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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022260 ID=TCONS_00022260|Name=TCONS_00022260|organism=Clytia hemisphaerica|type=transcript|length=1029bp
aGAGAACCGACAAATTGAAGACACACCCTTATCAACTAAGATAAGTAAAA
AGAGAGAATTGTCACAGGTAGAAAAAATACTTTCAGAAGCTAATCTTTGT
CTAATGCACTAATTGAGAATAGTTTAGAATAAGTGCATGTGTCAGGTATT
ATGAATACAATAGGATAAAAGAAAGGAGATAAGAGTTCAAGGGTGTGGTC
TCACTTTCACTCACTTCAAGGTGCCATTTCATCATGACTCTTTAATGACG
GAAAGGTGCCCAATAATGaacaaagagaaagaaaaagcaTTTTCCTTATT
TCATTTCAATGAGAAATTGAAGTCTTATATCATTTATTTCATTCCACTCT
TACAAAAGAAAGGACGATACTGCTGTACCTCCATCTGTCTCATTTCTCAA
tcagtgaaaaaaaagaacaaagtttTATAGctagaattttcctttttgtt
attcACCTATCCTCTCCTTGAAGAAATAGCATCAATATTTAACGACGCGG
TAATTATCAagtatcaaaatatattttgatgaaGAAAAGAACAGAAAGTC
GATTCGATACATTGGACAAAAGAAAGGCGATAAAAGGTGTCTCTATTCTT
CTGTTTCATGAGCTATTTTTCTATTTCGTTTTTCTCCCTTAACATTATCT
GTTACTTTTTGACACATACAAGAAAGAATATCGCTTGTGATAAAAAAAAG
AGCAAATGGAAGAAAAACACGAAAGTGGTCAAGAAAAAAAgccaagtaaa
aagaaaatcttttaagctCCTTGTCCTATAATAGCTGTCAAGTCTCTCTA
TTTCGCCATTCAGGAGTGGGATGAGACAGATGTTTCAAAGCTAGTTTTCC
TTTTGAAGTTTGAGGCAATAAAATATACACTTGGCTTTCATTTCAAATAA
TAATCAAGGAAAAAGGGAGGAATGAAGATCACGGGGGTAGGGTTGTCTTA
ATGTGCAATGTTATGTACATCAGGCATCGATATCACAAAAAAACATTCCA
GAACAATTAGAACGTAAATCTGATttcca Run BLAST on NCBI transcript from alignment at sc0000408:184232..185260 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022260 ID=TCONS_00022260|Name=TCONS_00022260|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at sc0000408:184232..185260 (Clytia hemisphaerica)
tggaaATCAGATTTACGTTCTAATTGTTCTGGAATGTTTTTTTGTGATAT
CGATGCCTGATGTACATAACATTGCACATTAAGACAACCCTACCCCCGTG
ATCTTCATTCCTCCCTTTTTCCTTGATTATTATTTGAAATGAAAGCCAAG
TGTATATTTTATTGCCTCAAACTTCAAAAGGAAAACTAGCTTTGAAACAT
CTGTCTCATCCCACTCCTGAATGGCGAAATAGAGAGACTTGACAGCTATT
ATAGGACAAGGagcttaaaagattttctttttacttggcTTTTTTTCTTG
ACCACTTTCGTGTTTTTCTTCCATTTGCTCTTTTTTTTATCACAAGCGAT
ATTCTTTCTTGTATGTGTCAAAAAGTAACAGATAATGTTAAGGGAGAAAA
ACGAAATAGAAAAATAGCTCATGAAACAGAAGAATAGAGACACCTTTTAT
CGCCTTTCTTTTGTCCAATGTATCGAATCGACTTTCTGTTCTTTTCttca
tcaaaatatattttgatactTGATAATTACCGCGTCGTTAAATATTGATG
CTATTTCTTCAAGGAGAGGATAGGTgaataacaaaaaggaaaattctagC
TATAaaactttgttcttttttttcactgaTTGAGAAATGAGACAGATGGA
GGTACAGCAGTATCGTCCTTTCTTTTGTAAGAGTGGAATGAAATAAATGA
TATAAGACTTCAATTTCTCATTGAAATGAAATAAGGAAAAtgctttttct
ttctctttgttCATTATTGGGCACCTTTCCGTCATTAAAGAGTCATGATG
AAATGGCACCTTGAAGTGAGTGAAAGTGAGACCACACCCTTGAACTCTTA
TCTCCTTTCTTTTATCCTATTGTATTCATAATACCTGACACATGCACTTA
TTCTAAACTATTCTCAATTAGTGCATTAGACAAAGATTAGCTTCTGAAAG
TATTTTTTCTACCTGTGACAATTCTCTCTTTTTACTTATCTTAGTTGATA
AGGGTGTGTCTTCAATTTGTCGGTTCTCt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022260-exon-sc0000408-1491911889:184232..185260 | TCONS_00022260-exon-sc0000408-1491911889:184232..185260 | Clytia hemisphaerica | exon |
| TCONS_00022260-exon-sc0000408-1510915933:184232..185260 | TCONS_00022260-exon-sc0000408-1510915933:184232..185260 | Clytia hemisphaerica | exon |
| TCONS_00022260-exon-sc0000408-1575043694:184232..185260 | TCONS_00022260-exon-sc0000408-1575043694:184232..185260 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000408 | supercontig | sc0000408:184232..185260 . |
Blast
The following BLAST results are available for this feature:
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