TCONS_00022214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022214
Unique NameTCONS_00022214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4007

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022214 ID=TCONS_00022214|Name=TCONS_00022214|organism=Clytia hemisphaerica|type=transcript|length=4007bp
taaaaacataaaagatATCAAAACTTGCAATCCAAAATGGCACTGATGGA
CCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACTGGAA
CAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTACTGCA
TCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACAATAC
GGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGACGAACACG
AGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCA
TCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAAT
GAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGC
AAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAA
AGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATTTTGCCC
GTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTGTGAAGT
TAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTCAACTTT
GTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGTTGAGCA
AGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAAGACA
AGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCATTTGGAT
GAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCGTGCTcg
aatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTACACCTC
CAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCA
ATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGC
TGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGTTAAGTT
TTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCCAGCC
ATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAAGTGAGAAG
GATGTATCATCCCTACAAACAGGCTACAAGCTAACTTCTACCATCCTAAC
TCTCTTAAAATTCACTGTTACTTTCTAATCGATTTAATTCTTGGGGAATG
GATCGACTAATTGATTAATCGAATACTGTGTTCACACACACTACCATACA
TTGACAGTTTACATTCACGGATTTCATGGATTTACCTCATGACCACGACA
AAAATAATACCCCACAAACACGTGTCTATGAGATGACACTATGTGTTTTA
ATTTTcgttttaaaaaacaattttaacagAATCTTTATAACTATACATAT
AATTCGTATTTTTACACAATGCAacctttatttttatatttttagaagtC
TAGAAACCGAAACTTTTTAAGTCAAGTTTAAAGTTTCTAGTCCCTCTACA
TAAATATTTGACTAGAATTTTATATTAGATTAGTTCAGTTTAGTTTGAAT
ACGTAGTCTGTTTAACCCTGGTTCGCTTCtctttcttgaaaaaatgtaaC
GGCTTTTCTTCTTGAGGGCGTGAtaggaagaaagaaaaaatggtATTAAA
AACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTcgg
aaagaaataaaaacattggaatattttttgatcttaTCAATCTGTTacat
caatattttttaacttcaataaaaaaacttaactTTGTTGTATCTAGATA
AGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTAC
TGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTTT
TAACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaaa
aaattatgtaacaTCACATGATACATCCAGGTAATTCTAGATTCCAGAGA
CCCCTTTCAAGGAGGAAACCTTCGAATTCTGGtgtgtttttttaaatatt
cttccATCTTCTTTTAAACCAGGCTCTTGTAGAAAACATGTGTATGATTC
GATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTTT
AAATGCGCATAACGTACTGGAATACACCCTTATTTCACTCATTTGGAAAA
caaaactaaagtctattcacgataagtgtgcactcttttttcttttacct
ataacttttgaaggaattcttcaatctttataaatttggtatcattggaa
aNAACCATCTGCTGAAACCACAAGCGACATTGGAATCAGGAGATTTTTTc
ggaaagaaataaaaacattggaatattttttgatcttaTCAATCTGTTac
atcaatattttttaacttcaaaaaaaaacttaactGCGTTGTATCTAGAT
AAGATTTAAAACGAAATTTTTCTTGGCTTTTACGAACAAGAAAGGACGTA
CTGATTTTCGTTAAAAGAAAAGCGAAAAATTCTACTAACAATAAATGTTT
TTAACAATTAATTCATAGCCGCTAAAGACTAACtttcttgaagaaaaaaa
aaaatatgcaaCATCACATGATACATCCAGGTAATTCTAGATTCCAGAGA
CCCCTTTCAAGGAGGAAACCTTCGAATTCTGgtgtttgttttttaatatt
CTTCCATCTTCTTTTAAACGAGGCTCTTATAGAAAACATGTGTATGATTC
GATCTCGAATGTTGAGTTCGCTAGTTTTGGATTTATGACTTTGTAGTTCT
AAATGCGCATAACGTACTGGAATACACCCTTATTTCActcattttgaaaa
caaaactaatgCTAATCTTTCTATGACCCAATTCGGTCactaatttttca
aagaattaaCCTTTGTAGTCTTTTGTCAGTGCATTTAGTGATTATTAGTT
TAAATTTGTGTTGGTAGCTTAATTTCTTTTCggtttaatgatttttttaa
agaaactatAGATGATTTATTATACTTTTTAATTACCTAAATTaccaaat
tttttataaaattatcataTATATTATACgtgtaaatcaaaaaatttatt
atCAAATTATTATAGTATATGGTGCTTccggaaaatttaaatattaggat
tattttttttcggacacgcTGCGCAATGTGTCTGTAGAAAATACAGAAAT
AGAATTGATATTAAATATCGTTCATGTAATTCAAGCGATGGCTCTTATAT
CGATgaaactaccttaagggaactaattttggcgggaactaattttggcg
gatttggtgaatttagacgaaattctccaaaattagttcctgccaaaatt
aaattttttgtttccttgcctaaataacccctgaaattcatcaaaattgc
tcaaaataaggcaaaatagaacagatttacgctgccattcgccaaaatta
gttcccgccaaaattaaaaattttaggatatttgctgcctgccaaaatta
gttcaggccaaaaaagttcccttaaggtatattcCGTTTTTCGCAGACGC
ACTTTATATCAGAGAGCTAAGAGAGTGTCAAAAATTATTATTACTATTGT
ACAAAGGATAAGATTTTCAACACTTGTTGGTTTATAAATTAtatggaatt
taattttgcaaaaaaaatagatttttatgGTATAGATTTTATTaggaaaa
tattaaatttttacttcataGAGAAAGAAGAACCTATATGGTATTCATTA
AATTATTTACTGTCCCAATTTTTCTTCATTGTTTATCCATCTTTggacaa
gatcttttttcggaCAGTACCTGATAACTGTTGTGGTCAGTGTTGTAGGA
AACGAATTAAAATGTTTTCCTAACAGCTGTTATACAtttgtaatagacct
tttcataaattacgtcatgaacatcacttgcctcgtattcaaacaatttc
catggtgatcatatcccttgagacattaaatgatttttttaagaatagga
agtagtt
Run BLAST on NCBI

protein sequence of TCONS_00022214-protein

>TCONS_00022214-protein ID=TCONS_00022214-protein|Name=TCONS_00022214-protein|organism=Clytia hemisphaerica|type=polypeptide|length=365bp
MALMDPNILSVLNGLLYQETGTTITPSNGLHPALDTTASFQPTNDDLNTW
LCNNTEALKGQSNAWTTQDEHETNSKKARLYNSTTQNSSNQLITNSTTTT
AARKMNVPDELTATEYLNQLLQDKTTVSKMPKIFLHSERLLDEEISRVRN
DIFCPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTL
RQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDT
EDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPNSE
ASPPAAATVTQNGVSPTGLLSFPSPSPVVPQNNTSFPAIRNSAGQLKAHI
AKVRRMYHPYKQATS
Run BLAST on NCBI

transcript from alignment at sc0000408:176230..189119+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022214 ID=TCONS_00022214|Name=TCONS_00022214|organism=Clytia hemisphaerica|type=transcript|length=12890bp|location=Sequence derived from alignment at sc0000408:176230..189119+ (Clytia hemisphaerica)
taaaaacataaaagatATCAAAACTTGCAATCCAAAATGGCACTGATGGA
CCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACTGGAA
CAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTACTGCA
TCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACAATAC
GGAGGCTTTGAAAGGCCAATCAAATGCGTGGTGAGTTAATTTAGTTCGAG
ATTTGTTTCCACTTTTAATAGTTTTCTAAAGCCCCTCTGATAACAAACTC
GAAGCCAGGCCCTTAGTTCGTTAACGCTCATGATAGTACCACGTccatca
acaaaataaaaaacaactggCTACGAAATTGCTCAACGTTCCACTGCGTG
TCAATTTTCTCATCGAATTTGTTATTCTAGGCTCAAGGTTTAGAGGCATC
CATATCCGATATTCTTCAACCCTGAGTAATACCCCCGCAAACCCAAGGTT
ATTTGTAATTTCATCATCAAATCTTTAAATTCAAAGGGCCATTAACTAAT
ATCAGGGGGGGTGTTAATATttcaacacccctgtctcacagccccggtgg
aacatCTTCCCACAGTAGATGacaatttctatcgaaatcccaatgggaat
tATAATTCTATGTTCCCAGGTCAAGTCCAGAGGGGATAGTTATGGAGTAC
AATCTCTTTTGATGCTTTTTCCATAGTTATTTTTAAATGGGCGTAGTGGT
GTAGTGGTTACCGTGcttgacttctgtccaggaggctCGAGTTTGATACC
CACTgtggcactacgattcacttggcaagtgaatgctccttcgcccgggt
caacccatgccatgcgaggggaattgggtaccataactctgatacaagag
tatgggtagatattccagacattgtggtgtgccgAGACACTtaggaggtt
ctacacctgcgaggacatccGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNctcgcatctgcagggttgcaat
gtctgcttgcgctgtgattcctactccaccgtgggtaggacccattccga
tgcatcggagggcatatctatctatttatctatttttaaatgGGGGTAAG
AACACTGTCAATTTTCCAGTgcggctgaaattgtagggtatttttctcaC
CGGTGacgaaatttcagcaaaattttcCAGTGTGTAGTAGGAGTCCAGCT
GGGTGTGTAGCACATGGGTGTATTTCAAATGAAAGCTTCTTCGTTAGCTG
ATAGATTTTCCTTGATCGTCGGAGTAGGACTCCTCTACTACAAACATAAT
AGCCAGTCCACCTAAATAGTGTGAGATAAAGAAATTTAATTAGCcactga
gtttgaaattttgcatggTTCAAACTCTTCCCTTAGAGCATAGTCATTAT
ACAGGGTGttcctaattaaagtatcgagtcgaaacacagctatgagtaga
aagttttatgtgcgtgttcacaaaattgtattttaagctctccctttttt
ttctttgccattacgattaatttatacgttgtaactaccttttgtaataa
gcctgtgtgatggagaacgttcttatattttagcgataacacacacaaac
ttttctactcaatcgcatgttcaaactcgatactttaattagagACACCC
TGTATAAAACTCTGGTCtagcaatgtattgttttaacttttttgtcaaat
tttcctttgttatgaataaaaggcaagttgcgatttgcatactttttaaT
CACGTTTCCAAATACtactcttgggattggtctaatttctaatcacatga
tcaaaaatcTATGCAAAACAAGACGATTTGCGAACGCAAGCTCTAACtgt
taacaaaagaattaaacaaAAGCTTTCCAGTCTGGAAATTCCAGACCGGG
GATTTTTATATTGACTATGCTTAGAGTAAGTCGGAAAAGCTGGTTATCTC
ATTCCATTTTCGATAGCATAGCAGCTACAATATCATTAtcgtaatatttg
aaaaaaaaggaaattatcTAGAAATGTTAgtcacaaacaatttggaagtc
aaacatggtccaataaggctcagaatatagcctggaagttgATAAACCca
tcccgaattgaaatattcgattacagTAAATTGAACAGATAGAGATAGTC
CAAAAGTgactttttcgcccgaacttcTAATTTCAAAAAACGAGGGAATG
ACCAAAATTCTCGCAGATTATGGTGGGTTTTCCTTTAAAGCAGTAATCTT
GATTATTTCTCTAAAGGGCGTAACGAGCTAGCAAGACAAGTTCCAGAGTC
AACTGTTTGGCTCTTAGTCTTACTACGGGCCTACTACATGCTTTGGTTTT
TTCTATTCTTGGTAAACCTTCGGCTTATGATAAGATTGACCCTGCTATGA
CAAGAATGGCCCTGCTAGATTGACCATTCATGCATCTTCGATTGATCAGT
GTTTGCATTGATGTCAAGCGAGGTCATTCATTGTGTATGTGAAGTTAAAT
TGAATGCGAAACTCgcagaaaaatattgcactactttctttcttttgaca
GTTTGACTGTGCTATAAAAGATGACTATTGTATTGCTGTAATACAAAACT
TATAGAGGTGTTATTTATATCcggaaaaagttaaatatttaaGAGATGAT
TGTAATCTTTTGACCGTTTTTAGGACTGATAGGTTTACTTTTCCCACTTA
ATTGAAAAAGTGGAGAAAATCAATATTTAGAAGGAACTAGCAATCTACTG
CTTTACTACTATAATAGACCATCGTATTTTACCGACTAAATTTTTGATAA
CAAATACAATCAAGCAAGATTCAAGAAGAAGTCCTCTATTTGCTTGGTAT
TGATATTACAGGGGAATctgtattcaatttttcacgtACGGTGGTGGCTT
TCCTATCATAGCgagcttacacgttttttttattagaatctagtttaaga
acattttaggcagataatcgctaaaaaataagcacatccaggctcagtca
aattttaggtgttctaatgaaaaaaaacgtgtattacacCTGCGCTATCC
AGTCTTCAGTTAATAGCTTCACAACAATTTAACTGCAAGTTAAACAGTTC
AAAAAGTAAGTaatcttgaaaattaaaattaaattttagcgACAGAACAT
GCTTTTTCTGTTTTCGGGACCATTCATGGGTACGGTACTCGACAGCACTG
ATGATATCGTCATCTCAACCTATCTCAACCGTGGAATTTAGGTACTAGCA
TATAATAAAAGGGTGTTAGCAGGTACATACAGAATCACCAGGGAGGCGTG
TCACTTACAATCACTCACTTCACGCAAGACAGCTCGCTTCCACGCGCGTG
TATAATAAAGACCAGAAAAAGTAAGCGACCGCAAAATCATGTTGTGTTAC
GACTTGCGAATTTGcatttcgcaaaaaaaaaaacacgttttttgGTGAGG
ATCTAAATCTTATTAGAGGAGAAATTCCTTTTCCAATATATTTGTGCTTA
GGATTGACTCTTTATTgtatctttttctcaaaaaaatcacaatgtTTTCT
CTCGAGTTTTATTAGTGCGGatgtttgatatttttctttctgttaaACTT
TTTATTTACGAAGCGACGGGGAGCTTTGTTTTTCCAGCCTCGAGTTGGTG
AGTTTCGCGCTTTTCAGGGGTTTAGAATACAACAAGAAATGACCTCTTTT
GTTTCGTTTAGTACTTAagtcatgaaaaaaatttttttttcataacgaAA
TTTTTATTAACGAAGATTTGATGTCATAGAAGAATCATATTAATATTTAA
GAGAGGcaagaaagaaatatttttgtatgcGCTGACCCCCGTCTCAAATC
AGTGTTCTTCTACTAACAAATCAAGCTGGCGAGAATTTCTGATCACTCAC
AAAATACCTTGCCTCTTGACAGGACGACACAAGACGAACACGAGACTAAC
TCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATTCATCTAACCA
ACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAAATGAATGTTC
CAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATTGCAAGACAAA
ACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTGAAAGACTTCT
AGATGAAGGTGAGTTAGCTGTGATTACTCTTTTGATTCTAgtaaaacctt
ttgaaaaatgtCCCTGACAAAATGCCCATTGTCTAAGAAAGCTGATTAAA
ATCAATCTCTTTTTCGACAGACAACTTCCTTAAGGTTATTTAATTAATTT
TGTAGTAAGAGGTTTACCATAATGACGTAGAAATTACATCTCTCTGCATA
CTGCAAGCATGTTTTTGTCAGCAGCTTGATTAAAAATGTCTGTTTTGACT
TTTGATTTATATTagatatcaatgttttgattcaatttttcaatattcaT
AACATTGTTTGTagtttttgtaataaaaatttgaatatttcttaGAAGAG
CTACATGTTATATCCTGATTTTGTTCGATTTGGGTTATTTCCTTTTACTA
TCACTTATTATTGATACACaccttttttatagaaattagTCGTGTACGAA
ATGACATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCT
GGACCTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCA
CCCTAAAGTAAGTAAATATTGTAGTGTTTCATTGTGCCAGTTCTAATATT
GATCAGGCCCCATTTCAAATACCCCTGTTGAAGTGGGTTGAAATTAACAT
ATGAAATTTCTTTCCGGCCATTATGGAACACGTGGTGAAGGAGTGAGTGC
TCTTGAGAAAATGTAAGTCACCATTGACGGCCTAAATAAAGTGATGTGAG
TAAAATTGAGCTTTTCAAATGCTAGAAATAGTTGTTGCCCAACTCTGTTG
TTTCAGATATTGTCTGAAAATACTTTTCCCATGTAAATTGCTAAAAATTT
CCCCGGAAAAGTCGATTGTGCGCTGTAGAGGGATTAATCATCAAAATTCT
ATTCACACTGATAGTGATAACATAGCCTTTCATAATATAGCCTTTCATAA
TTCAGATTACTTCTGCAAGAACTGTTAGCGGTAAAATAATGATCAGTCCG
AATTCTTAAAAGGCAGGGTTGCGTCCCCTAAGCTTTATCCAGGCTAATTT
TTTGGATATGAATGTAACATTTCTTTATTCtataaatttcatgttttatt
ttaAGTTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTA
CGTCAAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGG
TTCAATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACT
ATGAGCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACT
GAAGATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTT
CCTCCTTACACCTCCAgtaagaaaattatgtttttgaatttGGAATCATT
ATATACCAAACAAATCTCAAGTGCTCTAAAATTCTTTGCATATAAGTTGA
TATGCATTCAGCAACTTTGTTTATGTGTTTTACAGGCAGTACAGGGTATT
TGAGTAAGGGAGCTCAATTTTGTTTTCCTCATAATTTCAGAAAGACGGAG
AAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTGCAATTTTAAATGGT
ACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCTGCTGCTGCCACAGT
CACTCAAAATGGTGGTAAGCAatgttttcaattattttgaagttaatatg
ataattatgaaaaatcaaACCCCAAGCAGATCAGGCTATTTTTGTTTCCT
CTTCTGACCTGGtaagatgttttgtttttaccCAGAACTCCTTTTTATCC
GGGTGGAACATTTTGAATAAGAGGATAagtttttactttaaaattttgaa
aatttttctttcagtatCTCCAACTGGGCTGTTAAGTTTTCCGAGTCCTT
CACCAGTCGTTCCACAAAACAATACATCATTTCCAGCCATCCGAAACTCA
GCAGGTGAGCCTGTTCATTACGACAAcatgattttccgattttgtgATTT
CGGTATAAATCCAACAGTGCCTACACAACAACATCCATCTTCGCGATCGT
TCGGTTGTTGCTCTCCAACTGTGTTTTAAGGAATCTTTTTGTGCAATGTG
TTACATCAGGGTGgactttttgagtttggttttcaaatttgaaatttaat
tatGTGTGGTGTATTAAACCTAAACTTCAAAGTTTGCTACTAATCACTAG
aacttttttaacattttggtaATTTGAATGGTGCATTATAAATGTCAATA
AGAATTTATGAAGGGATAACTAATAATTTATTGCAATAACCAAAATTAAC
TCTAAATTATAAAATCAGCATAACATTTTTGAGTTCTTAACAAAACTAAA
GACATTAGTTGTATATAGTTGGACTGGACCTTATCAACTTTTGTGGAACC
TCCAATAAAACTAAAAAGCTACTGACCATAATGTTAAACAACTTTACCAA
ATAAAACTATTTGTCTGAATCTAATTTGATTTCAGCAGCTGCACTGCAAG
GCTTATATCCTCTTGAAACTTTCGCTCAAAGAGGCACACCGGGTGCTTCG
TTTCTGGATTTTACCAATCTGGATGGCAGCTCGCTAATTTTGAGTAAAAG
ATGATAATTCATTCCAAACCGGCTGTAACAACTACtgtccaaaaatttaa
aaactgttttgttgtgatttggtttatgtttttttattgcGATATtcgca
aaataaatttcaaattaaatttttgtaaatccAATTTTATTGTATGATAA
TTTTATACGTTTGAAGTTTAGTTCAAGATTAATCTTGATACTAATTTTAA
CTTATATTTAATATAAATAACACATAAACGCTATTTTTACTAACTATTTA
CTTTTTTACcatttaataataataaaatactcAAATTGTGTCTTTTTTAA
CGACGTTTAAAATGATAAATTGGAAAACTTGTATTTACTATTTATTCtgc
aatttttatattttttaaactaactttcattattttgttattttttgaaa
gCAATCTTGAGGAAACTGCATACATTTTAGGGCAAGAAGGGTTCAACACT
TACagtacattacattacattctTTATGCAAGTTTCAGAAATCCcttgcc
ttaaaaaatcttgaatttttccTGTGGATagtattatttttaaaaaacag
aTTTCTCTGAATAATGTAGTAGAACTtactattttcatttcaataatatt
ttatttgacGCTCAAAAGTAAAGAATTTTATAGAAATATGAAGAAGTTta
tgaatttgataaaaaacaaaaattctaaCAACTCATGCTAAGAAAGGTCA
TGACATTTCAACATGGAACCGACCATGAAATGCTActaataacaacaaca
acagaaatGTATTGACCCAGAATAAACCCTGCTAACATCACGACTACTTA
TGTCATCCAACCAATCAACTGAAGAGAGAATTATTACAGAAAACTGagca
attttattattttatatgaAGATACTTTTaggtatttatttatttagcat
AGATTATGTgaagagaaataaagaaaaaatgaattttaaaatatttttgg
ggtatttgattttctaaatgtTTTGGAAATTAGGAGAGCTTTTGCAGATA
AAAATTACAATCACTGACTTCGTGTcagtcaaatttattttttttgataa
tttttcaattcccatgggaatattaaaaataattactgttaaaaatcaaa
tttggaaATCAGATTTACGTTCTAATTGTTCTGGAATGTTTTTTTGTGAT
ATCGATGCCTGATGTACATAACATTGCACATTAAGACAACCCTACCCCCG
TGATCTTCATTCCTCCCTTTTTCCTTGATTATTATTTGAAATGAAAGCCA
AGTGTATATTTTATTGCCTCAAACTTCAAAAGGAAAACTAGCTTTGAAAC
ATCTGTCTCATCCCACTCCTGAATGGCGAAATAGAGAGACTTGACAGCTA
TTATAGGACAAGGagcttaaaagattttctttttacttggcTTTTTTTCT
TGACCACTTTCGTGTTTTTCTTCCATTTGCTCTTTTTTTTATCACAAGCG
ATATTCTTTCTTGTATGTGTCAAAAAGTAACAGATAATGTTAAGGGAGAA
AAACGAAATAGAAAAATAGCTCATGAAACAGAAGAATAGAGACACCTTTT
ATCGCCTTTCTTTTGTCCAATGTATCGAATCGACTTTCTGTTCTTTTCtt
catcaaaatatattttgatactTGATAATTACCGCGTCGTTAAATATTGA
TGCTATTTCTTCAAGGAGAGGATAGGTgaataacaaaaaggaaaattcta
gCTATAaaactttgttcttttttttcactgaTTGAGAAATGAGACAGATG
GAGGTACAGCAGTATCGTCCTTTCTTTTGTAAGAGTGGAATGAAATAAAT
GATATAAGACTTCAATTTCTCATTGAAATGAAATAAGGAAAAtgcttttt
ctttctctttgttCATTATTGGGCACCTTTCCGTCATTAAAGAGTCATGA
TGAAATGGCACCTTGAAGTGAGTGAAAGTGAGACCACACCCTTGAACTCT
TATCTCCTTTCTTTTATCCTATTGTATTCATAATACCTGACACATGCACT
TATTCTAAACTATTCTCAATTAGTGCATTAGACAAAGATTAGCTTCTGAA
AGTATTTTTTCTACCTGTGACAATTCTCTCTTTTTACTTATCTTAGTTGA
TAAGGGTGTGTCTTCAATTTGTCGGTTCTCtatgttattattattgtaAC
ATGTCTCTGTTGTTATGTTATaacttagtttttttttcacttgaatttag
tttgtatttttttaaacgtTTCTAATTTACGTCATCAATCTTATACAgtg
tgtccaaaaaaaaaaaaacggaaaaGAATTCATATAAAGAAAAGTCATCA
TATTTTATGCCGACCATTACTTGAAGCCAAATTAATGACTTTGGGAATTT
GATAACTATTTGCTTTAAAAACATTAATTGTTCCCTGGCTAGTGAGatcc
gttttttttttcaaacacacTTACTTACTCCGTTAATGTTATTGTACAGG
TCAACTAAAAGCACACATTGCTAAAGTGAGAAGGATGTATCATCCCTACA
AACAGGCTACAAGCTAACTTCTACCATCCTAACTCTCTTAAAATTCACTG
TTACTTTCTAATCGGTGCGTAATCATTTATTTTCGTTTTATGTTTGTTAC
TGTATAATACACCGGTATCTAAGAAAGACATAGTTGAATATACCGACCCA
ATCTTTCTTAGACACCACCATGAAGTCTCTTTATCTCCAGACATGAATGA
AAGCGACAAATTTTCTTTCCCCAAAAAAGACTCCTTATCTGTTCAAAAAA
CTTTAGGCACCTTGCCTGATACATCGAGATAAAGAGGCTTTACAAATCTT
ACCCATGCCCCCAAAATAACCCTCTATATTTCTAATTGAACAGTTTTTTA
ATTGATTGACACTGTTTCCCTTTAAACTGTGAATACTGACATGGATCCCT
GATGAGTTTTAGTGTGGGGTCAATAACTCTTTAGTTATGTTTATAAGTTC
ACATAATGTTTATCTTCGCTCTAAGTCATGTTTTCTCTCCAAAGAATCCT
GACTTTCCTGCTGATGACAAAGTGATAGCTttcatgttttaattttcatc
cGTTCCCCCCTAAGCCCCATTAATTTCCTCTCCACTCTATGATTTACTTT
ATTTGCTTACAAACTaatcattttttgttgtttttaatattttccttttc
cattATAATAACAGATTTAATTCTTGGGGAATGGATCGACTAATTGATTA
ATCGAATACTGTGTTCACACACACTACCATACATTGACAGTTTACATTCA
CGGATTTCATGGATTTACCTCATGACCACGACAAAAATAATACCCCACAA
ACACGTGTCTATGAGATGACACTATGTGTTTTAATTTTcgttttaaaaaa
caattttaacagAATCTTTATAACTATACATATAATTCGTATTTTTACAC
AATGCAacctttatttttatatttttagaagtCTAGAAACCGAAACTTTT
TAAGTCAAGTTTAAAGTTTCTAGTCCCTCTACATAAATATTTGACTAGAA
TTTTATATTAGATTAGTTCAGTTTAGTTTGAATACGTAGTCTGTTTAACC
CTGGTTCGCTTCtctttcttgaaaaaatgtaaCGGCTTTTCTTCTTGAGG
GCGTGAtaggaagaaagaaaaaatggtATTAAAAACCATCTGCTGAAACC
ACAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaacatt
ggaatattttttgatcttaTCAATCTGTTacatcaatattttttaacttc
aataaaaaaacttaactTTGTTGTATCTAGATAAGATTTAAAACGAAATT
TTTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAGA
AAAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATAG
CCGCTAAAGACTAACtttcttgaagaaaaaaaaaaattatgtaacaTCAC
ATGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAA
ACCTTCGAATTCTGGtgtgtttttttaaatattcttccATCTTCTTTTAA
ACCAGGCTCTTGTAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGT
TCGCTAGTTTTGGATTTATGACTTTGTAGTTTTAAATGCGCATAACGTAC
TGGAATACACCCTTATTTCACTCATTTGGAAAAcaaaactaaagtctatt
cacgataagtgtgcactcttttttcttttacctataacttttgaaggaat
tcttcaatctttataaatttggtatcattggaaaNAACCATCTGCTGAAA
CCACAAGCGACATTGGAATCAGGAGATTTTTTcggaaagaaataaaaaca
ttggaatattttttgatcttaTCAATCTGTTacatcaatattttttaact
tcaaaaaaaaacttaactGCGTTGTATCTAGATAAGATTTAAAACGAAAT
TTTTCTTGGCTTTTACGAACAAGAAAGGACGTACTGATTTTCGTTAAAAG
AAAAGCGAAAAATTCTACTAACAATAAATGTTTTTAACAATTAATTCATA
GCCGCTAAAGACTAACtttcttgaagaaaaaaaaaaatatgcaaCATCAC
ATGATACATCCAGGTAATTCTAGATTCCAGAGACCCCTTTCAAGGAGGAA
ACCTTCGAATTCTGgtgtttgttttttaatattCTTCCATCTTCTTTTAA
ACGAGGCTCTTATAGAAAACATGTGTATGATTCGATCTCGAATGTTGAGT
TCGCTAGTTTTGGATTTATGACTTTGTAGTTCTAAATGCGCATAACGTAC
TGGAATACACCCTTATTTCActcattttgaaaacaaaactaatgCTAATC
TTTCTATGACCCAATTCGGTCactaatttttcaaagaattaaCCTTTGTA
GTCTTTTGTCAGTGCATTTAGTGATTATTAGTTTAAATTTGTGTTGGTAG
CTTAATTTCTTTTCggtttaatgatttttttaaagaaactatAGATGATT
TATTATACTTTTTAATTACCTAAATTaccaaattttttataaaattatca
taTATATTATACgtgtaaatcaaaaaatttattatCAAATTATTATAGTA
TATGGTGCTTccggaaaatttaaatattaggattattttttttcggacac
gcTGCGCAATGTGTCTGTAGAAAATACAGAAATAGAATTGATATTAAATA
TCGTTCATGTAATTCAAGCGATGGCTCTTATATCGATgaaactaccttaa
gggaactaattttggcgggaactaattttggcggatttggtgaatttaga
cgaaattctccaaaattagttcctgccaaaattaaattttttgtttcctt
gcctaaataacccctgaaattcatcaaaattgctcaaaataaggcaaaat
agaacagatttacgctgccattcgccaaaattagttcccgccaaaattaa
aaattttaggatatttgctgcctgccaaaattagttcaggccaaaaaagt
tcccttaaggtatattcCGTTTTTCGCAGACGCACTTTATATCAGAGAGC
TAAGAGAGTGTCAAAAATTATTATTACTATTGTACAAAGGATAAGATTTT
CAACACTTGTTGGTTTATAAATTAtatggaatttaattttgcaaaaaaaa
tagatttttatgGTATAGATTTTATTaggaaaatattaaatttttacttc
ataGAGAAAGAAGAACCTATATGGTATTCATTAAATTATTTACTGTCCCA
ATTTTTCTTCATTGTTTATCCATCTTTggacaagatcttttttcggaCAG
TACCTGATAACTGTTGTGGTCAGTGTTGTAGGAAACGAATTAAAATGTTT
TCCTAACAGCTGTTATACAtttgtaatagaccttttcataaattacgtca
tgaacatcacttgcctcgtattcaaacaatttccatggtgatcatatccc
ttgagacattaaatgatttttttaagaataggaagtagtt

Coding sequence (CDS) from alignment at sc0000408:176230..189119+

>TCONS_00022214 ID=TCONS_00022214|Name=TCONS_00022214|organism=Clytia hemisphaerica|type=CDS|length=7686bp|location=Sequence derived from alignment at sc0000408:176230..189119+ (Clytia hemisphaerica)
ATGGCACTGATGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATA
CCAAGAAACTGGAACAACAATAACACCATCAAATGGTCTTCATCCAGCAC
TTGATACTACTGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGG
CTTTGCAACAATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGAC
ACAAGACGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAA
CAACACAGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAACA
GCAGCAAGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTT
GAATCAGCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCT
TTTTGCATTCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAAT
GACATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGG
ACCTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACC
CTAAATTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTA
CGTCAAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGG
TTCAATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACT
ATGAGCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACT
GAAGATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTT
CCTCCTTACACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAAC
TTCAGGATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAG
GCAAGCCCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAAC
TGGGCTGTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATA
CATCATTTCCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATT
GCTAAAGTGAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAAT
GGCACTGATGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACC
AAGAAACTGGAACAACAATAACACCATCAAATGGTCTTCATCCAGCACTT
GATACTACTGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCT
TTGCAACAATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACAC
AAGACGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACA
ACACAGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGC
AGCAAGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGA
ATCAGCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTT
TTGCATTCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGA
CATATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGAC
CTCCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCT
AAATTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACG
TCAAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTT
CAATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTAT
GAGCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGA
AGATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCC
TCCTTACACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTT
CAGGATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGC
AAGCCCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTG
GGCTGTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACA
TCATTTCCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGC
TAAAGTGAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAATGG
CACTGATGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAA
GAAACTGGAACAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGA
TACTACTGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTT
GCAACAATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAA
GACGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAAC
ACAGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAG
CAAGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAAT
CAGCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTT
GCATTCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACA
TATTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCT
CCTGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAA
ATTCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTC
AAGTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCA
ATGAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGA
GCATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAG
ATCGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTC
CTTACACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCA
GGATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAA
GCCCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGG
CTGTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATC
ATTTCCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTA
AAGTGAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAATGGCA
CTGATGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGA
AACTGGAACAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATA
CTACTGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGC
AACAATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGA
CGAACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACAC
AGAATTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCA
AGAAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCA
GCTATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGC
ATTCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATA
TTTTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCC
TGTGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAAT
TCAACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAA
GTTGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAAT
GAAAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGC
ATTTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGAT
CGTGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCT
TACACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGG
ATCTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGC
CCTCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCT
GTTAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCAT
TTCCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAA
GTGAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAATGGCACT
GATGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAA
CTGGAACAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACT
ACTGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAA
CAATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGACG
AACACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAG
AATTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAG
AAAAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGC
TATTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCAT
TCTGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATT
TTGCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTG
TGAAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTC
AACTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGT
TGAGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGA
AAGACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCAT
TTGGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCG
TGCTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTA
CACCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGAT
CTTGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCC
TCCTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGT
TAAGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTT
CCAGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAAGT
GAGAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAATGGCACTGA
TGGACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACT
GGAACAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTAC
TGCATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACA
ATACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGACGAA
CACGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAA
TTCATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAA
AAATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTA
TTGCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTC
TGAAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATTTT
GCCCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTGTG
AAGTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTCAA
CTTTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGTTG
AGCAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAA
GACAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCATTT
GGATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCGTG
CTcgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTACA
CCTCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCT
TGCAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTC
CTGCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGTTA
AGTTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCC
AGCCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAAGTGA
GAAGGATGTATCATCCCTACAAACAGGCTACAAGCTAAATGGCACTGATG
GACCCAAACATTTTGAGCGTGTTGAACGGGTTATTATACCAAGAAACTGG
AACAACAATAACACCATCAAATGGTCTTCATCCAGCACTTGATACTACTG
CATCCTTCCAGCCAACCAATGACGATCTAAATACTTGGCTTTGCAACAAT
ACGGAGGCTTTGAAAGGCCAATCAAATGCGTGGACGACACAAGACGAACA
CGAGACTAACTCCAAAAAGGCAAGGTTGTATAATTCAACAACACAGAATT
CATCTAACCAACTCATAACAAATTCAACTACCACAACAGCAGCAAGAAAA
ATGAATGTTCCAGACGAGCTCACCGCTACAGAATACTTGAATCAGCTATT
GCAAGACAAAACTACTGTCTCAAAAATGCCGAAGATCTTTTTGCATTCTG
AAAGACTTCTAGATGAAGaaattagTCGTGTACGAAATGACATATTTTGC
CCGTCAAGCTTCTTGATGTCACTGCCAAAACCCTCTGGACCTCCTGTGAA
GTTAACTGAAAAAGTTTATGCAAAAGTCAAAGATCACCCTAAATTCAACT
TTGTTGGTCGTATTATTGGTCCACGTGGTCTCACCTTACGTCAAGTTGAG
CAAGAAACAGGAGGGAAGCTTCTTGTTAGAGGAAGAGGTTCAATGAAAGA
CAAGAAAGTGGAGGAAGAAAAACGTGGACAACCAAACTATGAGCATTTGG
ATGAGGATCTTCATGTTTTGATAATGGTTGAAGATACTGAAGATCGTGCT
cgaatgaaattgaaaaaagctgTTGAAGAAGTTAACTTCCTCCTTACACC
TCCAAAAGACGGAGAAGATGCGATAAAAAAGAAGCAACTTCAGGATCTTG
CAATTTTAAATGGTACTTACAGACACCCCAACAGTGAGGCAAGCCCTCCT
GCTGCTGCCACAGTCACTCAAAATGGTGtatCTCCAACTGGGCTGTTAAG
TTTTCCGAGTCCTTCACCAGTCGTTCCACAAAACAATACATCATTTCCAG
CCATCCGAAACTCAGCAGGTCAACTAAAAGCACACATTGCTAAAGTGAGA
AGGATGTATCATCCCTACAAACAGGCTACAAGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012455XLOC_012455Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022214-proteinTCONS_00022214-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022214-exon-sc0000408-1491911889:176230..176459TCONS_00022214-exon-sc0000408-1491911889:176230..176459Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:176230..176459TCONS_00022214-exon-sc0000408-1510915933:176230..176459Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:176230..176459TCONS_00022214-exon-sc0000408-1575043694:176230..176459Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:180302..180537TCONS_00022214-exon-sc0000408-1491911889:180302..180537Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:180302..180537TCONS_00022214-exon-sc0000408-1510915933:180302..180537Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:180302..180537TCONS_00022214-exon-sc0000408-1575043694:180302..180537Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:180962..181086TCONS_00022214-exon-sc0000408-1491911889:180962..181086Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:180962..181086TCONS_00022214-exon-sc0000408-1510915933:180962..181086Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:180962..181086TCONS_00022214-exon-sc0000408-1575043694:180962..181086Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:181635..181895TCONS_00022214-exon-sc0000408-1491911889:181635..181895Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:181635..181895TCONS_00022214-exon-sc0000408-1510915933:181635..181895Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:181635..181895TCONS_00022214-exon-sc0000408-1575043694:181635..181895Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:182070..182193TCONS_00022214-exon-sc0000408-1491911889:182070..182193Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:182070..182193TCONS_00022214-exon-sc0000408-1510915933:182070..182193Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:182070..182193TCONS_00022214-exon-sc0000408-1575043694:182070..182193Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:182394..182483TCONS_00022214-exon-sc0000408-1491911889:182394..182483Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:182394..182483TCONS_00022214-exon-sc0000408-1510915933:182394..182483Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:182394..182483TCONS_00022214-exon-sc0000408-1575043694:182394..182483Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:185579..185693TCONS_00022214-exon-sc0000408-1491911889:185579..185693Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:185579..185693TCONS_00022214-exon-sc0000408-1510915933:185579..185693Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:185579..185693TCONS_00022214-exon-sc0000408-1575043694:185579..185693Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1491911889:186294..189119TCONS_00022214-exon-sc0000408-1491911889:186294..189119Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1510915933:186294..189119TCONS_00022214-exon-sc0000408-1510915933:186294..189119Clytia hemisphaericaexon
TCONS_00022214-exon-sc0000408-1575043694:186294..189119TCONS_00022214-exon-sc0000408-1575043694:186294..189119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:176230..189119 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	5.00986e-05	3.38845e-09	6.51545e-10	0.000161436	1.11164e-06	1.42895e-05	1.409e-05	0.00344195	0.00474817	0.0661781	0.473952	0.0705413	0.142532	0.0329401	0.0102317	2.00068	1.43649	0.00432011	0.00584395	0.0176343	0.0531568	0.000127171	7.10336e-08	0.00285447	5.30886e-08	1.89149e-10	4.67449e-09
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR032377STAR_dimer
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003723 RNA binding
Blast
[Close]
BLAST of TCONS_00022214 vs. Swiss-Prot (Human)
Match: QKI (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.175e-64
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 1 
Query:  379 EYLNQLLQDKTTVSKMPK---IFLHSERLLDEEISRVRNDIF------CPSSFLMSLPKPSGPPVKLTEKVYAKVKDHPKFNFVGRIIGPRGLTLRQVEQETGGKLLVRGRGSMKDKKVEEEKRGQPNYEHLDEDLHVLIMVEDTEDRARMKLKKAVEEVNFLLTPPKDGEDAIKKKQLQDLAILNGTYRHPN 930
            +YL QL+ DK  +S +P    IF H ERLLDEEISRVR D++              LP   GP V+L EK+Y  VK++P FNFVGRI+GPRGLT +Q+E ETG K++VRG+GSM+DKK EE+ RG+PN+EHL+EDLHVLI VED ++RA +KLK+AVEEV  LL P  +GED++KK QL +LAILNGTYR  N
Sbjct:   16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDAN 208
The following BLAST results are available for this feature:
BLAST of TCONS_00022214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QKI3.175e-6458.55Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
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