TCONS_00022165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022165
Unique NameTCONS_00022165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4863

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022165 ID=TCONS_00022165|Name=TCONS_00022165|organism=Clytia hemisphaerica|type=transcript|length=4863bp
GTGCTAATGGAAAGTGTTATCTTGACATCAATATAAATGGACATTATTTG
GACGATACACCCTTGACtcagaaatcagaaatcaataTTGAAATACGCAG
AGATAATTTCCTTTATTAAAATAATGAAACTGGAGTGACACATCATCTCA
TGATGTCATCCAAAGGCAAGAACGTACCTGACCCAAAAGTCGGTAAAAAC
TCTACACAATCCAGAAAGAAAAATCCCCGTCGCAGCCAACGCCATCTAAG
CAACGGTGACCCAGTGGACGATTCCAAAGAACGTGCGTCCAAGCGCGGCC
GTGactcaaacaaagattttgatggCAATTATGAAGCAGAATTCCCTCAA
GAGTTGTATAAGaGTGTGATCGACCTTGTTCCGAGTACTGAATATAACTG
TGAACCAACTGAAAAACCAGCACCTCCTGGCACTCAAGTCAACCTTCATG
GTGTCATTCTCCACGAAACTCAAGACGGGCTTCTTGTGCTAAATGTTCGT
TGGAGAAACCAGGTCTTCTCTGGTGCTTTGATCGATGTTGAGAAAACGAA
ATGGGCCTCCGAACGCGTTTCGGCCGAGGGGAATTCGGAGCTTAGTAAGT
TCACCTCCACCCAACCACCCATCAAGAAATTACGCATCCCTACATCCGCC
TTACGCCAACAACACGATGATTCTGATTCGTCCGGAAGTACTAAAAAGAA
GGCCGGAACGACCAGCCCTACAACCAGTGGAAAAAGCAAATCGCGAACCG
GAACGAGTAAAAAACGTGGCGTTACCGCTAGTGTGGAGCCAGTCTCTCCG
CCTCCAGATGACCCACAAACAACACccaagaaatcgaaagtgaaaccact
tACAAACGGTGATGCGGCCACGGCGACGTTTGAATGTCCCGAAACAAACT
GCCGTAAACGCTACAAGAATAAGAATGGGTTGGCGTATCACATGGAAAAA
ACGCACCCGCCAACGCCCAAGAAGGCGGAAAGTTACGAGGAAAAGGACAT
CAAAAGTGACGATTCAGATAGCGGAGATGACAATTTTGTGATCGACGAAA
AAGCCGGCGACGATGATGACGAAGAGGAGGAAAATCCTACGGAAGACGAA
TCCAAAAGTAACGTTGTCTCGCAACCATCATCTGACGACGTCAAAATGGA
TGACATCAAACCTGATAATAATTCCGAATCAAAAAACGGTCCTAAAACGG
AATCGCCGTCGACAAGCGAAACTGTTCCCATGGAAATTGACAATTCTACG
ACGccgaaaaaagaaaatgaaggagTGAAGATGGAAAAAGAAGCGAAGCC
TTCAGTTAAATctgaagaaacaaaaaatgttgacaTTCCGACGCCGGTCA
AAGACGAGAAACCGGTCATGCCCATAACCGTAGTTCCTTCCGTATCGACA
TTAGTCCAATCCGGACACTCGATCACGATTATTAAATCATCAGATAAAAA
TGATACCAAACACTTACTCGATTCCAAAGACCCGAAAAGTAAGATGATGC
CGACCCCGGGTGGTGCTTCTAATATTCAAGTTATGAGGGCGGCGCCCACC
ACAAATTTGAATTATGGACAAGCCCTTGCTCAACAAGCACCACCGCCCAG
CATTGTTGTTGTCAAATCTGAGGAAGAAAGACAACGTCAAGGGAGCACCA
AGATAATTCATCACGCCGACCCTGCTGAGCAATTAAACGAACTTTTTAAT
GGGCGTCCTGTCGCTCAACCTCAGGGTCACCCGCCCTTCAACACCGCCCT
CGGAGGGAGTATAAATCCACAAAAATTTCCTGACGGAATGAACACTGGTC
TAAGTAAGCAACAACAATTAATTCTTGTACatcaacaacagcaacaaaaa
caacaacaacttcaaaataaacaattaccaCAACAAAATATACCTCTCAC
TCAACAATCTTCAGCATCACATCCAACATTGACGACAgcactttcaacaa
attttcttCCAGCAACGTCTATGGTCAACTTGCCTCTGCCGAAACCGACT
TTGAGTAGTAAACCGTCACTCGAAATCAAACCGAACACTTATAATTTGTT
GAACAACCCAACAACTAAAGTAATGGGTTACGGTGAGGAATTTTTCAATA
AACCGCTAGCAGGGACGGGATCGGTAGAGTCACGGCAACCGTTGAAACAA
GAGGAGCGTGTTGACGATTCCGACGACGAAGGTGCAGCCACGACCGATTT
AGTTTTATCTGCTGTTCATCGAGTATAcccacaaaaagaaaaagatcttC
AATCGACCGCCGAGCCCGCTGTTTTAGACGCTCGCCCGTTCAAAGTGAAC
ACGGTGCTAACGACTCTCGCATCCGTTGCTACAGTCCCTACGGCCACTTT
TGGCGCCGGCACCCTATCTGGCCTCATCGGAGCTAGACCTCAACAAGGAT
TCGAAAACGCGttactttttaaagattttgcaaGTAAAGTTGCGAACGAG
GGAGCGAATTTAGGagctaatttgaatttttaccaGGGGAAATATCCATT
AGTGATTTCCGATCATCAGAAAACAGTTTCTCCTCAGATTTTACGACCGA
TAACAGACTCGAACGGGCAATCGTTGACCATTCTACCATCGATTATCGGA
AGCTCGAACAGTGAACTCAAGTCTAATGTGTTAAATATTAACTCAAGCGC
ACCCAGTGGAGCCTCTAGCATTCCTAGCGGCGCTGGCGGAGCGGCAGAAT
CAGCCAAGACGTCTCTTTTACACCAACGTTTAATGTTGAATGAAGATACT
AGCGCTGCTGCATCCAATAAGAACTTTATTCCACCCTCTAATGTGAAACC
AAATAATGGCGCCCACCCTTCACAGTACGGTTTACCAACACAAAAACAAG
ACATGTCATCTGCTGCCTCTGAATACCGTTTATCAAACGATAAAGTTTCA
GTAACTACATCAATGACTCTAACACGTATGCCCGAAAAAATGAAAGTAGG
TCTGCCCGGACAAGGAGGATTACGGATTAATCCACCACCGGACGAAAGAG
GGCCACCTTCTCGGAGCCAACACCCAGATAATCTGAAGGAAGCAATGCTA
CAGCCTAAAGAACTATCCGGTAGTTCGCAATATCGACAGTTGCCAATCAC
GAAGAGCTTAGCTCGAGGTGAAATGCCAAACGCTCTTTTCGCGGCCGCTG
CTGGTGTTCCGCCCTCCAGCTTAGGGGCAGTCGCATCTTCGCCCTCTGTG
GCAGGAGGTATTGATAACCGACGCAAAATGCTGATGAATCGAACTACTTC
GACCATCCCCATAGCGCCTGCACCGCCTTCAACGACGTCGATGAGCCGAG
CCACTGACCCTTCGGTTATCGGGTCTGGAGAATACGCAGGTCCAGAAGGA
AATCGCGAAAATTACATGCATCGTTTTACACTGACAAGCGATAAGCGACT
CGTTTCAAGCCCGGCAGAAAATCGGGGACGCCCGAAGAAAATCCGGGTTG
AAAAGACGGAAACGATACCTATCGGAACAGCACAAGAGATGGCACGCTCG
CGCGGTGCTATGGAAAGTCCATCCGCGCGCTCTCGAGCGTCCGAAAGTCC
GATCGGTCGTAAAGTGACAAGCCCTGTTGTTCGGGCGAGCGTGATTCAAG
GACAATTGCACCCAGTTGTCGGTCAAACTTCCATAGCGGATCATACTTCG
CCGCCCAAAAATGATCATCATTTGTTCCAACTTTCAAGAGGCGGAGGCGA
GCATGGTGGTCCAGTAATGGATGAACGTGCAAGGTTCGGACAACCTGCTA
AAATGTCCACCATGGACGCACGTGCCATTCCTGGTTCCATTACAGAAAAG
AATATAAAATCACCGCCTGGTATGGGATCGTACTACAATCAACCGCCCAA
CCAGCGCCAACGTATACTTTCCCCGCCCACTTCACGAAGTCCCGCCATCT
CACCGCGTGTTTCCAACGAGAGCATACCGAGGTCACCGTCTCCTGGGATC
TTCTCTCATGAACATGGGAAACCGTATCATCCTTACCCAGTCGAAAATCG
CGAGAAGTACGGATTCGGTCACCCTGGCGGGCCGCCTGGCGAGCACGCAA
GGATAAGTGAACAAATAAGAAAACAAGAACTCCATCGCTCCGTATCAGAC
CAAGGGCGTGTTATCGCTGACCCACGTAAATCAGTCCTTTCGCCTCGTGA
AGGAATCAGCATCAACCCGCCGTTCAATCGACAATTACACGAAGATTACG
CTAACTTCACTCGACATCAGTCACCGCGTGCTGAAATGGCTCCCCGAGAT
ATCCCGCCGCGGCCGTCTTCAATGTACGAACATCGTTCCCTTGAAGATTC
AGCTGAACAAGCTAGAATTTTAGCTTCGACACGGGATCGTTTCATGATGG
CGCCAGGATTGAGCTCTCAACAACCTCTTTATAATGTAGGACGCTCTGGG
ACGCCGCCCTCCTCTGGCGCCCCAACGCCATCGTCTCATCATTCTTCAAA
TTTAGTATTGGGGCGGGCCGATGGATCAATATTATCTAAAAACTTGAATT
ACGAACCTTCAGCCCGACCGGGTGAACAAAAAAGATAACGCAtccaattt
tttataatttccttttttttttgcaatttttgatattcttcttttgttta
atCATCTTCGTAtggaaaaaagagattttttaatCCGTTGGACATTTCtg
ctttcgatttctcaaagaATTCTTAAAATCAAAAGTAAGCATGCGTTAAA
AACATGATGGTATGAAATTATACCCAATTGTCTTGCCGTTATTTTTGAAT
GGCAAACTTTAGTCTCATTCTTTTATGTATTATTATTAGCATTATTTCTT
GTTTATCCTTTATTTAGCTATAGATATGACATTAGAACATATTCCTTAGG
TATTTGTTAGAAC
Run BLAST on NCBI

transcript from alignment at sc0000406:53237..64243-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022165 ID=TCONS_00022165|Name=TCONS_00022165|organism=Clytia hemisphaerica|type=transcript|length=11007bp|location=Sequence derived from alignment at sc0000406:53237..64243- (Clytia hemisphaerica)
GTGCTAATGGAAAGTGTTATCTTGACATCAATATAAATGGACATTATTTG
GTAAAACTATCACTTTTTCACTCACGCGCCTTTTATTACAAAACTTACGT
ATGATTCAACATAAGCTATATATTGAGTTTAAAAAGCAATTTTCACTTTG
TATTTGGTTCTCCCAAATTTGTGTTATAATTTTCGTCTTTTTCTTTTTGC
AGGACGATACACCCTTGACTCAGAAATCAGAAATCAATATTGAAATACGC
AGAGATAATTTCCTTTATTAAAATAATGAAACTGGAGTGACACATCATCT
CATGATGTCATCCAAAGGCAAGAACGTACCTGACCCAAAAGTCGGTAAAA
ACTCTACACAATCCAGAAAGAAAAATCCCCGTCGCAGCCAACGCCATCTA
AGCAACGGTGACCCAGTGGACGATTCCAAAGAACGTGCGTCCAAGCGCGG
CCGTGACTCAAACAAAGATTTTGATGGCAATTATGAAGCAGAATTCCCTC
AAGAGTTGTATAAGGTAAGAAGGATTTGGTTTTAGACCGACTGGCGGGTT
TTATTTTAGAACTTCGAGGTCTCGATTAGTTTCGCGGTCACCAATTGAAT
TAAGTCAGTTATCATATATAAGTCAGCTATCATATATAAGTGAGCATTCC
AATAGACCTTTTCATGAATTAATTTGACTACAATGACTGTCTCATTTTGA
AACCATTACCAAGGTAATTAAATCCCTTGAATCTCCAAGTGTTACTTTAA
TGAATAGGGTAAATTCCCTATGAACTCCTCTGGGAATCAATTACCATGAC
GATATTTTGAAAACGAGGTAAGCGTTGCTCGTAACGTAATTAATGAAAAG
GTCGATTTTGCGAATACGGTAAACTGGGATTTGACCGATATTCTGTTCTG
GTATTTGAAATTATTAATGAAATTAAAATATTAACTTAATAACATGATAG
CACGTTCAATCCCCATAGGTGTACGCAAATCCAGCGAGATACCCTGCAAA
ATTTATGGATGAGAGCGCTTTTTACGACACTGTAATTATTATCTTTGTTT
CATCAAAAAATAATGAATATGTCATAAACATCTGCACTCCCTCATAAATT
TTGCAGGGTATCTCGCTTCGCCTATGATCCCAGAATAACGCTGTGTCATA
TACATAGCTGGATTGATAGTTTTTGAAATAACTGATTCCAGAATTAGTAT
TAAAAAACTGTGTTGAAAATGATGCACTGCGTGTGATGATGTAGAGCATT
AATTAATTTTTCGCATACGGTTTGCTTATGCGTGCGTTTTATTTCTCTTT
AATTGTCATGGCATCATTACTGAAAGAATGTTTTTGGTCATTTTCTCTCT
TTTTTCGTAATTTGACGATCTGATCTCCATTTGATATTGGTTCACAAGAA
TCGTATATGCTTACCCTTACCGTCTTTTATAACTATTGCGAGTACTAATG
TTGTTAAGGCCGTCGTCGAAATGTGTTTAAACTTTCTCAGTGTGCTGTTC
AAATCTTCGTGGTTGAATCTGTGACCTTGTCTGGTTATTCTATCAAATGT
CTGCCAAATGATACTGTTCTTATAAAAACGATCTTCTAAAAAACCGCTTC
CCTTTTTAATAATTATTCTTTATCCTTTCAACAGTTTTCTCTCTCTCTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGG
GGGGTTGGAAAAAATCGAAAAATTAACAAGCGGGGGGGCCCGTTTATTTG
GCACCTAAGAGTAAGGTTTGTTTTATATAACTCGTTCTGCGTTGTATGTA
GCTCTTACACATTGCTGTTAACATAGCGCGACCTTTCATGCTGTTTCATT
TCCATGGTAACACGAGTTGTTTATTATTTTGCATGCATACCAAGATCATT
GTACACGTCATAAAAAAAGAGTTTGATTTGAATTTGATTTTCAAATCACT
CTTATGGCATGACCGCGATGAAAAACCAATTTTGTTGGCTTTTTTATCAA
AATATTTGTATAGGTCGATATGCATAAATTAACTTCCTTTGCATAATTAA
ACAAATGATCTCGCATACATTATAACTAATACAAACATTTCTTGCATAAT
TAGGACAAGTTTTTTTTGTGTTGTTTTTTTTCGATGACATTCTCGAGATA
TTTGCCCTCATAGTGCTTACGCCTGCGTTTTGAATTTCGAATATTAATAA
AGTACACTGTAAAAAACTTTCTTTATAACACTCTCAAATTACAAATTTTT
TTCCTCTCTCTTGAAAGATCTTTTATCGCATCATGCTGTCAAAATAAAAT
AAAAAGAAATCTAAGGCATTTTTCAGACGTTTTTTTATAAGAACATTCAT
AATTTTTGAAGCCTTCGAATGTTCTCGCTGTCATCAAGGCAAAAGGTCCA
ATCTCAAAATTAGTGTCTGAAAAAACTAAGAATTTTTCTGTTTTGCTAAC
TTTAAATTTTGAGATTGACCCTTTTTCATGTAGATGGGATCCCCCTCACT
ATGAAAAAGGGCTAAGCTCAAGATTTAAGGTTAGCCAAACAGAAAAATTC
GCAGTTTTCTCAGACACTAATTTTGAGATTGGACCTTTTGCCTTGATGGT
AACGTTCTTAACTTTTTGAGTTTTAAATTTTAGAATGTTCTTAACATGTT
CTTATTTTCACAGAGTGTGATCGACCTTGTTCCGAGTACTGAATATAACT
GTGAACCAACTGAAAAACCAGCACCTCCTGGCACTCAAGTCAACCTTCAT
GGTGTCATTCTCCACGAAACTCAAGACGGTAAGATATAATTTTTGTTTTT
TTGGTTATAGCGGTGTTCTACAGTATATTTTTCTAGCCTTTGGATGTTGT
TAATTTTTTTAAATGTTCTTAGCATGTTCTTATTTTCATCGTTTTTATTC
AATAAAATTGATTTTGGTTGTAAATTTTTATTTTCATTGCTTTACAGATT
GCGAAATTTTCTAAATTTTGGTACCTTAAGAGAAGAAATTTTGACGAGAA
GAAATTTTGGCGAATGAACCCATTCGCAATTTTTTGGTGCAATTTTGCGG
AATTTATTTTGGCGATGTAATAAAATTTTTAAATTTGGCGACAATTAATT
TTGGCGAACGACCAATTTTTGTTCAATGTTTTAGCTGAAAAAAAAAAGGA
AAAAAGGGTTTTTAGGAGTAATAGAGACTAAATTGCAAGAAAATTAAATT
TGGCGAGAATCTATTTTGGCGAATGACCTATAAATTTTAAATTTCTTTCC
GCCAAAATTTCTTCCCTTAAGGTAGTTTTTTCAAGATTTTGAGAATTTTA
TGGTCAATTTTTTATTTTATCCATGAATTCGAGGTTTTTGTCTCTTTTAT
ATTTTATTTTGCATTTTTGTCAATATGTAGTTTTTGCTGCCTTTTTAGGA
GATTTTATAGGTGAAAGTCTACTTTTATTTTTATTTTTTCGTTGACCGAC
CGACCCTCTTTTTTGGGTAGCTTGGCCCGTAAAACAACAAATTAAATTGG
CCTCGCCCAGTATGCTTTGTTATAAGAAGGAAATAAACCCTCTTTTTGGT
GACTACTATTTTACACTTATTTTATCCCTGTCATGAAGTTAAATGCAGCT
GGNTTGGGTAGCTTGGCCCGTAAAACAACAAATTAAATTGGCCTCGCCCA
GTATGCTTTGTTATAAGAAGGAAATAAACCCTCTTTTTGGTGACTGCTAT
TTTACACTTATTTTATCCCTGTCATGAAGTTAAATGCAGCTGAAATTACC
AAATACATTTAAGAGTGAGTGGTTTTGTCATTTATGTGAGCTCTTATTCT
TTTCTTCTTATGCTATAGCCTACAATGGTCAATGTTCTTCATTGGATAAG
GATGGTTCGTTCCATGGTTTGGCATGGTTTCTATTTAATAGTACCCTCCT
TTCTCTTCAGGGCTTCTTGTGCTAAATGTTCGTTGGAGAAACCAGGTCTT
CTCTGGTGCTTTGATCGATGTTGAGAAAACGAAATGGGCCTCCGAACGGT
AAGTGAATTAGTTTCTTTTTACAACAAAATTGATCAGACTATACTTTGTA
GGATTCTGGAATCAATTTATGAAGGTTTTGCCGCGCGTTTTTTTTCTCTT
GCTATTCGTGAGCTTATTGTAATCTTTGTGGAAGCTTAGGGATATCGTTT
TATAAAATTTCCTTGTCTTACTTTGCTTTAGCGTTTCGGCCGAGGGGAAT
TCGGAGCTTAGTAAGTTCACCTCCACCCAACCACCCATCAAGAAATTACG
CATCCCTACATCCGCCTTACGCCAACAACACGATGATTCTGATTCGTCCG
GAAGTACTAAAAAGAAGGCCGGAACGACCAGCCCTACAACCAGTGGAAAA
AGCAAATCGCGAACCGGAACGAGTAAAAAACGTGGCGTTACCGCTAGTGT
GGAGCCAGTCTCTCCGCCTCCAGATGACCCACAAACAACACCCAAGAAAT
CGAAAGTGAAACCACTTACAAACGGTGATGCGGCCACGGCGACGTTTGAA
TGTCCCGAAACAAACTGCCGTAAACGCTACAAGAATAAGAATGGGTTGGC
GTATCACATGGAAAAAACGCACCCGCCAACGCCCAAGAAGGCGGAAAGTT
ACGAGGAAAAGGTGATTAAAACTGTATTTTTATGCTTTGGTTTATCAGTC
AGTTCTGAATAAACTAGAACTCTAGGGTATGATATTCCTCATAGCCTCCT
CGTGCAAATTGGAAACAATCTCTACTACTTCATTTCCAGGGCACCAAATG
GTTTAGCTAATCCTTTGGAGGCAAATTGTATTTTCATAAAAATAACTTTC
GGTATCTTTTTTCCCTGTACTACAGGACATCAAAAGTGACGATTCAGATA
GCGGAGATGACAATTTTGTGATCGACGAAAAAGCCGGCGACGATGATGAC
GAAGAGGAGGAAAATCCTACGGAAGACGAATCCAAAAGTAACGTTGTCTC
GCAACCATCATCTGACGACGTCAAAATGGATGACATCAAACCTGATAATA
ATTCCGAATCAAAAAACGGTCCTAAAACGGAATCGCCGTCGACAAGCGAA
ACTGTTCCCATGGAAATTGACAATTCTACGACGCCGAAAAAAGAAAATGA
AGGAGTGAAGATGGAAAAAGAAGCGAAGCCTTCAGTTAAATCTGAAGAAA
CAAAAAATGTTGACATTCCGACGCCGGTCAAAGACGAGAAACCGGTCATG
CCCATAACCGTAGTTCCTTCCGTATCGACATTAGTCCAATCCGGACACTC
GATCACGATTATTAAATCATCAGATAAAAATGATACCAAACACTTACTCG
ATTCCAAAGACCCGAAAAGTAAGATGATGCCGACCCCGGGTGGTGCTTCT
AATATTCAAGTTATGAGGGCGGCGCCCACCACAAATTTGAATTATGGACA
AGCCCTTGCTCAACAAGCACCACCGCCCAGCATTGTTGTTGTCAAATCTG
AGGAAGAAAGACAACGTCAAGGGAGCACCAAGATAATTCATCACGCCGAC
CCTGCTGAGCAATTAAACGAACTTTTTAATGGGCGTCCTGTCGCTCAACC
TCAGGGTCACCCGCCCTTCAACACCGCCCTCGGAGGGAGTATAAATCCAC
AAAAATTTCCTGACGGAATGAACACTGGTCTAAGTAAGCAACAACAATTA
ATTCTTGTACATCAACAACAGCAACAAAAACAACAACAACTTCAAAATAA
ACAATTACCACAACAAAATATACCTCTCACTCAACAATCTTCAGCATCAC
ATCCAACATTGACGACAGCACTTTCAACAAATTTTCTTCCAGCAACGTCT
ATGGTCAACTTGCCTCTGCCGAAACCGACTTTGAGTAGTAAACCGTCACT
CGAAATCAAACCGAACACTTATAATTTGTTGAACAACCCAACAACTAAAG
TAATGGGTTACGGTGAGGAATTTTTCAATAAACCGCTAGCAGGGACGGGA
TCGGTAGAGTCACGGCAACCGTTGAAACAAGAGGAGCGTGTTGACGATTC
CGACGACGAAGGTGCAGCCACGACCGATTTAGTTTTATCTGCTGTTCATC
GAGTATACCCACAAAAAGAAAAAGATCTTCAATCGACCGCCGAGCCCGCT
GTTTTAGACGCTCGCCCGTTCAAAGTGAACACGGTGCTAACGACTCTCGC
ATCCGTTGCTACAGTCCCTACGGCCACTTTTGGCGCCGGCACCCTATCTG
GCCTCATCGGAGCTAGACCTCAACAAGGATTCGAAAACGCGTTACTTTTT
AAAGATTTTGCAAGTAAAGTTGCGAACGAGGGAGCGAATTTAGGAGCTAA
TTTGAATTTTTACCAGGGGAAATATCCATTAGTGATTTCCGATCATCAGA
AAACAGTTTCTCCTCAGATTTTACGACCGATAACAGACTCGAACGGGCAA
TCGTTGACCATTCTACCATCGATTATCGGAAGCTCGAACAGTGAACTCAA
GTCTAATGTGTTAAATATTAACTCAAGCGCACCCAGTGGAGCCTCTAGCA
TTCCTAGCGGCGCTGGCGGAGCGGCAGAATCAGCCAAGACGTCTCTTTTA
CACCAACGTTTAATGTTGAATGAAGATACTAGCGCTGCTGCATCCAATAA
GAACTTTATTCCACCCTCTAATGTGAAACCAAATAATGGCGCCCACCCTT
CACAGTACGGTTTACCAACACAAAAACAAGACATGTCATCTGCTGCCTCT
GAATACCGTTTATCAAACGATAAAGTTTCAGTAACTACATCAATGACTCT
AACACGTATGCCCGAAAAAATGAAAGTAGGTCTGCCCGGACAAGGAGGAT
TACGGATTAATCCACCACCGGACGAAAGAGGGCCACCTTCTCGGAGCCAA
CACCCAGATAATCTGAAGGAAGCAATGCTACAGCCTAAAGAACTATCCGG
TAGTTCGCAATATCGACAGTTGCCAATCACGAAGAGCTTAGCTCGAGGTG
AAATGCCAAACGCTCTTTTCGCGGCCGCTGCTGGTGTTCCGCCCTCCAGC
TTAGGGGCAGTCGCATCTTCGCCCTCTGTGGCAGGAGGTATTGATAACCG
ACGCAAAATGCTGATGAATCGAACTACTTCGACCATCCCCATAGCGCCTG
CACCGCCTTCAACGACGTCGATGAGCCGAGCCACTGACCCTTCGGTTATC
GGGTCTGGAGAATACGCAGGTCCAGAAGGTAATGGTTTTTTCTACTTTTT
CAAACAAACTACATAATCTATGGTGATCTACGTTGTATCTGTGTTTAAAA
ATTCCTGTTTGGTTTATGGCTGTATCCACAAGAATAATGTAAGGATAATA
TATTTTGCGACAACATATAGTTTATGATTCATTTTGAGAATGTATACCTT
ATCGGCCCTTTTTACGCCGGCCCTAATTTAACGCCGGTCCCTTTATGCTG
CCCCATATTACGCCACGAGCCCAAAAATAACGCCAACAAGGGCAGGTGTA
AAAAGGGCTGATAAGGTATTTGAAATTATTAGTTCTAAAGAAATTTTAAT
CAATCCTTCCTTCGCTTTTAAGGAAATCGCGAAAATTACATGCATCGTTT
TACACTGACAAGCGATAAGCGACTCGTTTCAAGCCCGGCAGAAAATCGGG
GACGCCCGAAGAAAATCCGGGTTGAAAAGACGGAAACGATACCTATCGGA
ACAGCACAAGAGATGGCACGCTCGCGCGGTGCTATGGAAAGTCCATCCGC
GCGCTCTCGAGCGTCCGAAAGTCCGATCGGTCGTAAAGTGACAAGCCCTG
TTGTTCGGGCGAGCGTGATTCAAGGACAATTGCACCCAGTTGTCGGTCAA
ACTTCCATAGCGGATCATACTTCGCCGCCCAAAAATGATCATCATTTGTT
CCAACTTTCAAGGTTAGTTTTAATCTTTATTTTCAATTTATGTGAACAAC
GAAAATTCTCCAGGACAGGAAAAATTTGTCAGAAAAAGTTTTTATCGCAT
TGTGGATTGCCTAAAGAGATTTTATTCAATAAAACATGATAGAAGTACAT
TTTTAAAGAAAAATTTGAAATCCGAACGCCGTAAAAACAATGTCTAGGAG
TGATTTTTCAAAACAGGTTTGAGACGAACTGAACCTTGATTTTACGTAGT
TATTATTATTATTCGTGATATTCACGACGTAAGGTTTTATACGGAAGCAC
CCGAAACCAACGTGTGTTGGCCACTCATTTTGCATTAAAAAAAACTAGTG
ACAAACGCCCGGGTTATTTTGGGTGCTTCCGTACGAAACATTACGTCATG
ATTATCATTTATTTATTAAAAAAAATTATTAATTAAACTTTTATTCAGAG
GCGGAGGCGAGCATGGTGGTCCAGTAATGGATGAACGTGCAAGGTTCGGA
CAACCTGCTAAAATGTCCACCATGGACGCACGTGCCATTCCTGGTTCCAT
TACAGAAAAGGTACCTTCCTTTTTTTGGATATTTTCTCTTGAACCATTAC
TTAAGTTTGATTTTAAATTCCTCATTTCCAAGGAGTTTTGTTGCAATTTT
AGCGGCAGACACCAAAAACGCGAAAAAAGGGTAGACTCTTCTCCAGATAC
ATAAATTTAAGGTTGTACTATTCTTAACGAATACCATACGTCAAACTCGA
ACCCAGTCCCTTAGTTCGCTTTTTTAAGATTCTGATAGCGCTCACCTAAG
TGGTGCAAGTGGCTCTGGATACCAGATTTACCAGATTGGCCATAGCTCTG
TATTCAAATCGAATCGACGAATCCGATAAGTATGCAATTAATTCATGTCA
CTTTATTAAGGCAACTGTTACTTTTTGTTTCTCGTCTTTTACAGAATATA
AAATCACCGCCTGGTATGGGATCGTACTACAATCAACCGCCCAACCAGCG
CCAACGTATACTTTCCCCGCCCACTTCACGAAGTCCCGCCATCTCACCGC
GTGTTTCCAACGAGAGCATACCGAGGTCACCGTCTCCTGGGATCTTCTCT
CATGAACATGGGAAACCGTATCATCCTTACCCAGTCGAAAATCGCGAGAA
GTACGGATTCGGTCACCCTGGCGGGCCGCCTGGCGAGCACGCAAGGATAA
GTGAACAAATAAGAAAACAAGAACTCCATCGCTCCGTATCAGACCAAGGG
CGTGTTATCGCTGACCCACGTAAATCAGTCCTTTCGCCTCGTGAAGGAAT
CAGCATCAACCCGCCGTTCAATCGACAATTACACGAAGATTACGCTAACT
TCACTCGACATCAGTCACCGCGTGCTGAAATGGCTCCCCGAGATATCCCG
CCGCGGCCGTCTTCAATGTACGAACATCGTTCCCTTGAAGATTCAGCTGA
ACAAGCTAGAATTTTAGCTTCGACACGGGATCGTTTCATGATGGCGCCAG
GATTGAGCTCTCAACAACCTCTTTATAATGTAGGACGCTCTGGGACGCCG
CCCTCCTCTGGCGCCCCAACGCCATCGTCTCATCATTCTTCAAATTTAGT
ATTGGGGCGGGCCGATGGATCAATATTATCTAAAAACTTGAATTACGAAC
CTTCAGCCCGACCGGGTGAACAAAAAAGATAACGCATCCAATTTTTTATA
ATTTCCTTTTTTTTTTGCAATTTTTGATATTCTTCTTTTGTTTAATCATC
TTCGTATGGAAAAAAGAGATTTTTTAATCCGTTGGACATTTCTGCTTTCG
ATTTCTCAAAGAATTCTTAAAATCAAAAGTAAGCATGCGTTAAAAACATG
ATGGTATGAAATTATACCCAATTGTCTTGCCGTTATTTTTGAATGGCAAA
CTTTAGTCTCATTCTTTTATGTATTATTATTAGCATTATTTCTTGTTTAT
CCTTTATTTAGCTATAGATATGACATTAGAACATATTCCTTAGGTATTTG
TTAGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012430XLOC_012430Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022165-exon-sc0000406-1575043694:64194..64243TCONS_00022165-exon-sc0000406-1575043694:64194..64243Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:63730..64041TCONS_00022165-exon-sc0000406-1575043694:63730..64041Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:60316..60430TCONS_00022165-exon-sc0000406-1575043694:60316..60430Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:59096..59183TCONS_00022165-exon-sc0000406-1575043694:59096..59183Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:58483..58912TCONS_00022165-exon-sc0000406-1575043694:58483..58912Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:55916..58268TCONS_00022165-exon-sc0000406-1575043694:55916..58268Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:55232..55571TCONS_00022165-exon-sc0000406-1575043694:55232..55571Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:54684..54795TCONS_00022165-exon-sc0000406-1575043694:54684..54795Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1575043694:53237..54299TCONS_00022165-exon-sc0000406-1575043694:53237..54299Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:64194..64243TCONS_00022165-exon-sc0000406-1510915933:64194..64243Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:63730..64041TCONS_00022165-exon-sc0000406-1510915933:63730..64041Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:60316..60430TCONS_00022165-exon-sc0000406-1510915933:60316..60430Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:59096..59183TCONS_00022165-exon-sc0000406-1510915933:59096..59183Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:58483..58912TCONS_00022165-exon-sc0000406-1510915933:58483..58912Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:55916..58268TCONS_00022165-exon-sc0000406-1510915933:55916..58268Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:55232..55571TCONS_00022165-exon-sc0000406-1510915933:55232..55571Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:54684..54795TCONS_00022165-exon-sc0000406-1510915933:54684..54795Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1510915933:53237..54299TCONS_00022165-exon-sc0000406-1510915933:53237..54299Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:64194..64243TCONS_00022165-exon-sc0000406-1491911889:64194..64243Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:63730..64041TCONS_00022165-exon-sc0000406-1491911889:63730..64041Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:60316..60430TCONS_00022165-exon-sc0000406-1491911889:60316..60430Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:59096..59183TCONS_00022165-exon-sc0000406-1491911889:59096..59183Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:58483..58912TCONS_00022165-exon-sc0000406-1491911889:58483..58912Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:55916..58268TCONS_00022165-exon-sc0000406-1491911889:55916..58268Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:55232..55571TCONS_00022165-exon-sc0000406-1491911889:55232..55571Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:54684..54795TCONS_00022165-exon-sc0000406-1491911889:54684..54795Clytia hemisphaericaexon
TCONS_00022165-exon-sc0000406-1491911889:53237..54299TCONS_00022165-exon-sc0000406-1491911889:53237..54299Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:53237..64243 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.9994	13.5851	7.0215	5.40436	16.4379	12.4939	13.9561	16.5338	4.35213	9.74723	5.01235	3.96	7.11048	5.41252	5.8891	10.0477	10.7413	7.66619	5.8183	6.93641	3.09189	3.17621	17.2362	16.2423	9.59638	10.4199	12.1304	10.0009	19.4265	22.4907
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top