TCONS_00022200 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022200
Unique NameTCONS_00022200
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2357

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022200 ID=TCONS_00022200|Name=TCONS_00022200|organism=Clytia hemisphaerica|type=transcript|length=2357bp
CTCACCAGCACCAGACCACCAACCAACCCAACCACCATCAAAGTAATCAG
AGCACCAGGAAAGATCTAGTATTAAAATAATAAAGTATTCCACAAGATGG
GTTCTGGATGTTCGGCTCCATTACCAGATCTTCCTTACAAGGATATCATG
GCAATGTCATTTCGAAATGATtcaattgtttgtttttatgcAAGTAAAGC
TGAATTGGAAATAACAAGGAATGCGATCCTCCGATGTTGGCCAGGTGGTA
TACAAAGAGAGGGGCCAAAAAATCTGGACGAAGAGCACCCAGATGTTGGT
GAACCGAAATGCTATAAATTCAAGTTGACTGGTTACCCGTTCACAATTGG
TGGTTCTAAAGAGAACTCAACAGCTGTTCGTAGAATGGCTACTGCAATGC
TTTTTGAACTGTATAATTTGGGATGGAAATTGCTTGTATCAAGTGATTTG
AGTCGAACAATGGATGTGGGTACGTGGTTCTTTCAAAAGGAAGCTCATGC
ACCCATGCAATATCCAATGTTTTGTATCGGCATCTCCAGCTACGACAAAT
TTAATATCATTGATTGTCCAACAAACCTGCACTCTGTTATCCGAGATGTT
TGTACAAGAACATGGGCATCAGGAATTCAGAATGAATCATTAGATGGCAA
TGTATACACAataaaatTCAATGGCACTCCTTGGAGCTATGTGGATAAAA
TTCAATCATGTACATCTCGCTTGATGATCCGTGAAATTGTTGGTGCTTTA
ACTGGATATCAAGTGATGCTTTACGGGAATACTAATCTCAAATCCACGGC
TGATACTTTTTTCTTCAGATATGTTCCAAACCAGCAAGCTGAGCAATTTA
CGACTGTCAGTTTGAATCGAATGGATCGACTTCGATTGATCCATATGGAG
CCCAACGTTGTTTCTGCCATTGAAAATTGTGTACGTCAAACATGGGTTCG
TGGAGTACAAGAAGTCTTAGATAAAAGACCTTTGTGTTATGAATTGAAGT
TGAGAGGCTATCCATGGTGGTGCTATGGGGAGGAAGGAGTATCAGCTCGA
CTCCTCATTTGCCGCATCCTGGAAACAATGGCAAGCATTGGATACTACAT
TGTGTCAGGTCTAGATGTTACACGAAAAGATAACGATAAGTCGCTGTTAT
TGTTCAGACAGGGTGCTCCGATGCAAGCACGTTTCTTGGTCTGTTCTTTG
AATTCAACTGATAAAGTCAAACTTATAAACGCTCCCAATGAAGTTGTTCA
GGCTGCTCAAAGAATCTTTGCATTATGGGTATTAGGACATCAAGTGAAGC
CGGCAGCTGAACTACCACCTGGCTGCTCTTACCAAgtgAAATTGAACGGA
AACCCATGGTCGAATATGATGGTCAAAGATGGTTACCACGGACGTGCTTT
ATTATTAGGATTACTAGGTGCTTTTTCTGACCTCGGTTGGCGTCTGGTCA
CATCAGCTGATGTTTCTGCGAAGTATGTTCACCAGGACAAAGGACCGGAC
TATCCTCTTGATGTACACAGTTGGTATTTCATGTATGACCCAAGCCTTCT
CGCACAACGTCAACCTATGCATCAACAATATGGATTACTATATCCCACCC
TTCCTGTTCAGGGTGGCCCGCCACCTGTTTATTATGCACCGCCACCAGCA
TACGCCCCACCGCCCCCAGGTTACAATCAGGTCGCCCCACCTCTAATGCC
ACCTCAGTAAGATTTGGTTGtttcaaaatggaatattttgaattttattt
gcttGGACGTTGAATGGTATTATGTTTTTGGTTCTGGATCATCCAAATTC
CAAGGTCATTTTCATATAttatgatggtatgatggttgacaataaatttg
aaaaatttaactgactgttttaaatatattttaaaatggGAATTGATTGG
TAGGTATTGATGCTTGTTCAAGAGGGGGTAGTTAGAAATATGATGGtatt
aatatttttgtaagGTAATATTATCGAATATATAACTTTGATATAATCTT
TAGTAGTATAAGTGTCTTTAGAGTATTTGTGTATAATATACAATCTGTCT
TGTAATTTTTGTATAATTAATGTTATTTCTGTTTTCTAGATTTGATAATT
CTCACGTTTtctgttttgttattttttctaataTTCAATCCACTATGTCC
ATactatatttattttttgagtgAGCTCGCTCAATACTTACTTTGTATTC
TCCTCATACATTTTTTGTTTGGtgcttttatttttcatttctgtcATATA
TATAcaagatataaaaaatatatagaatGAATATGTACAAATATTGAAAT
ACAATTGCAGAATTTGGAGTTTGGCAATTGAAATATCTCCAAAATAATAC
AGTGGGc
Run BLAST on NCBI

transcript from alignment at sc0000408:132582..150947+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022200 ID=TCONS_00022200|Name=TCONS_00022200|organism=Clytia hemisphaerica|type=transcript|length=18366bp|location=Sequence derived from alignment at sc0000408:132582..150947+ (Clytia hemisphaerica)
CTCACCAGCACCAGACCACCAACCAACCCAACCACCATCAAAGTAATCAG
AGCACCAGGAAAGGTATTTAAATTCTCCAGTATCTGCCTTGTTTTGTTTG
ACTTCGTGCTTTGATGGGCTTTGGAATTTAATtgggcagttccagaaaaa
aaccatacCCCTCTGGACGACGACAcagaatttttggattttttttgctt
gtttgttGGAAATCCTGAGCtgagaaattttgtaaaaggtTCTTCTCTGG
AAAATGCAAGATTTTCGTAATTATTTGGTCATCTGTATCAGAAAATCCAT
ataatttccttaaaaaatcttgaatgtttATTACTGTAGTCTTACAGTGT
AGCCCtgtctaaaacagcatctaataacatgaaaaccagaatacgattct
tcaatgggaatcaaaactataaagtgcacttacaaacatcaatttgtcag
atctaacaaaattaataactgcactttcatcattgacaataaaacaaacg
attttctgtcaagagccttgtaaacattccaacaacttccatcaaaatga
tctatcacagttCAGTCTACTGGACAAAAGTCATTCATTTGATTAATACT
TTTatgttttcttaatttttagaatGTTTGGATCTAAAAATATAAGACAa
gaagaaatatgaaaaataaggtaaaaactaTGAGGCCATAATTATGGCAC
AAGGACGTATAGTCCTAATCAGTTTGTCAATATATACAGTTCACAAGAGG
TATACAGTTCACTCTTCTccatctaccatttttagcgcgatccgaggatt
gagccgagaacgctccgtgaactcctgcgcgggtgaaaacttcaatctgt
caatcattttctcaagcgaagagtacgcgaagcgattctagctttacgat
agtgccgcgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcgggacttt
ggcttaagtgcttgagtgcagcatagggtacaaagtccaaacatgcgttt
cccgtaatttttgtatgaagagttaggtctatactgtcttAGTACGGAAA
tcctgaattttttcaaaagttaattGTTGGACACTGTCAACAagaccaga
cgatctcaatcgaacagaatcgacgatcgaaccagtcaaagcaaattgaa
cgcaatcgaccgatagaaattcgattgtcgaatgcaatcgaatctcaatc
gaatgtcaaaattctgggtaatattcgattggttcgattaatttaaggtg
gtaaaaataaaaaatgtaagtattttttaacacttttgaaCACATTTTCA
TGAAACAAATGGGAAATTAAGGTGGCATAAGTGGCATAAGTGGCATAAAT
GGTGCTGAAACAAATGGACCCAAAGTTGTCCTTAATTTTAACCgtgatat
tttacaaaaagaacaatttattGTCCTTTTTGGGACCGAATAACCAAAAT
TTGCTACCTGAAAATTAATTGTGAACCATTCATACagttttgtgcaaaat
tttagcttaaaTAAGCTGATAGTTTTGGCACTATTttggaaaagataaaa
atggTTGAATCTCTAGTGTTAAAGCACAATAAAAGTGGTTAATTAAAGCA
CAAAAAGTTGTAGTTAGTTAAAATACATTTGCCTTTAGcaggcttcggca
taagaaaaaagaaggcgtgtgatcatcgcacgcctacatagtgattttta
gtaatttaggcgtgCGAATCATGGCACGCCTCATTTTCTTTAGACGTGCg
atcgttttttttcttttattttataaacatcATTAACAATGATGAGGCAC
AAACTTTTGAACAATTCCTAAGAATGATCTTTCTTTTATCTACATAAAAA
ATAGACAACAGNNNNNNNNNNNNNNNNNNNTTTTGAACAATTCCTAAGAA
TGATCTTTCTTTTATCTACATAAAAACTAGACAACAGGAAAGAAGAAAGT
GTATATTCAATCTTCAtacttgaaaaacaaaaacagaaaccaAAAGAGCA
CTGAATAATCAAGAAGGAGAATACTTTACAGGATATACtatttacagaaa
aaatatctatctatctatctatctatctatctatctatctatctatctat
ctatctatcaagAAAGGCCGAGATATTTTCGGTGTAGTAGCCACAGTTAG
AAATGACTGGCCTCCCAGGGACGCTAGATAGACGCTTGTGGATTTTTGGG
AGAAGATAAAACCTACCCAACCTGGGATTATTGACAAGAAAATAATCTAA
AGTCTTATCACCAATGTCACCCCTAACCTTTATCTTTAAAAGGCAACTTT
CAATTATATCAATGAGACGACTTCCACCAGAGACGACTGTTTGTATATAT
CGGTGCCAAATACCCACCCATCCAACAAAacaatcggtcacgtaactctc
gaacccccatctcaaaaatccataatggctcccccacggctcactcacat
tagacttttagtatatagactagcNTAATTGATGAGTCGTCTCTTAAAGT
TTCTAAGGCTTCCCTTTCAGGGCGTGTAAGATTGTTATACGTCAATTTTG
TATCAATATTATTTATCTCTTCTTCCAAACGGCTTAAATAAACCTCGATG
GCTGCATCTTTGCCCCTAGGATTAAAGGAGCTTTTTTTCACAAAAGGATT
TGGAATAAACTCCCGGTCATCATCCCGAAAAAACCACCGCAGCCTAAGTT
TCCGACCAAAAACTTCAAGCTCCTCcttaagtttatttttattaacTCGA
GAAGGAGTGGGAACAAACTTCAAACCCTTTGAAAGAAGAGATATTTCAGC
TTTTGATAAATTTCTAGATGACAAGTTGATGACGTTTTCGCTTACAAATT
TTCCTATATATCTATCATTTGTATCTTTATTGCAACTATTGTCACCCATT
CCAGTAGATTCCAGGGTTACCTCTTCAAAATTTTCCGATTCTATGGACTC
CCCAGTAGAACTGTTGCTCTGACCCGAAGTTTCAAGGCACGAGTTATCAA
CAGACACTGACGAGGTATTGCTAGTGTGGTCCAGGGTGAGCAAATACACC
ATATTTGTAAAGTCCTCAGATAGCACTTGTCCATAATCAAGGAGAGAGCT
AACGAAGTCAAACTGTTCCTTATGCTTATCCATCCTTTTCCCCACATCAG
ATAGTAAAAATTTGTTCTCACCACACAGCTTccttaatttcttctttttc
ttcgcCAAGGTCTTTACTTCCAACTTTTCCAAATCAATAACTAATTTCAC
GAGCCAATCCGTCATCACATCAACATCCGTCCTGTTTGCAAAGTCACTGA
CACCATCCCAAAAGTTTGTTTCCAAAGAAATTCGTCTTTCATTGATACCA
ATAATTAAAGTTTCCAATAATTGTTTCTCAGTGTGTAAGATTGTCTCGTT
CCATGTTGCTATTAATTCGCCATCTTCGAAAGGAATAAAAGGTTGCTTTT
TCAGAGcaatctatctatctatctatctatctttaGGAAAACAAATGAGA
AGAAGAATCATGCAGCAAAAGTAACTTTTAAGAAGAGCTAGTTTTTTGTC
ATAAACCAACGACCTCATAAAcatagcatgcgagagggaaggaaaaagat
ttgagagaggaaaaatcatacagcaaaagtgattttttttaaaggtttta
gagAGACGAAAAATCGTGcagcaaaagttatttttgagaaaGGCTTGTTT
ATTGAAGACCAAAGCATAGTATGAGAGAAAGAGGAGAGAGAAGATGTGTA
TCCAttagagtaacttttttataagaaattttgtaTACATATAGTAGTTT
GAAAGAGTAAAGGAAAGTTTATCTTTCATCTATCTGGTTCTTATGATTAA
AGTAGAAAATTATATTTGATCTTCTTTCAACaagcagaaaaaatatttct
agaatAAATTTTTGCATGTGCGATTGATCGCACATCGCACGCCTCCCTAG
GTTTTCATGATTTATGGCGTGTGATAAATTGCACGCCTAAAAGGCTTTTA
GGTGTGTGCGGAGGCGTGCGCGTGCGATCGCACGCCTAATATGCCGAAGC
CTGCTTTAGGACAACAGATTGTCCACGAGAGGGGGCCGTTCAACAATTTC
AACCTTAATTATCTTATGTTTGAGGTATTTCGAGCCTGATCTGTAAGGAT
cttgaatgaatttttgttttaaagttgatTTTCATGACAATTAGTTGCCC
ATACTTTACAACATTTAGGACAATTTATTGTCCAtttttggaccttttta
caagattttagAATTGGAATCTTGTAGGATAATGTTCTACATGTGTACCA
AATTTCGACTTGATCAGAGCATCCTATCAAGACTTATTGATCTTGGATAA
CTCATTATCCTTTCAGTTAGGACAATTCATTTCGCAGTTCAAAAGCTTAT
ATCTCTTTAAGTATACCTTTTACAGTTATGGGACCAGCATGGGTCCGAAG
ATGGACCTTTTAACTTAACCATGGGTATTAATGTAGGGCCTGGTAGACAT
TTATGAGTctgtaattttcaaaactagTCAGGGATGTAAAGATGgtgcaa
aaacagccatttgtCCTGTTACGGCAGGAAAAAAATGAATGTTAAAGTGT
CGTGTCAGGTGTTTTTGGTTTGCAAATATAGAAATATCATTACCCAACAA
AACACCCGACAGCACCGGACAGGGTCGTCTCAGAAAATCCATGTCGTTCC
ACATGGCACAGACTACCGTTAAGTCTGCTTCCCGGTAAACTTGCATCAGT
TCAGTGcacagtggaggctaacatgcatagtccCAAATGAAGACCcttct
ggtcattaaaatacaatgtTGAATGTTAAATCAAAGCAACCAAAtctgat
ttacaaaatttgtgGGTGTTAAAATGTATATCTCCTAATCATAAGTGATA
TCATAtcatgcataattatgtttATTAAATTTGGGGTTGCACGTCCAGCA
GCCATGGAGGAGCAGAGAAATGCTAAATTCCCGCCATCCTGAAATTTATG
ATGATTCAAATTtaggtaacctgagatcagattgtgattgttttcttcGC
ACCACGCTAAAGCTCTCAAAAAGGGATGTgtaaaaacaaacaatctgatg
AATATTATGCAATATCTGAATTAATTGTAAGGACCGCATTTGTCTTACAA
GGAataggaatgacaacaaagttgcgtgattgtgtttatgaatagggcgc
tgTATCAGTTAGTTTTTTACTTTCTGGTGCACAACAAGATCTTCGGTTCG
CGTCGCCTGAcggactctcgaaaattgagtagaattgagtcggtgagtca
gtaaatttgtcggactttttctgtcaataACCTTTCctttgttcaaaatt
tttattattgccgatttaTTGCAAGCAATTTCTAGCGCATttgcagcatt
ttgactttgtttatcattacatgtgctattttggggtcggaggtcacagt
gttcaaaggtcataattttaaaccacccattacacgcggttgttttggct
gctggctggctggcagtttcctccaagaatgTACTCCAAAAATGGATAGA
AAAATGGAAAGCCAAAATTTTTatgaccgaccgactcactttttagaccc
taCAAGGACGCGagatgaagatatttgtgattgccgccctATTTTCCTCa
catgtataattttcaagtgccttcagaggtttaccgtgcgtaagaaaatt
acgaacagctgttatcaggttaaatTTAGGAGGCtcttggaggttcggtg
aaattgTGGCTGAATtactgtcccatgttttgtcaggtagtcccaagtta
gagtagttgatggtatcatacccaaggtgatgaaGGAGCTAAAATGAGAT
ATGATGTATTAGTCATTCAAAGCttctttttttggacctaccccggtggg
gtggaggtcctataaattaacccatgttcgttagttagttagttagttac
cagcttttctcgagattggctcattagttttttctgatttttggcacaaa
ggtgcatgaccataaaccctcaaatgtgatgTAGCCCGAAATTTTGgtgc
aaatttgggccaaaaaacggcttaaaaacgggttttttggactttgtgaa
aaatcggatcataaattttttctgatttttagcatgaaagtagggtacaa
tcatagttaaaagatggctcaagcagatttttgcgaaaaaatttttttgg
ctctaaaatcgcatttttatctataagaaccacttttaataagaatacat
caatgttcttagccatgttattattgttatttttattagttttttttaac
atgaaaatgtcacggtgcagggtaatggtttgagttttctagaaacactt
attatttttttggctgaaaaacgaatctttatctataagaatcactaatt
ATAGGCAtggatcaatgttcttagccaaattattattttattattatttt
ttctaaacaatgaaaatgtcaccttagagcgcgatggtttgagtcttctg
taaacacttattattcttttggctgaaaaacgaatctttatctataagaa
tcactatttatgagcatagatcacagtagatcaatgttcttagccaaatt
atttttttattattattttttctaacagaagaaaatgtcacggtagagcg
cgacggtttgagttttcaggaaaccttatttattaagctgtgcatttttc
tgatagtggtttttataaagaaaagcgcttaatagcttttttatttcttt
ttcaaaaatctttttcaatagtgNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNtagatatgctttcattttctttatttttttg
tattttgaccagttatgtcttatgtgtttcattgtttcaatgttcactga
ttagtttgataagcCAGGTAGGtcaggaccctcccggcgctccggaaacC
TCCGGTGCAAAAAGTGCCGTTTTTTTCGTGCACCGGAAcaccggaacgtt
ccggtgcACTTCCGGTGCTTCCGGTGCAAGATTTTTCCGAATCGAGCTGC
ACCGGAAcaccggaacgttccggtgcTTTCGGTGCATGATTTCCGCGATA
TAAATACGATAGCGTTCGCTGCGCTAATCATGTAAAAAGGAACTACGCAC
GCGCGAATTATTCAAATTCTAAAACCAAAATAAACATGttttagcagatt
tttttaGAAGAGAAATCAGATTCTTGGTCATAAAAGTGTGATAAATTGGA
TAAATTAAATGACAGTCACGGAAATCCTTCCATTTGCACGGGGTCCGCTA
CGTTGCATTTGCAACGGGTCGAAATCAAAAGTAGCGCGAAAACCCGGTGC
AAATACACTGGgtttttggaactctgtgcatttgcacggggtggaaaatt
agaaaatttaagattttgcaaTGGTTTTACAATCAATTAACATCATTCTT
TTTGTTTGGAATCGATATTAAGAAGatgaatcaaattcaataaGATATAT
CAGGTAATCCTTCTTTATTgtctttatattttgatttggaaaatAAGAAT
TGTTCCTTCTTATGCTGGCGTAAGGCTGTGGCGAAGGAGTTTATCCGCGC
GGTCATACTTTCGATTTTCAAATGCGGAACATACGAAACTTAGAATACGG
GCATTGTGGGATAACGGTGTTTAATAATCCCGATCCTGCCACTCCATACT
TATTTTTAATTCTCCAGCGGTCAAGATTGGATGAATTACTTCTTCTCTcg
ctgtttcttctttttctttttcatttcagttttcatttttatgggAACAC
AATTGCGATCATCATATCCAGGTGAGACGTGTATTTTCCAACGTCGTAAT
ATCATAATGACACACATCTATTGGCGAGGGCGAGATTATGCTGGAAACCC
TCTGGAGAATACCCTCGTGTCAGAGATCCGGTGGAGCCCCTCGCCCCACT
GGAAAACTTAGCCAAAAATCGTCTGTCTGGTGGCAAAAATAACCTGAAAT
TTTAAACCACTTTAAAAGAACCAAATGACTTTACCCTCAGTGTGGTGGAA
AGATTGCACTGCAAAACCATTCTCTCTGTAAACTTAGAGCTGGAATATAT
ATTTTCTATCCCAATCGGGACACTACNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtgccgcccgactttcgaactttggacccttaccgggactaaaaagg
agaaaacaaaggaaaattttgggaattttacgacccttagcgagagtaat
ttgaccaattttgaccaaatttcgatctttcagggggtaaaaagttgaaa
ttttcctttttttccgacccttactgggactggaattagattttctgatt
tttccgacccttagcgggactttggaagtccaaaaaaggtacccttaagg
gcggcacataccgtaccctccatttgcctaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNcccccccccccccgggggcggCACTGAGACAGTGGTGTATG
TGCGTGAGAGAATGAAAACAACGCccagaaagaaaataaagaccAAACGA
AGTTACGGTCTATATTCTATTAATTTGATTGTAATGATCAATggcctcat
ttttatttttggccacTTTTTGAATGTTGTATATATGTATTTCGTAAcgt
atattattttataaattgttaattttgaaataaaaaaggtgcgttcttat
tttcttcttcacggCTCTTGAGCAACACGCTCTCCCTGATGAACAGCTCA
TAATGGTAACAATCGGTAACATTGGTGGTGGCACTCtaaataaagaatga
aaatcAAAGTTATGACTGTGGAAGATTCGTGGTACGGTAGATTTTGTTAA
GCTTGAAACTAGACAAAGTGACCGTCGCTCAAGTCTGTGGATAAACTGCC
GAAGTTACGGTAACAAGTAACGCACACTAATTGATGGGAAGCACAAAAAT
TGATCTAGATTTCAACATAGATCTAGATGAGATAATTGTTTCATACATAC
AACAATGTAACTTACGCTGTCTAAGGCTCTCAGGCACTTCTTGAGTTTAG
TGAAAGCAGTCCGTAACGATTGTGATATTGACGAATCGTCTCTGCTTCGG
TTGATCCATTTTtcctaaataaaaagaaagtaaaaacattatttgaactT
GAACTTATTATTTACTTTAAAGGTATACTAATTTAAATATAAGATCATAT
AAAGATCAGATGCGTACttctttgttctttatttatCGACGATGTTCCCA
TGTGTGATGAAcgtgataattttttataattgagCAAAGTCCGCCATATC
GTATTATTCCCGACTAACTCTATCGCTGGATAGCCCTGTATCTGACGATC
ATACCTTTTATTGCGCAGTGATCAAATAAAAAGTTCGGTTGGTACTGGCT
AATCACCTTTTTTTTTCGTGACCCTTGTCTAAACGGCTTTTTAGAGCGTG
CGAAAATCCCTTACACCGGAAGCACCGGAAGAGCACCGGAATTTTCCGGT
GTGAAAAATGGCGTTTTTTTAGCTGCACCGGAAAACACCGGAGAtttccg
gagcgccgggagggtcctggtaggtccataaaagtatcgcttgtttttga
agaattggtgcaaaaactGAAACATAGCTGAAtaaagaaaagtttcattt
ttcattgcactaatcgaaataggggatttgacaaattttttaaatgtttg
gtattttgcacaaacccctgtaactatgagCAAgtaccctgttgctaaga
tgttggcttgaaatcgaaaatgaaaccactgaaaacaaaagtaaattgGC
CTGGACTCAAAGAGCCTGAACCattcatgtttttaaaaacaccttgctta
cctggtttgcagaaaacactttccagcatgaaaggttcaatttttaaaaa
caccaTAAACACCAAATGTCCTGTCGAAGGCGACTGCTATAAAACAAGTC
CCGACTGGCTGAAACGGTCCCGAAAAGTCCCATTTCCCcgtttttttccg
attttctagCCCGATTTTTAACCcgatttttatctgattggttCAGTCAG
GAcactgcaagagcttcaaaatcgTCTTGAAAAGCNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTT
AGATCTAGTATTAAAATAATAAAGTATTCCACAAGATGGGTTCTGGATGT
TCGGCTCCATTACCAGATCTTCCTTACAAGGATATCATGGCAATGTCATT
TCGAAATGATtcaattgtttgtttttatgcAAGTAAGTCAAAAGCATACT
TTCTCCAGACGTCTCCATCCTGACGTTggatatcaaaatttgattaaatA
GTGTTGGCTTTCATGATATTAAAGGAACTTTTACAAGCAACTATACACAG
CCATAGAATACTTACTATTAAAATATCTTGTCCATAGTATTAGATTGGTT
TTCAGTTATATTTTCTTCAGTAAACCTCTCCTTTGTTGTGGTGAGGAAAT
AATTAACAAACACAAtccaaaaacctttaaaataacttatattATGAGGT
TTTattaaaatagtttttgaaatagtttttaaaATATGTTATTCTTGTAT
CTTTTAAATCAGGTAAAGCTGAATTGGAAATAACAAGGAATGCGATCCTC
CGATGTTGGCCAGGTGGTATACAAAGAGAGGGGCCAAAAAATCTGGACGA
AGAGCACCCAGATGTTGGTGAACCGAAATGCTATAAATTCAAGTTGACTG
GTTACCCGTTCACAATTGGTGGTTCTAAAGAGAACTCAACAGCTGTTCGT
AGAATGGCTACTGCAATGCTTTTTGAACTGTATAATTTGGGATGGAAAGT
GAGtttacatttttaggcttttcaCTTTAAACATGCTACagctgaatatt
tttggatgtttAATATCATAGTTTTGAGACCACTACACTGGTAGTAGTAA
CtttttgagagcttttttcAATGTATCCTTCTGTTTTCATTAGTTCTATC
CAATTTAAACAGAGTGTAACATCACTTATAAGACTTTGAAAACCAAAGCT
AATACTGCGTGTGTTTTCCAGACGGCTTCAATGTTACCTCAGATAGTTTC
ATTAGTTTCGTTAGAATCTATGATGAGAAACACTGGAGTGTTTGAACATA
GAGtatgtaaatattttaaaatagaatatcaaaggaaagaaaaaatatta
tctttaGCTGAATATTCACATATCTTTATCAATAATAGTTGCTTGTATCA
AGTGATTTGAGTCGAACAATGGATGTGGGTACGTGGTTCTTTCAAAAGGA
AGCTCATGCACCCATGCAATATCCAATGTTTTGTATCGGCATCTCCAGCT
ACGACAAATTTAATGTAAGTTTCTGTTAACATTTTCATCCTCATATTCAA
TCTTAGTATAGGTTCATTCTTTATTCTTATATTGGTAGAGATAATGGACC
AAGCTATAAGGAATAAGagttttttttccaaacagAAATTCCCATGCTTT
TACTAATAAAAGATTCAGTTTGGGCTTTATTTTCCAAGTAAAAGTTTGAA
TGTTCTTTTTTACCCGTATTTGTTCAATTTGATAATAGTGGGGGCCTTAT
GACAAATATCTGACTTTCAGATCATTGATTGTCCAACAAACCTGCACTCT
GTTATCCGAGATGTTTGTACAAGAACATGGGCATCAGGAATTCAGAATGA
ATCATTAGATGGCAATGTATACACAGTAAGAATCNTGGGCATCAGGAATT
CAGAATGAATCATTAGATGGAAATGTATACACAGTAAGAATCTATCcata
agatttttaaaatggcTTTCTGGTCATTTAAAAACAAGTTTGACACAATT
TTTGTGTAGCTACACCTGGTAATATGCCAGAAATGAGTTACCTTCATTGA
TATGCCTGTATTAAACAGTATtagtaagatttttgaaattttttaaaaat
tgaaaattgggcTTTCTTCTTAACGATTCCCATTACCAATTTTTGATAGG
TAGATTGGGGAAGCAAAAGttactttttttattaaaatcaaaaacaacct
ttttttatttcctaTCTCTTTTTACTGGCTAGTAtaatgatttgaaattt
ttaagataaaatTCAATGGCACTCCTTGGAGCTATGTGGATAAAATTCAA
TCATGTACATCTCGCTTGATGATCCGTGAAATTGTTGGTGCTTTAACTGG
ATATCAAGTGATGCTTTACGGGAATACTAATCTCAAATCCACGGCTGATA
CTTTTTTCTTCAGATATGTTCCAAACCAGCAAGGTAACATTGGTCCTCAT
GACTTAACCTTTTGAGgtctttttcaaactttgaattttttccgGGCCTA
GGACCAGTTTCGAGCGTCAAAATAATTCTATCCTATGTACTGACTATCCT
ATACACATTTGACGTGCTTTTAACCTTTATTTTACCAACCTATCTATGAT
TTTTAGCTGAGCAATTTACGACTGTCAGTTTGAATCGAATGGATCGACTT
CGATTGATCCATATGGAGCCCAACGTTGTTTCTGCCATTGAAAATTGTGT
ACGTCAAACATGGGTTCGTGGAGTACAAGAAGTCTTAGATAAAAGACCTT
TGTGTTATGAATTGAAGTTGAGAGGCTATCCATGGTGGTGCTATGGTAAT
TGAAATTGTTCTATTTACCAGGGAAAAATGGGAAAGTGACCAAATCTTTG
ACCAGAAAATCCTACTCGGCCAACTATAGCGTGTATatgattttaaagtt
ttgataaaGAGAGATATCTCTTTTCAAATTCTCTGGTTACTTTGATTTCT
CCCCAACTAGGTAAAGCAAATATTCTTTATCTAGCTTCAATCACCTTGGG
TACTGGTATTAgagatttgataaaattttagggtTCCTAATTGAAGCTAG
GTGCAGGTGCAGCTAATAAACTAATTGCTTGAGTACTGAACATTTGGTAA
CAGGAGTAACTGTTAAACCTTTGAACTCTTTCAATTTCTTTAGGGGAGGA
AGGAGTATCAGCTCGACTCCTCATTTGCCGCATCCTGGAAACAATGGCAA
GCATTGGATACTACATTGTGTCAGGTCTAGATGTTACACGAAAAGATAAC
GATAAGTCGCTGTTATTGTTCAGACAGGGTGCTCCGATGCAAGCACGTTT
CTTGGTCTGTTCTTTGAATTCAACTGATAAAGTCAAACTTATAAACGCTC
CCAATGAAGTTGTTCAGGTTTGATATTCATTTCATTCAATAGCTTTATGA
ATATTTATTTAGCCTACCAAGCGTTGCACCCACCAAGTAAAGTGGTATAT
ACACACAAAAAAGTTCTCTGGATGGTGTTGGACAAGGTTTCAGAGAAAGA
CTGAGCCCAAAGAACATGAAACTTAAAACCAATCAAatcttgaaaatgtt
ttgatttcattcTGTATGTTGTCATTGGTTCAATTCTTTGAGAATTAAAC
AAAATTATCTAAAAGTATCAACAATTATTGACTCTTAGGCTGCTCAAAGA
ATCTTTGCATTATGGGTATTAGGACATCAAGTGAAGCCGGCAGCTGAACT
ACCACCTGGCTGCTCTTACCAAGTAAGAATACTATAGTTTTCATtatctt
tcaaacaaaaatgcTTTGGTGGAAatgttatacattttgaaaactcaagc
aTTTTGCATTCATCGCCTCTATGATTTATCAAAGTGAAGAtgtgtttttt
taactttgcatTGATTTCATTATCTTAGactgaaattgattttctcATCT
CAAATTATTTACCCTGTAATtccatatttttactttttaggtgAAATTGA
ACGGAAACCCATGGTCGAATATGATGGTCAAAGATGGTTACCACGGACGT
GCTTTATTATTAGGATTACTAGGTGCTTTTTCTGACCTCGGTTGGCGTCT
GGTCACATCAGCTGATGTTTCTGCGAAGTATGTTCACCAGGACAAAGGAC
CGGACTATCCTCTTGATGTACACAGTTGGTATTTCATGTATGACCCAAGC
CTTCTCGCACAACGTCAACCTATGCATCAACAATATGGATTACTATATCC
CACCCTTCCTGTTCAGGGTGGCCCGCCACCTGTTTATTATGCACCGCCAC
CAGCATACGCCCCACCGCCCCCAGGTTACAATCAGGTCGCCCCACCTCTA
ATGCCACCTCAGTAAGATTTGGTTGtttcaaaatggaatattttgaattt
tatttgcttGGACGTTGAATGGTATTATGTTTTTGGTTCTGGATCATCCA
AATTCCAAGGTCATTTTCATATAttatgatggtatgatggttgacaataa
atttgaaaaatttaactgactgttttaaatatattttaaaatggGAATTG
ATTGGTAGGTATTGATGCTTGTTCAAGAGGGGGTAGTTAGAAATATGATG
GtattaatatttttgtaagGTAATATTATCGAATATATAACTTTGATATA
ATCTTTAGTAGTATAAGTGTCTTTAGAGTATTTGTGTATAATATACAATC
TGTCTTGTAATTTTTGTATAATTAATGTTATTTCTGTTTTCTAGATTTGA
TAATTCTCACGTTTtctgttttgttattttttctaataTTCAATCCACTA
TGTCCATactatatttattttttgagtgAGCTCGCTCAATACTTACTTTG
TATTCTCCTCATACATTTTTTGTTTGGtgcttttatttttcatttctgtc
atatatatatatacaagatataaaaaaatttagaatgaaTATGTACAAAT
ATTGAAATACAATTGCAGAATTTGGAGTTTGACAATTGAAATATCCCCAA
AATAATACAGTGGGctctcaaacttttttttccgaatttttctataattt
agACGACTTTAGGCCCAGGAGGCGGGTACAAACTTTCGCAATCGAGAcat
aaaaattaatattttcacaCGAAAAAATAGCTTCGAGGGACATAATACTC
CTATACCACTATACTTGAATTGGGTTAAAACTTTAGTATTTTGACTTGAG
GCTTTTAAATAGGCTAAAAAGGGCCACaaatcttacattttattttatgt
tGTAAGtattacagattttctattttgtgaaGAANATGGTGTTGGACAAG
GTTTCAGAGAAAGACTGAGCCCAAAGAACATGAAACTTAAAACCAATCAA
atcttgaaaatgttttgatttcattcTGTATGTTGTCATTGGTTCAATTC
TTTGAGAATTAAACAAAATTATCTAAAAGTATCAACAATTATTGACTCTT
AGGCTGCTCAAAGAATCTTTGCATTATGGGTATTAGGACATCAAGTGAAG
CCGGCAGCTGAACTACCACCTGGCTGCTCTTACCAAGTAAGAATACTATA
CTTTGGTGGAAATGTTATACATTTGAAAAgtctaaaaaaagtttaaaact
cAAGCATTTTGCATTCATTGCCTCTATGATTTATCAAAGTGAAGATGTGT
TTTTTAACTTTGCATTGATTTCATTATCTTagattgaaattgattttctc
ATCTCAAATTATTTACCCTGTAAttccatttttttactttttaggtgAAA
TTGAACGGAAACCCATGGTCGAATATGATGGTCAAAGATGGTTACCACGG
ACGTGCTTTATTATTAGGATTACTAGGTGCTTTTTCTGACCTCGGTTGGC
GTCTGGTCACATCAGCTGATGTTTCTGCGAAGTATGTTCACCAGGACAAA
GGACCGGACTATCCTCTTGATGTACACAGTTGGTATTTCATGTATGACCC
AAGCCTTCTCGCACAACGTCAACCTATGCATCAACAATATGGATTACTAT
ATCCCACCCTTCCTGTTCAGGGTGGCCCGCCACCTGTTTATTATGCACCG
CCACCAGCATACGCCCCACCGCCCCCAGGTTACAATCAGGTCGCCCCACC
TCTAATGCCACCTCAGTAAGATTTGGTTGtttcaaaatggaatattttga
attttatttgcttGGACGTTGAATGGTATTATGTTTTTGGTTCTGGATCA
TCCAAATTCCAAGGTCATTTTCATATAttatgatggtatgatggttgaca
ataaatttgaaaaatttaactgactgttttaaatatattttaaaatggGA
ATTGATTGGTAGGTATTGATGCTTGTTCAAGAGGGGGTAGTTAGAAATAT
GATGGtattaatatttttgtaagGTAATATTATCGAATATATAACTTTGA
TATAATCTTTAGTAGTATAAGTGTCTTTAGAGTATTTGTGTATAATATAC
AATCTGTCTTGTAATTTTTGTATAATTAATGTTATTTCTGTTTTCTAGAT
TTGATAATTCTCACGTTTtctgttttgttattttttctaataTTCAATCC
ACTATGTCCATactatatttattttttgagtgAGCTCGCTCAATACTTAC
TTTGTATTCTCCTCATACATTTTTTGTTTGGtgcttttatttttcatttc
tgtcATATATATAcaagatataaaaaatatatagaatGAATATGTACAAA
TATTGAAATACAATTGCAGAATTTGGAGTTTGGCAATTGAAATATCTCCA
AAATAATACAGTGGGc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012451XLOC_012451Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022200-exon-sc0000408-1491911889:132582..132644TCONS_00022200-exon-sc0000408-1491911889:132582..132644Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:132582..132644TCONS_00022200-exon-sc0000408-1510915933:132582..132644Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:132582..132644TCONS_00022200-exon-sc0000408-1575043694:132582..132644Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:144534..144663TCONS_00022200-exon-sc0000408-1491911889:144534..144663Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:144534..144663TCONS_00022200-exon-sc0000408-1510915933:144534..144663Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:144534..144663TCONS_00022200-exon-sc0000408-1575043694:144534..144663Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:144994..145229TCONS_00022200-exon-sc0000408-1491911889:144994..145229Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:144994..145229TCONS_00022200-exon-sc0000408-1510915933:144994..145229Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:144994..145229TCONS_00022200-exon-sc0000408-1575043694:144994..145229Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:145620..145745TCONS_00022200-exon-sc0000408-1491911889:145620..145745Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:145620..145745TCONS_00022200-exon-sc0000408-1510915933:145620..145745Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:145620..145745TCONS_00022200-exon-sc0000408-1575043694:145620..145745Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:146002..146106TCONS_00022200-exon-sc0000408-1491911889:146002..146106Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:146002..146106TCONS_00022200-exon-sc0000408-1510915933:146002..146106Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:146002..146106TCONS_00022200-exon-sc0000408-1575043694:146002..146106Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:146487..146664TCONS_00022200-exon-sc0000408-1491911889:146487..146664Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:146487..146664TCONS_00022200-exon-sc0000408-1510915933:146487..146664Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:146487..146664TCONS_00022200-exon-sc0000408-1575043694:146487..146664Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:146838..147026TCONS_00022200-exon-sc0000408-1491911889:146838..147026Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:146838..147026TCONS_00022200-exon-sc0000408-1510915933:146838..147026Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:146838..147026TCONS_00022200-exon-sc0000408-1575043694:146838..147026Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:147375..147598TCONS_00022200-exon-sc0000408-1491911889:147375..147598Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:147375..147598TCONS_00022200-exon-sc0000408-1510915933:147375..147598Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:147375..147598TCONS_00022200-exon-sc0000408-1575043694:147375..147598Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:147870..147953TCONS_00022200-exon-sc0000408-1491911889:147870..147953Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:147870..147953TCONS_00022200-exon-sc0000408-1510915933:147870..147953Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:147870..147953TCONS_00022200-exon-sc0000408-1575043694:147870..147953Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1491911889:149926..150947TCONS_00022200-exon-sc0000408-1491911889:149926..150947Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1510915933:149926..150947TCONS_00022200-exon-sc0000408-1510915933:149926..150947Clytia hemisphaericaexon
TCONS_00022200-exon-sc0000408-1575043694:149926..150947TCONS_00022200-exon-sc0000408-1575043694:149926..150947Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:132582..150947 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.20037	1.43068	1.93476	1.32918	0.359727	0.710653	0.685898	1.12373	1.91067	1.80981	2.16203	1.77654	1.06444	0.544494	1.43896	1.05657	2.20273	1.53936	1.98493	1.92872	0.515818	2.07568	0.0829932	0.556125	0.859193	0.639008	0.182884	0.390357	0.740179	0.6033
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022200 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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