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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022183 ID=TCONS_00022183|Name=TCONS_00022183|organism=Clytia hemisphaerica|type=transcript|length=1436bp
CTTACATTTACATAAATTCTCAAAACCATCTCAGACATTcctttatttgt
tttattaagaacataaggctggTATCATAAATAACATGGATTTTTATCTA
ATTCCATCCTTCATTACTTCAAGACACGgatttcgaattagatttttttg
TAGCTTTTGCTTTGATTCCGTGTAAtttgcacaaaaaaatcaagtaCCTT
AGTTCCCTTAATTTTCGCGCGCCTTTTATTTTCGCGCCTCTAATTTTTGt
gcctttaattttcgcgcagcTCGTAAAATAGAATATTTGTGCATCCTTTA
ATTTTCTCGCATCTTGCAATTTCTGGGATATTTTCTGAGtgttttttacc
attttaagTGAGTTTTACTCACTTTTAGTGTGTATTCAAGCTAGATTTTA
CATCCCTGAGGCATATTTACCATGAATCGAGATCCCATTTTATTAAAAGA
GTCCTAAGATGAGATTTCTACACGTTCAGAACGATTACTAGTTCGCGCAC
CCTTTAATCTTCGCGCGGCCAAGTGGACGAAAATAGGCCTATTTTGTGCC
CCTTTTATTTTTGCGCACGTATTCTGTGCGAAAATAAAAGGGGCGAGAAA
ATTAATGGAATTAGGTAACCAAAACAGAAAGTTGCTGTGCtacaagcaat
tttagctcatttttccatttttggcATACTGTATGGGCCCTTTATCAgcc
aaaaacataaaatgataAGGCCATTGTATAAccttatttcttttattgaa
tttaaagatagaaaaactttttttgaatgaaataaaaagagaaataaaaa
cATCTATCGACATCTTATAATGTGTTTTTACTTCTTGAGTCTTTTTTGGC
ATGGGTAGTTTAATTCAAAACCTATGTATTATCAATCGCACATTACATTG
TTTTacagaaaaatttgattttaaaatatAACAGAGATCATATTAAACTA
TTTCCTATTTGGTTTGGGGAATGTGCTCTAATCTCCCTAGTCATAAAAAC
AGAGATAAtgcatttgaaaaaaagaatggCCATATCGTGAAATCCAAGGA
CCGCACACAGTGACAGATAGCGTCAGGGTTGAGGTTGAGGTCGAGAAAGT
ATAGATTACTGTTCGAACATACATGTTTCTGATTACGAAACATGTAGTCT
ATACCACTAGGCCACACAGACTGCTGAGTTTTCCGAAATTCAAGGTTTTA
TTTAGAGTAACATATGTATTATGTGAACAGACCTTACAAGTTAGGCTAAC
TGTTGTGATCGCCATTCCTACATTTGCAAGGTCAGTACATCATGAAGATT
TAGCCAGTTTAGGGAGTTGGAAAGGGTCCACTTATATTTCTTATATATTT
GTTCTTTGGCCGGCTTAACAATTCTAAAAGCTTTTTGGGCTGACTTTTCA
GTATACAGCTGTTTTAAATAGATTGTAACTTTGTGT Run BLAST on NCBI transcript from alignment at sc0000406:130774..132209 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022183 ID=TCONS_00022183|Name=TCONS_00022183|organism=Clytia hemisphaerica|type=transcript|length=1436bp|location=Sequence derived from alignment at sc0000406:130774..132209 (Clytia hemisphaerica)
ACACAAAGTTACAATCTATTTAAAACAGCTGTATACTGAAAAGTCAGCCC
AAAAAGCTTTTAGAATTGTTAAGCCGGCCAAAGAACAAATATATAAGAAA
TATAAGTGGACCCTTTCCAACTCCCTAAACTGGCTAAATCTTCATGATGT
ACTGACCTTGCAAATGTAGGAATGGCGATCACAACAGTTAGCCTAACTTG
TAAGGTCTGTTCACATAATACATATGTTACTCTAAATAAAACCTTGAATT
TCGGAAAACTCAGCAGTCTGTGTGGCCTAGTGGTATAGACTACATGTTTC
GTAATCAGAAACATGTATGTTCGAACAGTAATCTATACTTTCTCGACCTC
AACCTCAACCCTGACGCTATCTGTCACTGTGTGCGGTCCTTGGATTTCAC
GATATGGccattctttttttcaaatgcaTTATCTCTGTTTTTATGACTAG
GGAGATTAGAGCACATTCCCCAAACCAAATAGGAAATAGTTTAATATGAT
CTCTGTTatattttaaaatcaaatttttctgtAAAACAATGTAATGTGCG
ATTGATAATACATAGGTTTTGAATTAAACTACCCATGCCAAAAAAGACTC
AAGAAGTAAAAACACATTATAAGATGTCGATAGATgtttttatttctctt
tttatttcattcaaaaaaagtttttctatctttaaattcaataaaagaaa
taaggTTATACAATGGCCTtatcattttatgtttttggcTGATAAAGGGC
CCATACAGTATgccaaaaatggaaaaatgagctaaaattgcttgtaGCAC
AGCAACTTTCTGTTTTGGTTACCTAATTCCATTAATTTTCTCGCCCCTTT
TATTTTCGCACAGAATACGTGCGCAAAAATAAAAGGGGCACAAAATAGGC
CTATTTTCGTCCACTTGGCCGCGCGAAGATTAAAGGGTGCGCGAACTAGT
AATCGTTCTGAACGTGTAGAAATCTCATCTTAGGACTCTTTTAATAAAAT
GGGATCTCGATTCATGGTAAATATGCCTCAGGGATGTAAAATCTAGCTTG
AATACACACTAAAAGTGAGTAAAACTCActtaaaatggtaaaaaacaCTC
AGAAAATATCCCAGAAATTGCAAGATGCGAGAAAATTAAAGGATGCACAA
ATATTCTATTTTACGAgctgcgcgaaaattaaaggcaCAAAAATTAGAGG
CGCGAAAATAAAAGGCGCGCGAAAATTAAGGGAACTAAGGtacttgattt
ttttgtgcaaaTTACACGGAATCAAAGCAAAAGCTAcaaaaaaatctaat
tcgaaatcCGTGTCTTGAAGTAATGAAGGATGGAATTAGATAAAAATCCA
TGTTATTTATGATAccagccttatgttcttaataaaacaaataaaggAAT
GTCTGAGATGGTTTTGAGAATTTATGTAAATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022183-exon-sc0000406-1491911889:130774..132209 | TCONS_00022183-exon-sc0000406-1491911889:130774..132209 | Clytia hemisphaerica | exon |
| TCONS_00022183-exon-sc0000406-1510915933:130774..132209 | TCONS_00022183-exon-sc0000406-1510915933:130774..132209 | Clytia hemisphaerica | exon |
| TCONS_00022183-exon-sc0000406-1575043694:130774..132209 | TCONS_00022183-exon-sc0000406-1575043694:130774..132209 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000406 | supercontig | sc0000406:130774..132209 . |
Blast
The following BLAST results are available for this feature:
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