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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022261 ID=TCONS_00022261|Name=TCONS_00022261|organism=Clytia hemisphaerica|type=transcript|length=1440bp
GACAAAAATGAGAGTGAAATGACATTTGAGGCGCTGTTTCACCTGAACtg
catttccggaaacaagattTATAGTTGTTAAACctgtttctaaattttac
ggtttttgttttttttttttttgtttttgttcattAGATGAACaatattt
ttctatttgatattttttgtagAATTGTTTTTTAGATATTATTGTAATTT
TTGCGAAATAATCTTGCAAATGATTTCAGAATACTCTTGAGAAAGTTCCA
GAGCCCTGCCGTCACATTTAAAGCACGTGAGGTGTCTTTTGCGCATGCGT
CTTCTAAAGACTGCAATTTCTCAAGTGTCAATTGGTCTCAAGTCTCTTAT
GCAATGTTTTACATCTGGTACGATCAAATGTTGTTTCAAATGATATCTTT
TAGTAAATAAATACCTCCGATGAAGACATTTGAGAAATGGAGATCATATT
TCTACTATAAATTACCATCGAACTAAactatcaaaatatatttcgcGATA
CTCATTGAAATGGTTGCAAGGTTATTTCTGAGCACTTTTTTGTACCTCCA
ATTTCTAGATAATTCTTTTTTCTACCTTTTGTAAGTTATTATTGTAGGAA
TGAATAAGTATTTTTGGACattatttaaagataatatAAGATATTTGAAT
ACGTGATGATTATGTCTTCAATAGACCTCTTGGCGGCAGAATTGAGTGGG
TAATGTTACGGGGAAAGATATTAGTTTACATAGGTCAGAAAGTAAATGAA
ATATTGTTGTTGATTTGAAGTTATCATTGTAGTGGGCTGTTAGCAAAGTG
CTTTTGGTTCTTCTGTTATTTTATACTGGgtcttaaaaattcaaaatcac
caAAACCCCCACGAAATCGCTTTACTTTGACCTGTTTGATCATCCTCCAG
GAGAGCATCTTTCCAACGGGTGTATTTCTCTTATACACACAGCACGAATG
GACGATGATGACATGCTTACTACACAGGAAACTCCCTATCTTACAAAAGT
GAAGAGGGAAATAGTATCTGCAAAACAAGAAACTCGATGTGATTTCTCAA
AAACCTTTCTTGTATAAACTGTACAGCATTTTTAACGTTTTATTTAAATC
GTTTGCACTGAAGATGACTGTGTCGAAAAGCTTATGCttaatattttaaa
taaaaaattttcgtGTCTAATTCTTTACTGACTTGAATGATCAACTAATG
CCTGGCAAAACTTTCGTCAACATGAAACTCGaatgttttatcaaaatttt
cgcGGTGGAACGATAGACGGATTTCCGGTTTATACACGAGTTTTTCCCGA
TGAGAAGAGGTCGAGGGAAAGTATTTTGGTTTGCATGATTCAGACTTTCG
AACGCGTCATTTCTGAACTGAATCGGTCGGATATAGTAGAGCCATATACT
CCATCTAAAGCGGATCATAAAGAAGTAAATCATTTTTTTC Run BLAST on NCBI transcript from alignment at sc0000408:216525..217964 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022261 ID=TCONS_00022261|Name=TCONS_00022261|organism=Clytia hemisphaerica|type=transcript|length=1440bp|location=Sequence derived from alignment at sc0000408:216525..217964 (Clytia hemisphaerica)
GAAAAAAATGATTTACTTCTTTATGATCCGCTTTAGATGGAGTATATGGC
TCTACTATATCCGACCGATTCAGTTCAGAAATGACGCGTTCGAAAGTCTG
AATCATGCAAACCAAAATACTTTCCCTCGACCTCTTCTCATCGGGAAAAA
CTCGTGTATAAACCGGAAATCCGTCTATCGTTCCACCgcgaaaattttga
taaaacattCGAGTTTCATGTTGACGAAAGTTTTGCCAGGCATTAGTTGA
TCATTCAAGTCAGTAAAGAATTAGACacgaaaattttttatttaaaatat
taaGCATAAGCTTTTCGACACAGTCATCTTCAGTGCAAACGATTTAAATA
AAACGTTAAAAATGCTGTACAGTTTATACAAGAAAGGTTTTTGAGAAATC
ACATCGAGTTTCTTGTTTTGCAGATACTATTTCCCTCTTCACTTTTGTAA
GATAGGGAGTTTCCTGTGTAGTAAGCATGTCATCATCGTCCATTCGTGCT
GTGTGTATAAGAGAAATACACCCGTTGGAAAGATGCTCTCCTGGAGGATG
ATCAAACAGGTCAAAGTAAAGCGATTTCGTGGGGGTTTtggtgattttga
atttttaagacCCAGTATAAAATAACAGAAGAACCAAAAGCACTTTGCTA
ACAGCCCACTACAATGATAACTTCAAATCAACAACAATATTTCATTTACT
TTCTGACCTATGTAAACTAATATCTTTCCCCGTAACATTACCCACTCAAT
TCTGCCGCCAAGAGGTCTATTGAAGACATAATCATCACGTATTCAAATAT
CTTatattatctttaaataatGTCCAAAAATACTTATTCATTCCTACAAT
AATAACTTACAAAAGGTAGAAAAAAGAATTATCTAGAAATTGGAGGTACA
AAAAAGTGCTCAGAAATAACCTTGCAACCATTTCAATGAGTATCgcgaaa
tatattttgatagtTTAGTTCGATGGTAATTTATAGTAGAAATATGATCT
CCATTTCTCAAATGTCTTCATCGGAGGTATTTATTTACTAAAAGATATCA
TTTGAAACAACATTTGATCGTACCAGATGTAAAACATTGCATAAGAGACT
TGAGACCAATTGACACTTGAGAAATTGCAGTCTTTAGAAGACGCATGCGC
AAAAGACACCTCACGTGCTTTAAATGTGACGGCAGGGCTCTGGAACTTTC
TCAAGAGTATTCTGAAATCATTTGCAAGATTATTTCGCAAAAATTACAAT
AATATCTAAAAAACAATTctacaaaaaatatcaaatagaaaaatattGTT
CATCTaatgaacaaaaacaaaaaaaaaaaaaacaaaaaccgtaaaattta
gaaacagGTTTAACAACTATAaatcttgtttccggaaatgcaGTTCAGGT
GAAACAGCGCCTCAAATGTCATTTCACTCTCATTTTTGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022261-exon-sc0000408-1491911889:216525..217964 | TCONS_00022261-exon-sc0000408-1491911889:216525..217964 | Clytia hemisphaerica | exon |
| TCONS_00022261-exon-sc0000408-1510915933:216525..217964 | TCONS_00022261-exon-sc0000408-1510915933:216525..217964 | Clytia hemisphaerica | exon |
| TCONS_00022261-exon-sc0000408-1575043694:216525..217964 | TCONS_00022261-exon-sc0000408-1575043694:216525..217964 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408 | supercontig | sc0000408:216525..217964 . |
Blast
The following BLAST results are available for this feature:
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