgttcattttgg
cCTGAAAAACTGACCAAGATGATAGTTTTGAAATCTAGAAACTTCTACTG
GACGATACTTGTTAATTTGAATGGCATCCATCGAATGTTTCTTTTAGTAT
GAAGgattttgtttgtgtttttttttcgtaaTAAGAACactaattttttg
aaacttcaGGCTGAACTTTTCAGATCTTAAAGCTTTAAAAGCTTATATTA
agattttcccattttcagCAATTTGTGTGAATCTTACttcaattttctaa
gaaattgatggtttttgagaacatagtcttaaaatgttcttataatttta
TGCCTTGAAGCCGTATGTTCTTACCCagcaggcacacaacgttgtttcaa
cgtttatctaacgttcacaacgtccatataacgttagattaacgtttaaa
caacgtcgtgtgcccgCTGGGTATATATTTTGCTcttattgaaagaaaaa
ggtATATGCGTTACGCATGAGTACGAATACCCTGTcagtttttttgtaaa
tattgtaaatattttcctCCAACTTTGAATTAGTcaaactattttctttt
ttcttcctttGCTGTTCTTTAGATGAATGTTCTTTTAACATTTCACAGTT
GTACAACTTTTCTTAAGATGTGTTAGGAATTGGAAAGCTAAGGTAATTTG
ACCGTTGATAATTTCGGATCTGGTCTTTAATGAAACTAATGAGTTTGTCA
GTGGCTAAAGTTAAAAATGGAAatccttgtttttattttgcacTTGCAAA
GCATGCCCGTTAAAAGTAtgcgatattcaattttttcttatcaGTAGAAG
TAACCAGTAATAAGCAGCTATATTAACTGTCATATCTGGAGCATACCGTA
GATTATTGACCAACGTTAAAAAGTATTTGTCCCAGGTTCTGGAGCtcttt
ttttcatgaatcttgACTCCTGGTTGGGTGAGTGAAATTTCTTTACTTGA
ACAACCCTTCAGACGTTTTGGCAAGATAAATGGTTTGTTTAGCTGTGGGA
AATTCGTCCAGCTATGCTTTTGCAATCTGATTGATCTTCTTATCGTGGGT
TTATTGAAGCACATATGATCGCTCTATTTATTGGCTGTCATTAAAGTGTT
AATTCTTTCGGTTCAATACCCTACAAAATCCATTCTCCCACACGAGCCGT
TTCCAAGACGACGGGTTTACTTCCGTTCAAAAGGTATCTTAACTTCCTTT
TAACACTCGACTTTACGTATTTCTGCAGGATGTTTGTTGAGTGAGAGGTT
TCTATGGAGCAAGATCAATTTGGTACTTTCCCTTTCGTCCAACGCACTGT
CTGTAGGATGAGGTTTGAGGATAGGGTCTATCAACAAGTTCTTAAGATTA
AGGTACGATAACGAAGGCTTGCTCAGGTGCTCAAAAAGGATCGTTTAATC
TCCTTATATGGAATTCCCGAATGGTACAACTTCATTTAAAAGGTATTATT
TTAACGCTCCGACCAATCAGCATAAGGTACTATTGTTTGTTGACAATAGA
GCTTCATCTttataaaaaactatttaaTTTTTATAGTGCAGTGGGGCTTT
TTTAGTATAAAAAGCTCTCAATCCAGCCTCCCAGTCGCAGTTGCTTGCTC
AAAGAATAGAGGACCGTGAATCTACTTTCGCCTTATCCTTCAAAGGGGTT
GTTTACAATGAAAACAACATTGGTGGTGATACTCGTATATAAATGGTTCG
GGTGTTTCTTTACTTTTGTCTATCACTTCTATTTATGGTATGATGAGTAT
AGTAAGGAGTAAGCAAAAACTGTTGGAATTAATTAGTTTAAAATCTTTGA
ACATTTTGCTAACTTACTTGGTTCtccaattatctttttatttggtCTGC
TCAGTTGCAGTTAGATTCGAACGCAACTTATTATCTGGAAAAACATTGTA
AGACCTATTAGACGAATCTTATGAGATTTTGCTTTcggtcaaaaatcgaa
aatactaTTAGGTTTGTTGAAGACCGTTGTGATAGAGTAGGCTGCACGCA
TTGCCTCCGATATGTATTGGTATAGGGGttgcgtatcgtgtatgaaattt
cCTTCCAAGAGTTTCCTGAAATTTAAAGTAACCTGCTTCAACTTATATCG
TTTTCATTGCCTCTGCACAAATTTGATAACACTGATATGACTCTCCTTCG
TTTTACGAGTATAGCGTAACGTTCATTTAGTCTGTTCGGTAAAATATACC
CCCTTAAAAAGACGAAGACGGAGGtaactcttggatgggaaatttAAACA
CGATACGCAGCTCCAAGTATCAAAATTAATTTCGGGGATGAGTGCAGCCT
GGTAATAGAGCAGAACAGACGGTTTTTGGTAATGCTACTGACTAAGAACT
GTGAAGGTGGAACGACTGAGAAATCCTCTAAATCTTTCTAGCTTTGTCAT
ATTTTACAAACTCAAGCTTCTATTTGCAAGTATTTATCTATCGAAAATTG
CGTCATGCGTCGAGAGGAAAAATCCTCGTTTTAGACTTCTTGGTTTTTGT
CTCTGCGGttcaaaaatagaaattcaTTCAGCTCGCTTCTATATTAAGAA
TGTATtactttttgatcaattttcaCGGTATTTTTTAAAACCGACCAAAG
TTCTTTTCATTGGGTGATAAGTCTTTATGTATTAACGAACATCAAATTGT
TATGACCATGTTTTGACCTTATTTGGAGGACCTTAATCTCTGATATCTAT
AGccacaacatttttcaaagatgaTTCGGATGCCCGTTTTGAGCTCAAAA
AAATTGTTActtcttttgatgtttttaaggcGTTTCTTTACCCTCCCTCT
GGTCAGTGAAACTTGATATAAACCCCCTTTGAacctcctgtttctttata
caaAGTAGCAAAGTCTACTTCTGGAGCCTATGGTACATTGGAGAGTtgat
gtatttgcacttttggggACGGCAAAtaggccactatgtcttcccgtgtg
cagcagcttgtgcaaagggattttatgattgaatattgttccttgaatgt
agaagatcaaaatttgagaggtggggcNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Cacattacaggcaaaatttaaaaatatcaattttggctcatagacttctt
aaaaaggattttcagactttttcataataatattttttgttcactggaag
gtacttattccaaaaaaccaaaagtttttgaattttggcaaattcttatt
tttcgatgacgtcatcgttttatgacgtcattttgccttatttccttaat
atctcctgatatattcattttcagatataggttgtgacctttttcttTAT
CAGTTTTTCATGCTCTTTCGACTGAAACAAAAttttttcaattttgatga
ctttttattttggttgccatagtaaccaatgacgtcagtttccatggcaa
cgggtggtcacacccggctccacctctcaaattttgatcttctacattca
aggaacaatattcaatcataaaatccctttgcacaagctgctgcacacgg
gaagctttttcgcgacatagtggGNNTTTTGTCCcgcaaaattgaggacg
gtaaagctgcttgtttaccgtcgtcctcagttgatcaggatctagtcaaa
tcagaagctaaccgtctccATCGCTGGAAAACACATGAGCTCGCCCAGAC
TAACTAACTTTTCCAGTCTCAGTTTGAGGGTGATTTACTTGCTTCTTTTT
CGTCCTTATGCAATGTGGAGAGGGTGTTCTTTTATACTTCATGAAAAGGA
AATAATCTATCCCCAATTAAGTTCAACGATGTTAGATTGCATTTCTTGTG
TTTCCTgtgctttttatttttagatgagTATTTTTGAGCAGTCGTCCTTA
AAACAACACACGGCGTCTTTGATCGACCTCAGCAGTTGACTATTACGAAA
GTGTCTTTTTTTTCGGGTTAGATGTTCAGACAGATTGGTAGAAGATTGCA
TTCTCGTGAACTCTTCCATTGAAGTTTGGTGATGTAATCGTGCATTGATT
CGATATAAAAAACGATATATTAAAAATCCAACCAATCAATGATTTCGAAG
TTTAAAATGTCAAAGAATAGTACAGTCAAGTCCATAACTTGAACACGCGc
gggaacacaaatttgatcgagttatggagtaacgTTTATTAACTGAAGAG
ACgatgttcgagttaaagagactccactgtcattgatttagatttttgaa
aCCGGCTGCCACTTTTCCAACTTCTTTGAAGTTCTGCTATTTCCTGTGTC
TTGGTGGTCTAGGCCCAAACTTCCAAATTGTTGATGTGGCGGTCAAGTTT
GTAAGAATTTGTGACGTTTATTTGAGAGAGGGGAGATCTATTTTTAAAAC
TGCTGTGACCTTTAACACCTCGTTTTACGGCGCGTGAAAATGTCAACTAT
TTCATACACACGCCTGAAGAGGCTTTTCAAACCTCCCCTATTTcacattc
tttttttaatctaCTTACGAATGCTATGATCTCTTGTAATTGTCTCAGCA
GATGGGTTTATGTCAGTGTTGCGTTGTTGTGTAAGGCGTTTGGTCGCAGA
GTATTTTACTTATTGACTTTCGCCTCACCAATGCCTAACTAGTGTTCAAC
TTTCAGGGAAATTACATTGTACGAATCTAATTGAAATATTGCAGGGCCTG
TGTCTCCGAAACATAGTCTGACCAAAATGTCGTAAGCTTGGATTTTTATt
cgtattttaacttttttgttttgttttttgatgtAGTGTTCCATTTTGTA
ATTTCGAACTTCGTCAGATATTTATTTAGCCAAGAAGACAAAGTAAGTAA
GATCAAAATTGactttcgaaactctctatttaGCTTGAAGTCTGAAGTAC
TTAGATAATTTTTGGAACATAGATCCCCTTGCCTTTATTTTCTTTTGCGA
TGACTTTGCGCAAAAACAAGGTAATCGCATGCCTCGCATTTTCTAGTTCA
AATTCACGTTGTCTAAAGTATCGAAAATCTTTTTGGTTTGGATGATGATT
CGAAAGTTGTGTGAATGAAGTTATATGTCGCGACAGCATTAATCGGTCCG
CTATCACAATGGTTTGTAAATAAGGTGCAACCATGCAAGTTGTAAGATGT
TGAGTTTTTGTCAGATTATAACTGTTTTCGTCACTGTCCCTTCATCTTTT
TTTGGAAGTTTCACACTTAAGCTTCACTGATTCACTCAGCAAGATTATAG
CAGTGTTTGAGCGAGTGGTTGAGTGTGTATAAATACTATGATTGATTCGT
GATCGTGAGAACTTGTCGGATAATGCACCTCTGCTTTAGTATTTTTAAGT
TTgtcatttcattttttaatcaCCGTACAACTGACTTTGAACTAAACAGA
GTGCCCAAGGGGTATCATATTTAGAAAATAAACCAAATGAGGAATGCATG
AGAAAGCAAAAAACTTTTAAGTATTGGTATTTTAAGTATCATTTTCTAAT
ACGTTCATTCCTTTccttttcagtttttaaaaCAAGGAAAACAACTACAC
AACACGATGACTAAAATGAATTCGATTTTGCAACTGGTATGTTTAGTAAC
TTTCATCTCCTTTTGTCATTCCGCTTCGTTGGTGCGACGCTCCGTTGATG
GTTCTGCGTCGACGCCGTGCGCTGTGAAGAAAATGCGGATGAAAATCTAC
GAGCCTGGCTGTGGTGTAGTAACGGTAATCACTAAAGGTTGCCATGGTTA
TTGCACCTCCTCCTCAATGTATACTAACGATAAAGACGCGTTGGCTATCG
ATTGCAAATTCTGTAAACCAAAGAAAACGATTCGCAAAATGACCGTTATG
AAATGCCCCATGTTGagcaagaaaacgaaagtgattgcTTACCGTGAAGC
AGTTTCGTGTCAATGTGACGGGTGTCCTTCGTGAGCGTGAACGTGAACGT
GTTTACGTAAGGTCTCGATGGACCTTAAGCAACCTggaaaatcatttcaa
aagaTTGTTATAAGNAAACGTGTTTACGTAAGGTCTCGATGGATGGACCT
TAAGCAACTTggaaaatcatttcaaaagaTTGTTATAAGATGGTGCTAGA
CGTAATGAGCATCTTCGACAGAAACTGTTGAGCTGATATTCTTTTTAGAG
TGTATTGCTTGACCAATCAATCCCCAGTGGGTGAGGCTACGTTATCTAGT
TTGAGAACAATACAGAAATAGACATTAATTCATGAAAGAATCTTGAAAGA
TATCACTTTCATCTAAAACGAtaaattcaaacttttcgaCAGAGACATTT
TCTgcaattatttatttattggcATTTTGTTCGTttctgaaataaagaaa
attaagcGATTTTTCAAAACTGTTTTTCGTCTGTTGTTAGGTTATATACC
GTTTTACAAGGCTTTTTTTGAAATGAATTGGGTAGGGG

Coding sequence (CDS) from alignment at sc0000410:214414..229551+

>TCONS_00022270 ID=TCONS_00022270|Name=TCONS_00022270|organism=Clytia hemisphaerica|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000410:214414..229551+ (Clytia hemisphaerica)
ATGAAAAGAAGAATCACAAAATTAATTTATACACTTTTCATATTGGTTGG
ATTGTGTCTGTCTTGCTCAGAAGTGCTGGAGTTTGCACATAGACTATCTA
TTGATGTGACTTTTCCCGACCAGGCATTGGATAAACAAACTTGCCTGTAT
ACGATCGAAGAATTAGAAGAAAACTCGAATTACGAACTTCGTGTATCTTA
TCCAGCAGTTATACCAACGGATTTTGTTCTTGAAGTTGAAGAAAGTCAAG
GAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAACTTCAGTGGAAA
GCAGGAAGCAAAAGTTATATCATCAAAGTAAGAGCACATCGAACGGGAGT
TCCAATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTCAATATTATTG
TCAACAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAAACTCATCACC
TCTATTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTTTACCTCGATT
ACTCAAGATGGTGGATGAAATGGATCACAAAGTCGAATAGATGAAAAGAA
GAATCACAAAATTAATTTATACACTTTTCATATTGGTTGGATTGTGTCTG
TCTTGCTCAGAAGTGCTGGAGTTTGCACATAGACTATCTATTGATGTGAC
TTTTCCCGACCAGGCATTGGATAAACAAACTTGCCTGTATACGATCGAAG
AATTAGAAGAAAACTCGAATTACGAACTTCGTGTATCTTATCCAGCAGTT
ATACCAACGGATTTTGTTCTTGAAGTTGAAGAAAGTCAAGGAAGAATTTC
AAATAGGAAACTTTTGAACGTTGAACAACTTCAGTGGAAAGCAGGAAGCA
AAAGTTATATCATCAAAGTAAGAGCACATCGAACGGGAGTTCCAATCAAT
CTGAAGCGTCTTCAAGACCCAGTTCCCTTCAATATTATTGTCAACAGATT
ATATTTGGGCTGTTCTCTGGCCACCTGGAAACTCATCACCTCTATTGTTT
TCACTATTGTGTTGGTCTTGAAGTTCTCTTTACCTCGATTACTCAAGATG
GTGGATGAAATGGATCACAAAGTCGAATAGATGAAAAGAAGAATCACAAA
ATTAATTTATACACTTTTCATATTGGTTGGATTGTGTCTGTCTTGCTCAG
AAGTGCTGGAGTTTGCACATAGACTATCTATTGATGTGACTTTTCCCGAC
CAGGCATTGGATAAACAAACTTGCCTGTATACGATCGAAGAATTAGAAGA
AAACTCGAATTACGAACTTCGTGTATCTTATCCAGCAGTTATACCAACGG
ATTTTGTTCTTGAAGTTGAAGAAAGTCAAGGAAGAATTTCAAATAGGAAA
CTTTTGAACGTTGAACAACTTCAGTGGAAAGCAGGAAGCAAAAGTTATAT
CATCAAAGTAAGAGCACATCGAACGGGAGTTCCAATCAATCTGAAGCGTC
TTCAAGACCCAGTTCCCTTCAATATTATTGTCAACAGATTATATTTGGGC
TGTTCTCTGGCCACCTGGAAACTCATCACCTCTATTGTTTTCACTATTGT
GTTGGTCTTGAAGTTCTCTTTACCTCGATTACTCAAGATGGTGGATGAAA
TGGATCACAAAGTCGAATAGATGAAAAGAAGAATCACAAAATTAATTTAT
ACACTTTTCATATTGGTTGGATTGTGTCTGTCTTGCTCAGAAGTGCTGGA
GTTTGCACATAGACTATCTATTGATGTGACTTTTCCCGACCAGGCATTGG
ATAAACAAACTTGCCTGTATACGATCGAAGAATTAGAAGAAAACTCGAAT
TACGAACTTCGTGTATCTTATCCAGCAGTTATACCAACGGATTTTGTTCT
TGAAGTTGAAGAAAGTCAAGGAAGAATTTCAAATAGGAAACTTTTGAACG
TTGAACAACTTCAGTGGAAAGCAGGAAGCAAAAGTTATATCATCAAAGTA
AGAGCACATCGAACGGGAGTTCCAATCAATCTGAAGCGTCTTCAAGACCC
AGTTCCCTTCAATATTATTGTCAACAGATTATATTTGGGCTGTTCTCTGG
CCACCTGGAAACTCATCACCTCTATTGTTTTCACTATTGTGTTGGTCTTG
AAGTTCTCTTTACCTCGATTACTCAAGATGGTGGATGAAATGGATCACAA
AGTCGAATAGATGAAAAGAAGAATCACAAAATTAATTTATACACTTTTCA
TATTGGTTGGATTGTGTCTGTCTTGCTCAGAAGTGCTGGAGTTTGCACAT
AGACTATCTATTGATGTGACTTTTCCCGACCAGGCATTGGATAAACAAAC
TTGCCTGTATACGATCGAAGAATTAGAAGAAAACTCGAATTACGAACTTC
GTGTATCTTATCCAGCAGTTATACCAACGGATTTTGTTCTTGAAGTTGAA
GAAAGTCAAGGAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAACT
TCAGTGGAAAGCAGGAAGCAAAAGTTATATCATCAAAGTAAGAGCACATC
GAACGGGAGTTCCAATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTC
AATATTATTGTCAACAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAA
ACTCATCACCTCTATTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTT
TACCTCGATTACTCAAGATGGTGGATGAAATGGATCACAAAGTCGAATAG
ATGAAAAGAAGAATCACAAAATTAATTTATACACTTTTCATATTGGTTGG
ATTGTGTCTGTCTTGCTCAGAAGTGCTGGAGTTTGCACATAGACTATCTA
TTGATGTGACTTTTCCCGACCAGGCATTGGATAAACAAACTTGCCTGTAT
ACGATCGAAGAATTAGAAGAAAACTCGAATTACGAACTTCGTGTATCTTA
TCCAGCAGTTATACCAACGGATTTTGTTCTTGAAGTTGAAGAAAGTCAAG
GAAGAATTTCAAATAGGAAACTTTTGAACGTTGAACAACTTCAGTGGAAA
GCAGGAAGCAAAAGTTATATCATCAAAGTAAGAGCACATCGAACGGGAGT
TCCAATCAATCTGAAGCGTCTTCAAGACCCAGTTCCCTTCAATATTATTG
TCAACAGATTATATTTGGGCTGTTCTCTGGCCACCTGGAAACTCATCACC
TCTATTGTTTTCACTATTGTGTTGGTCTTGAAGTTCTCTTTACCTCGATT
ACTCAAGATGGTGGATGAAATGGATCACAAAGTCGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012487XLOC_012487Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022270-proteinTCONS_00022270-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022270-exon-sc0000410-1491911889:214414..214512TCONS_00022270-exon-sc0000410-1491911889:214414..214512Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:214414..214512TCONS_00022270-exon-sc0000410-1510915933:214414..214512Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:214414..214512TCONS_00022270-exon-sc0000410-1575043694:214414..214512Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:214646..214676TCONS_00022270-exon-sc0000410-1491911889:214646..214676Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:214646..214676TCONS_00022270-exon-sc0000410-1510915933:214646..214676Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:214646..214676TCONS_00022270-exon-sc0000410-1575043694:214646..214676Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:214881..214967TCONS_00022270-exon-sc0000410-1491911889:214881..214967Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:214881..214967TCONS_00022270-exon-sc0000410-1510915933:214881..214967Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:214881..214967TCONS_00022270-exon-sc0000410-1575043694:214881..214967Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:217186..217287TCONS_00022270-exon-sc0000410-1491911889:217186..217287Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:217186..217287TCONS_00022270-exon-sc0000410-1510915933:217186..217287Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:217186..217287TCONS_00022270-exon-sc0000410-1575043694:217186..217287Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:217643..217727TCONS_00022270-exon-sc0000410-1491911889:217643..217727Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:217643..217727TCONS_00022270-exon-sc0000410-1510915933:217643..217727Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:217643..217727TCONS_00022270-exon-sc0000410-1575043694:217643..217727Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:217957..218099TCONS_00022270-exon-sc0000410-1491911889:217957..218099Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:217957..218099TCONS_00022270-exon-sc0000410-1510915933:217957..218099Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:217957..218099TCONS_00022270-exon-sc0000410-1575043694:217957..218099Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:228637..229074TCONS_00022270-exon-sc0000410-1491911889:228637..229074Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:228637..229074TCONS_00022270-exon-sc0000410-1510915933:228637..229074Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:228637..229074TCONS_00022270-exon-sc0000410-1575043694:228637..229074Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1491911889:229146..229551TCONS_00022270-exon-sc0000410-1491911889:229146..229551Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1510915933:229146..229551TCONS_00022270-exon-sc0000410-1510915933:229146..229551Clytia hemisphaericaexon
TCONS_00022270-exon-sc0000410-1575043694:229146..229551TCONS_00022270-exon-sc0000410-1575043694:229146..229551Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000410supercontigsc0000410:214414..229551 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.30484	2.22585	0.926892	0.936731	2.28163	7.38587e-07	2.01197	2.43196	2.84111	1.7254	1.75345	2.26534	1.61754	1.29648	1.23077	0.67834	1.36583	0.615439	0	0	1.65345	0	1.55219	2.67155	2.38343	5.91996	0	0	0.500638	1.37333
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022270 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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