TCONS_00022219 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022219
Unique NameTCONS_00022219
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3817

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022219 ID=TCONS_00022219|Name=TCONS_00022219|organism=Clytia hemisphaerica|type=transcript|length=3817bp
TGCGAATTTGcatttcgcaaaaaaaaaaacacgttttttgGACGACACAA
GACGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAAC
ACAGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAG
CAAGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAAT
CAGCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTT
GCATTCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACA
TATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCT
CCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAA
ATTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTC
AAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCA
ATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGA
GCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAG
ATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTC
CTTACACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCA
GGATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAA
GCCCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGG
CTGTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATC
ATTTCCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTA
AAGTGAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAACTTCTA
CCATCCTAACTCTCTTAAAATTCACTGTTACTTTCTAATCGATTTAATTC
TTGGGGAATGGATCGACTAATTGATTAATCGAATACTGTGTTCACACACA
CTACCATACATTGACAGTTTACATTCACGGATTTCATGGATTTACCTCAT
GACCACGACAAAAATAATACCCCACAAACACGTGTCTATGAGATGACACT
ATGTGTTTTAATTTTcgttttaaaaaacaattttaacagAATCTTTATAA
CTATACATATAATTCGTATTTTTACACAATGCAacctttatttttatatt
tttagaagtCTAGAAACCGAAACTTTTTAAGTCAAGTTTAAAGTTTCTAG
TCCCTCTACATAAATATTTGACTAGAATTTTATATTAGATTAGTTCAGTT
TAGTTTGAATACGTAGTCTGTTTAACCCTGGTTCGCTTCtctttcttgaa
aaaatgtaaCGGCTTTTCTTCTTGAGGGCGTGAtaggaagaaagaaaaaa
tggtATTAAAAACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAG
ATTTTTTcggaaagaaataaaaacattggaatattttttgatcttaTCAA
TCTGTTacatcaatattttttaacttcaataaaaaaacttaactTTGTTG
TATCTAGATAAGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGA
AAGGACGTACTGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAA
TAAATGTTTTTAACAATTAATTCATAGCCGCTAAAGACTAACtttcttga
agaaaaaaaaaaattatgtaacaTCACATGATACATCCAGGTAATTCTAG
ATTCCAGAGACCCCTTTCAAGGAGGAAACCTTCGAATTCTGGtgtgtttt
tttaaatattcttccATCTTCTTTTAAACCAGGCTCTTGTAGAAAACATG
TGTATGATTCGATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACT
TTGTAGTTTTAAATGCGCATAACGTACTGGAATACACCCTTATTTCACTC
ATTTGGAAAAcaaaactaaagtctattcacgataagtgtgcactcttttt
tcttttacctataacttttgaaggaattcttcaatctttataaatttggt
atcattggaaaNAACCATCTGCTGAAACCACAAGCGACATTGGAATCAGG
AGATTTTTTcggaaagaaataaaaacattggaatattttttgatcttaTC
AATCTGTTacatcaatattttttaacttcaaaaaaaaacttaactGCGTT
GTATCTAGATAAGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAG
AAAGGACGTACTGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACA
ATAAATGTTTTTAACAATTAATTCATAGCCGCTAAAGACTAACtttcttg
aagaaaaaaaaaaatatgcaaCATCACATGATACATCCAGGTAATTCTAG
ATTCCAGAGACCCCTTTCAAGGAGGAAACCTTCGAATTCTGgtgtttgtt
ttttaatattCTTCCATCTTCTTTTAAACGAGGCTCTTATAGAAAACATG
TGTATGATTCGATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACT
TTGTAGTTCTAAATGCGCATAACGTACTGGAATACACCCTTATTTCActc
attttgaaaacaaaactaatgCTAATCTTTCTATGACCCAATTCGGTCac
taatttttcaaagaattaaCCTTTGTAGTCTTTTGTCAGTGCATTTAGTG
ATTATTAGTTTAAATTTGTGTTGGTAGCTTAATTTCTTTTCggtttaatg
atttttttaaagaaactatAGATGATTTATTATACTTTTTAATTACCTAA
ATTaccaaattttttataaaattatcataTATATTATACgtgtaaatcaa
aaaatttattatCAAATTATTATAGTATATGGTGCTTccggaaaatttaa
atattaggattattttttttcggacacgcTGCGCAATGTGTCTGTAGAAA
ATACAGAAATAGAATTGATATTAAATATCGTTCATGTAATTCAAGCGATG
GCTCTTATATCGATgaaactaccttaagggaactaattttggcgggaact
aattttggcggatttggtgaatttagacgaaattctccaaaattagttcc
tgccaaaattaaattttttgtttccttgcctaaataacccctgaaattca
tcaaaattgctcaaaataaggcaaaatagaacagatttacgctgccattc
gccaaaattagttcccgccaaaattaaaaattttaggatatttgctgcct
gccaaaattagttcaggccaaaaaagttcccttaaggtatattcCGTTTT
TCGCAGACGCACTTTATATCAGAGAGCTAAGAGAGTGTCAAAAATTATTA
TTACTATTGTACAAAGGATAAGATTTTCAACACTTGTTGGTTTATAAATT
AtatggaatttaattttgcaaaaaaaatagatttttatgGTATAGATTTT
ATTaggaaaatattaaatttttacttcataGAGAAAGAAGAACCTATATG
GTATTCATTAAATTATTTACTGTCCCAATTTTTCTTCATTGTTTATCCAT
CTTTggacaagatcttttttcggaCAGTACCTGATAACTGTTGTGGTCAG
TGTTGTAGGAAACGAATTAAAATGTTTTCCTAACAGCTGTTATACAtttg
taatagaccttttcataaattacgtcatgaacatcacttgcctcgtattc
aaacaatttccatggtgatcatatcccttgagacattaaatgattttttt
aagaataggaagtagtt
Run BLAST on NCBI

transcript from alignment at sc0000408:179784..189119+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022219 ID=TCONS_00022219|Name=TCONS_00022219|organism=Clytia hemisphaerica|type=transcript|length=9336bp|location=Sequence derived from alignment at sc0000408:179784..189119+ (Clytia hemisphaerica)
TGCGAATTTGcatttcgcaaaaaaaaaaacacgttttttgGTGAGGATCT
AAATCTTATTAGAGGAGAAATTCCTTTTCCAATATATTTGTGCTTAGGAT
TGACTCTTTATTgtatctttttctcaaaaaaatcacaatgtTTTCTCTCG
AGTTTTATTAGTGCGGatgtttgatatttttctttctgttaaACTTTTTA
TTTACGAAGCGACGGGGAGCTTTGTTTTTCCAGCCTCGAGTTGGTGAGTT
TCGCGCTTTTCAGGGGTTTAGAATACAACAAGAAATGACCTCTTTTGTTT
CGTTTAGTACTTAagtcatgaaaaaaatttttttttcataacgaAATTTT
TATTAACGAAGATTTGATGTCATAGAAGAATCATATTAATATTTAAGAGA
GGcaagaaagaaatatttttgtatgcGCTGACCCCCGTCTCAAATCAGTG
TTCTTCTACTAACAAATCAAGCTGGCGAGAATTTCTGATCACTCACAAAA
TACCTTGCCTCTTGACAGGACGACACAAGACGAACACGAGACTAACTCCA
AAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCATCTAACCAACTC
ATAACAAATTCAACTACCACAACAGCAGCAAGAAAAATGAATGTTCCAGA
CGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGCAAGACAAAACTA
CTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAAAGACTTCTAGAT
GAAGGTGAGTTAGCTGTGATTACTCTTTTGATTCTAgtaaaaccttttga
aaaatgtCCCTGACAAAATGCCCATTGTCTAAGAAAGCTGATTAAAATCA
ATCTCTTTTTCGACAGACAACTTCCTTAAGGTTATTTAATTAATTTTGTA
GTAAGAGGTTTACCATAATGACGTAGAAATTACATCTCTCTGCATACTGC
AAGCATGTTTTTGTCAGCAGCTTGATTAAAAATGTCTGTTTTGACTTTTG
ATTTATATTagatatcaatgttttgattcaatttttcaatattcaTAACA
TTGTTTGTagtttttgtaataaaaatttgaatatttcttaGAAGAGCTAC
ATGTTATATCCTGATTTTGTTCGATTTGGGTTATTTCCTTTTACTATCAC
TTATTATTGATACACaccttttttatagaaattagTCGTGTACGAAATGA
CATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGAC
CTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCT
AAAGTAAGTAAATATTGTAGTGTTTCATTGTGCCAGTTCTAATATTGATC
AGGCCCCATTTCAAATACCCCTGTTGAAGTGGGTTGAAATTAACATATGA
AATTTCTTTCCGGCCATTATGGAACACGTGGTGAAGGAGTGAGTGCTCTT
GAGAAAATGTAAGTCACCATTGACGGCCTAAATAAAGTGATGTGAGTAAA
ATTGAGCTTTTCAAATGCTAGAAATAGTTGTTGCCCAACTCTGTTGTTTC
AGATATTGTCTGAAAATACTTTTCCCATGTAAATTGCTAAAAATTTCCCC
GGAAAAGTCGATTGTGCGCTGTAGAGGGATTAATCATCAAAATTCTATTC
ACACTGATAGTGATAACATAGCCTTTCATAATATAGCCTTTCATAATTCA
GATTACTTCTGCAAGAACTGTTAGCGGTAAAATAATGATCAGTCCGAATT
CTTAAAAGGCAGGGTTGCGTCCCCTAAGCTTTATCCAGGCTAATTTTTTG
GATATGAATGTAACATTTCTTTATTCtataaatttcatgttttattttaA
GTTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTC
AAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCA
ATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGA
GCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAG
ATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTC
CTTACACCTCCAgtaagaaaattatgtttttgaatttGGAATCATTATAT
ACCAAACAAATCTCAAGTGCTCTAAAATTCTTTGCATATAAGTTGATATG
CATTCAGCAACTTTGTTTATGTGTTTTACAGGCAGTACAGGGTATTTGAG
TAAGGGAGCTCAATTTTGTTTTCCTCATAATTTCAGAAAGACGGAGAAGA
TGCGATAAAAAAGAAGCAACTTCAGGATCTTGCAATTTTAAATGGTACTT
ACAGACACCCCAACAGTGAGGCAAGCCCTCCTGCTGCTGCCACAGTCACT
CAAAATGGTGGTAAGCAatgttttcaattattttgaagttaatatgataa
ttatgaaaaatcaaACCCCAAGCAGATCAGGCTATTTTTGTTTCCTCTTC
TGACCTGGtaagatgttttgtttttaccCAGAACTCCTTTTTATCCGGGT
GGAACATTTTGAATAAGAGGATAagtttttactttaaaattttgaaaatt
tttctttcagtatCTCCAACTGGGCTGTTAAGTTTTCCGAGTCCTTCACC
AGTCGTTCCACAAAACAATACATCATTTCCAGCCATCCGAAACTCAGCAG
GTGAGCCTGTTCATTACGACAAcatgattttccgattttgtgATTTCGGT
ATAAATCCAACAGTGCCTACACAACAACATCCATCTTCGCGATCGTTCGG
TTGTTGCTCTCCAACTGTGTTTTAAGGAATCTTTTTGTGCAATGTGTTAC
ATCAGGGTGgactttttgagtttggttttcaaatttgaaatttaattatG
TGTGGTGTATTAAACCTAAACTTCAAAGTTTGCTACTAATCACTAGaact
tttttaacattttggtaATTTGAATGGTGCATTATAAATGTCAATAAGAA
TTTATGAAGGGATAACTAATAATTTATTGCAATAACCAAAATTAACTCTA
AATTATAAAATCAGCATAACATTTTTGAGTTCTTAACAAAACTAAAGACA
TTAGTTGTATATAGTTGGACTGGACCTTATCAACTTTTGTGGAACCTCCA
ATAAAACTAAAAAGCTACTGACCATAATGTTAAACAACTTTACCAAATAA
AACTATTTGTCTGAATCTAATTTGATTTCAGCAGCTGCACTGCAAGGCTT
ATATCCTCTTGAAACTTTCGCTCAAAGAGGCACACCGGGTGCTTCGTTTC
TGGATTTTACCAATCTGGATGGCAGCTCGCTAATTTTGAGTAAAAGATGA
TAATTCATTCCAAACCGGCTGTAACAACTACtgtccaaaaatttaaaaac
tgttttgttgtgatttggtttatgtttttttattgcGATATtcgcaaaat
aaatttcaaattaaatttttgtaaatccAATTTTATTGTATGATAATTTT
ATACGTTTGAAGTTTAGTTCAAGATTAATCTTGATACTAATTTTAACTTA
TATTTAATATAAATAACACATAAACGCTATTTTTACTAACTATTTACTTT
TTTACcatttaataataataaaatactcAAATTGTGTCTTTTTTAACGAC
GTTTAAAATGATAAATTGGAAAACTTGTATTTACTATTTATTCtgcaatt
tttatattttttaaactaactttcattattttgttattttttgaaagCAA
TCTTGAGGAAACTGCATACATTTTAGGGCAAGAAGGGTTCAACACTTACa
gtacattacattacattctTTATGCAAGTTTCAGAAATCCcttgccttaa
aaaatcttgaatttttccTGTGGATagtattatttttaaaaaacagaTTT
CTCTGAATAATGTAGTAGAACTtactattttcatttcaataatattttat
ttgacGCTCAAAAGTAAAGAATTTTATAGAAATATGAAGAAGTTtatgaa
tttgataaaaaacaaaaattctaaCAACTCATGCTAAGAAAGGTCATGAC
ATTTCAACATGGAACCGACCATGAAATGCTActaataacaacaacaacag
aaatGTATTGACCCAGAATAAACCCTGCTAACATCACGACTACTTATGTC
ATCCAACCAATCAACTGAAGAGAGAATTATTACAGAAAACTGagcaattt
tattattttatatgaAGATACTTTTaggtatttatttatttagcatAGAT
TATGTgaagagaaataaagaaaaaatgaattttaaaatatttttggggta
tttgattttctaaatgtTTTGGAAATTAGGAGAGCTTTTGCAGATAAAAA
TTACAATCACTGACTTCGTGTcagtcaaatttattttttttgataatttt
tcaattcccatgggaatattaaaaataattactgttaaaaatcaaatttg
gaaATCAGATTTACGTTCTAATTGTTCTGGAATGTTTTTTTGTGATATCG
ATGCCTGATGTACATAACATTGCACATTAAGACAACCCTACCCCCGTGAT
CTTCATTCCTCCCTTTTTCCTTGATTATTATTTGAAATGAAAGCCAAGTG
TATATTTTATTGCCTCAAACTTCAAAAGGAAAACTAGCTTTGAAACATCT
GTCTCATCCCACTCCTGAATGGCGAAATAGAGAGACTTGACAGCTATTAT
AGGACAAGGagcttaaaagattttctttttacttggcTTTTTTTCTTGAC
CACTTTCGTGTTTTTCTTCCATTTGCTCTTTTTTTTATCACAAGCGATAT
TCTTTCTTGTATGTGTCAAAAAGTAACAGATAATGTTAAGGGAGAAAAAC
GAAATAGAAAAATAGCTCATGAAACAGAAGAATAGAGACACCTTTTATCG
CCTTTCTTTTGTCCAATGTATCGAATCGACTTTCTGTTCTTTTCttcatc
aaaatatattttgatactTGATAATTACCGCGTCGTTAAATATTGATGCT
ATTTCTTCAAGGAGAGGATAGGTgaataacaaaaaggaaaattctagCTA
TAaaactttgttcttttttttcactgaTTGAGAAATGAGACAGATGGAGG
TACAGCAGTATCGTCCTTTCTTTTGTAAGAGTGGAATGAAATAAATGATA
TAAGACTTCAATTTCTCATTGAAATGAAATAAGGAAAAtgctttttcttt
ctctttgttCATTATTGGGCACCTTTCCGTCATTAAAGAGTCATGATGAA
ATGGCACCTTGAAGTGAGTGAAAGTGAGACCACACCCTTGAACTCTTATC
TCCTTTCTTTTATCCTATTGTATTCATAATACCTGACACATGCACTTATT
CTAAACTATTCTCAATTAGTGCATTAGACAAAGATTAGCTTCTGAAAGTA
TTTTTTCTACCTGTGACAATTCTCTCTTTTTACTTATCTTAGTTGATAAG
GGTGTGTCTTCAATTTGTCGGTTCTCtatgttattattattgtaACATGT
CTCTGTTGTTATGTTATaacttagtttttttttcacttgaatttagtttg
tatttttttaaacgtTTCTAATTTACGTCATCAATCTTATACAgtgtgtc
caaaaaaaaaaaaacggaaaaGAATTCATATAAAGAAAAGTCATCATATT
TTATGCCGACCATTACTTGAAGCCAAATTAATGACTTTGGGAATTTGATA
ACTATTTGCTTTAAAAACATTAATTGTTCCCTGGCTAGTGAGatccgttt
tttttttcaaacacacTTACTTACTCCGTTAATGTTATTGTACAGGTCAA
CTAAAAGCACACATTGCTAAAGTGAGAAGGATGTATCATCCCTACAAACA
GGCTACAAGCTAACTTCTACCATCCTAACTCTCTTAAAATTCACTGTTAC
TTTCTAATCGGTGCGTAATCATTTATTTTCGTTTTATGTTTGTTACTGTA
TAATACACCGGTATCTAAGAAAGACATAGTTGAATATACCGACCCAATCT
TTCTTAGACACCACCATGAAGTCTCTTTATCTCCAGACATGAATGAAAGC
GACAAATTTTCTTTCCCCAAAAAAGACTCCTTATCTGTTCAAAAAACTTT
AGGCACCTTGCCTGATACATCGAGATAAAGAGGCTTTACAAATCTTACCC
ATGCCCCCAAAATAACCCTCTATATTTCTAATTGAACAGTTTTTTAATTG
ATTGACACTGTTTCCCTTTAAACTGTGAATACTGACATGGATCCCTGATG
AGTTTTAGTGTGGGGTCAATAACTCTTTAGTTATGTTTATAAGTTCACAT
AATGTTTATCTTCGCTCTAAGTCATGTTTTCTCTCCAAAGAATCCTGACT
TTCCTGCTGATGACAAAGTGATAGCTttcatgttttaattttcatccGTT
CCCCCCTAAGCCCCATTAATTTCCTCTCCACTCTATGATTTACTTTATTT
GCTTACAAACTaatcattttttgttgtttttaatattttccttttccatt
ATAATAACAGATTTAATTCTTGGGGAATGGATCGACTAATTGATTAATCG
AATACTGTGTTCACACACACTACCATACATTGACAGTTTACATTCACGGA
TTTCATGGATTTACCTCATGACCACGACAAAAATAATACCCCACAAACAC
GTGTCTATGAGATGACACTATGTGTTTTAATTTTcgttttaaaaaacaat
tttaacagAATCTTTATAACTATACATATAATTCGTATTTTTACACAATG
CAacctttatttttatatttttagaagtCTAGAAACCGAAACTTTTTAAG
TCAAGTTTAAAGTTTCTAGTCCCTCTACATAAATATTTGACTAGAATTTT
ATATTAGATTAGTTCAGTTTAGTTTGAATACGTAGTCTGTTTAACCCTGG
TTCGCTTCtctttcttgaaaaaatgtaaCGGCTTTTCTTCTTGAGGGCGT
GAtaggaagaaagaaaaaatggtATTAAAAACCATCTGCTGAAACCACAA
GCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaacattggaa
tattttttgatcttaTCAATCTGTTacatcaatattttttaacttcaata
aaaaaacttaactTTGTTGTATCTAGATAAGATTTAAAACGAAATTTTTC
TTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAGAAAAG
CGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATAGCCGC
TAAAGACTAACtttcttgaagaaaaaaaaaaattatgtaacaTCACATGA
TACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAAACCT
TCGAATTCTGGtgtgtttttttaaatattcttccATCTTCTTTTAAACCA
GGCTCTTGTAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGTTCGC
TAGTTTTGGATTTATGACTTTGTAGTTTTAAATGCGCATAACGTACTGGA
ATACACCCTTATTTCACTCATTTGGAAAAcaaaactaaagtctattcacg
ataagtgtgcactcttttttcttttacctataacttttgaaggaattctt
caatctttataaatttggtatcattggaaaNAACCATCTGCTGAAACCAC
AAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaacattgg
aatattttttgatcttaTCAATCTGTTacatcaatattttttaacttcaa
aaaaaaacttaactGCGTTGTATCTAGATAAGATTTAAAACGAAATTTTT
CTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAGAAAA
GCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATAGCCG
CTAAAGACTAACtttcttgaagaaaaaaaaaaatatgcaaCATCACATGA
TACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAAACCT
TCGAATTCTGgtgtttgttttttaatattCTTCCATCTTCTTTTAAACGA
GGCTCTTATAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGTTCGC
TAGTTTTGGATTTATGACTTTGTAGTTCTAAATGCGCATAACGTACTGGA
ATACACCCTTATTTCActcattttgaaaacaaaactaatgCTAATCTTTC
TATGACCCAATTCGGTCactaatttttcaaagaattaaCCTTTGTAGTCT
TTTGTCAGTGCATTTAGTGATTATTAGTTTAAATTTGTGTTGGTAGCTTA
ATTTCTTTTCggtttaatgatttttttaaagaaactatAGATGATTTATT
ATACTTTTTAATTACCTAAATTaccaaattttttataaaattatcataTA
TATTATACgtgtaaatcaaaaaatttattatCAAATTATTATAGTATATG
GTGCTTccggaaaatttaaatattaggattattttttttcggacacgcTG
CGCAATGTGTCTGTAGAAAATACAGAAATAGAATTGATATTAAATATCGT
TCATGTAATTCAAGCGATGGCTCTTATATCGATgaaactaccttaaggga
actaattttggcgggaactaattttggcggatttggtgaatttagacgaa
attctccaaaattagttcctgccaaaattaaattttttgtttccttgcct
aaataacccctgaaattcatcaaaattgctcaaaataaggcaaaatagaa
cagatttacgctgccattcgccaaaattagttcccgccaaaattaaaaat
tttaggatatttgctgcctgccaaaattagttcaggccaaaaaagttccc
ttaaggtatattcCGTTTTTCGCAGACGCACTTTATATCAGAGAGCTAAG
AGAGTGTCAAAAATTATTATTACTATTGTACAAAGGATAAGATTTTCAAC
ACTTGTTGGTTTATAAATTAtatggaatttaattttgcaaaaaaaataga
tttttatgGTATAGATTTTATTaggaaaatattaaatttttacttcataG
AGAAAGAAGAACCTATATGGTATTCATTAAATTATTTACTGTCCCAATTT
TTCTTCATTGTTTATCCATCTTTggacaagatcttttttcggaCAGTACC
TGATAACTGTTGTGGTCAGTGTTGTAGGAAACGAATTAAAATGTTTTCCT
AACAGCTGTTATACAtttgtaatagaccttttcataaattacgtcatgaa
catcacttgcctcgtattcaaacaatttccatggtgatcatatcccttga
gacattaaatgatttttttaagaataggaagtagtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012455XLOC_012455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022219-exon-sc0000408-1491911889:179784..179823TCONS_00022219-exon-sc0000408-1491911889:179784..179823Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:179784..179823TCONS_00022219-exon-sc0000408-1510915933:179784..179823Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:179784..179823TCONS_00022219-exon-sc0000408-1575043694:179784..179823Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:180302..180537TCONS_00022219-exon-sc0000408-1491911889:180302..180537Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:180302..180537TCONS_00022219-exon-sc0000408-1510915933:180302..180537Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:180302..180537TCONS_00022219-exon-sc0000408-1575043694:180302..180537Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:180962..181086TCONS_00022219-exon-sc0000408-1491911889:180962..181086Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:180962..181086TCONS_00022219-exon-sc0000408-1510915933:180962..181086Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:180962..181086TCONS_00022219-exon-sc0000408-1575043694:180962..181086Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:181635..181895TCONS_00022219-exon-sc0000408-1491911889:181635..181895Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:181635..181895TCONS_00022219-exon-sc0000408-1510915933:181635..181895Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:181635..181895TCONS_00022219-exon-sc0000408-1575043694:181635..181895Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:182070..182193TCONS_00022219-exon-sc0000408-1491911889:182070..182193Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:182070..182193TCONS_00022219-exon-sc0000408-1510915933:182070..182193Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:182070..182193TCONS_00022219-exon-sc0000408-1575043694:182070..182193Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:182394..182483TCONS_00022219-exon-sc0000408-1491911889:182394..182483Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:182394..182483TCONS_00022219-exon-sc0000408-1510915933:182394..182483Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:182394..182483TCONS_00022219-exon-sc0000408-1575043694:182394..182483Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:185579..185693TCONS_00022219-exon-sc0000408-1491911889:185579..185693Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:185579..185693TCONS_00022219-exon-sc0000408-1510915933:185579..185693Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:185579..185693TCONS_00022219-exon-sc0000408-1575043694:185579..185693Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1491911889:186294..189119TCONS_00022219-exon-sc0000408-1491911889:186294..189119Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1510915933:186294..189119TCONS_00022219-exon-sc0000408-1510915933:186294..189119Clytia hemisphaericaexon
TCONS_00022219-exon-sc0000408-1575043694:186294..189119TCONS_00022219-exon-sc0000408-1575043694:186294..189119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:179784..189119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	5.02655e-08	0.5979	0	0	2.11179e-07	0.521867	3.0702	0.832078	3.97335	2.07283	5.60979e-07	1.54764e-07	0.00402833	6.08578e-06	1.33981	5.13399e-09	0.000191738	0	1.10548e-08	0	0.000106178	7.64032e-09	0.268623	0	0.00947735	1.82624e-05	1.56223e-06	7.44272e-07
Blast
[Close]
BLAST of TCONS_00022219 vs. Swiss-Prot (Human)
Match: QKI (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.032e-64
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 3 
Query:  189 EYLNQLLQDKTTVSKMPK---IFLHSERLLDEEISRVRNDIF------CPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTLRQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDTEDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPN 740
            +YL QL+ DK  +S +P    IF H ERLLDEEISRVR D++              LP   GP V+L EK+Y  VK++P FNFVGRI+GPRGLT +Q+E ETG K++VRG+GSM+DKK EE+ RG+PN+EHL+EDLHVLI VED ++RA +KLK+AVEEV  LL P  +GED++KK QL +LAILNGTYR  N
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDAN 208
The following BLAST results are available for this feature:
BLAST of TCONS_00022219 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QKI4.032e-6458.55Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
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