TCONS_00022160 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022160
Unique NameTCONS_00022160
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2686

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022160 ID=TCONS_00022160|Name=TCONS_00022160|organism=Clytia hemisphaerica|type=transcript|length=2686bp
ttttagaaaaagaattaaacaaaacaaaataaatataaacaaaatggcag
agGAAGCAAACAAATTATTATATTATGGCTGATGCGAGGTATTCATGCAG
ACGTTGCAGATGTGTTTTGTTTGAGAATGTCCATTTGGTTGGTGGTCACC
ACATCTCGACTGATTGCACGCTCTACTTGTTAGATTATACAAACCTGCCA
TTATGGATACAACAGGCTGTCGAAAAGGGTTATTGGACGAAAGGAAAACT
ACACTGTCCCGAATGTGAGTCACGAATTGGAGCATTCAACTTTGTCAATC
TCATCACATGTGGATGTAACCAAGATGTTTCACCGGCTGTTTATTTCGTC
AGAAGCAAGTTGGACGAGAAGATCCCACATACAATTTACGAACAAAGTTT
TGAACTCTCACAAAGTTTCTCCACTATTGCATGTGAAGATTTGGTCGAAG
ATGATAATGGCAATGGTAGCAACTTAATGAACGACGAGAAGCCAACATct
ccaacaaaaacaaaagaactttCAACAGCAACATCATCAACAATCCAACG
AAGGAATAGGTGTtcaacaatctttgaaaatcaaacttttaaCCCACAAA
TTCTTCCTATATACCCAgagGTTTATGACGATGAGGAGTTTAGCAGTTCC
ATTGTTCAACGAACCGAAGAAAACAGCCCATACGATGAAGTGCTCCTCAC
GCAAAATAATCATTGTAAAAATTGTCGGTCATTGGATGAACAATTATTGA
ATAAGTCAACCAGTGGTTCGTCGAGTCATTTGTATTATGAAGTGAATGGG
CGTCAGACGAGATCTTCAATTACTATCTATGATAGTGGCAGGGGCGTGGA
CGATAGTGGTGGTGGTCATCAAAGCAGGGCGTGTGGAAATTGCCGGACTC
CAGACAAAATTATGAAAAGAGTGACATCAGATGATACAATGACGCAAAGC
TTCAAGGAGGAAGAAGAGCTGGACGACCAACATCAATGTCCGGTATGTTT
AGATATCTTTTACGAACCACACCAAACGAAATGTCTTCATCTTTTCTGTG
CACCATGTCTTCGTCAACTCTACAAATCATCCAATAAGAAACCACTATGT
CCGCTGTGCAGATGCCGTATTTATCAAGTAGAACACCTGAAAGaatttga
ggaaaatatCAAGAAGCTTTACCCTTTGAAACACCAGGATAGGCTAGCAT
CAGAGCGTACACGACCCATCAACCGTCAACCATTACCAAACCCTCTGAAC
GTTCGTTtctcagccaatcagaatgAAGGACAAGATGGTGGCGGACAAAA
TAATGTCGGCATCCGTAACTTTTTCCAAGTTGCAAGATACAGTTTACTGA
TCTTAGTCATGGTTCTGACTTATCTTTTCGGAACGGTTTATAATCTGGTT
AGAAGTTTATTAAAAGAGATTTCGTATCTCTTGATAGCGTTCTTCTTGAT
GAAAATTCTCTCCTTGATCGCCCCTGGTGGATCCATCACTTACATCTCCA
TGCGTTGTCTGCAATTTTACGTCCTATACCGAGTTGTGACGTCACTAAAA
ACAAGGTTACCATGGAGACGTTGGAGGCTACGAGCGAATTTTAGGATTGG
TAGaattttttgaaggaaaatcatGATGATTATGATGATGACGTGGATGT
CGATGGAGTTTTGGATTCGATTCGACACAACTCTTACCATAGTTTTCGAG
CATAAGCGCTTCTATATAAAAGTGTTGTTGGCATCATTAACGACAACTTC
GTGCTTTTAATAGTTGTATGGCCTATATGGATTGGGTCGATTCTCTCCTA
CAGATGTAAACCGCCACCCAATGCCTGTTTAAACAAAAGATTGCTTAAta
ttctctgcactgtaagggtctatATAAGCGAAAAGTAGTCCCGAGGGGGA
GGAGGGGCACTCGATTAAAAACGGCCTATATTGGTCTATACTCGGcacct
ttttgcttttttacatCTTAGAATTGGCAGTTTTAgaccaaaaagaaaga
aaatacccgaaaaaaattcgtgctcgcttcgctcTCTTAAATTTTAGAAG
CATATTGACTTTTtatagggggcgccaaaattaaaaaaaaatctaagatT
ACCTCCCTATTCTGCCCGAATTTTGGTccacccaccacgctactggttTG
GCGTCAAAAGGGCCGGCGTCAACATGGCTGAAAAAGTAATAGATGATTTT
TTAGTCGTAATCGCATTTTAGAGAAAATATTTGATATCGTTTTATAGATA
GATCTTTTTTAAGTCTTTTATACCATTCTTTATTGCCAAATCGCTTTCAT
TTTTACTTAGGTCAATAATAATATATTTAAGGGTaaatatcaaatataaa
caacttcAAAATATCACCATGGCACGGCAAAATTATTTCTTTAGAGTTTT
ATTGAAATCGGCACGCGATGAAAATTTCATGCTTATTTgctttcaaaaat
tcaatttctttgCTCCATAAGGAtgaatattttttacatttAACCAGTTG
TAGGAATGATggaattttttatctctttttcttatattttgtaCTCTTTT
TTTAACTATGGTTGCTGTTCTGCTCTTTAACACAGTTTGAGGAAGAACGA
CCTCTTTACAAGAGATTTAATTTTTATCAGTCAAAAATTTGTGGCCAata
attttgtcacttttttacCTACAAATAGTTTTTGCC
Run BLAST on NCBI

transcript from alignment at sc0000406:198848..208670+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022160 ID=TCONS_00022160|Name=TCONS_00022160|organism=Clytia hemisphaerica|type=transcript|length=9823bp|location=Sequence derived from alignment at sc0000406:198848..208670+ (Clytia hemisphaerica)
ttttagaaaaagaattaaacaaaacaaaataaatataaacaaaatggcag
agGAAGCAAACAAATTATTATATTATGGCTGATGCGAGGTATTCATGCAG
ACGTTGCAGATGTGTTTTGTTTGAGAATGTCCATTTGGTTGGTGGTCACC
ACATCTCGACTGATTGCACGCTCTACTTGTTAGATTATACAAACCTGCCA
TTATGGATACAACAGGCTGTCGAAAAGGTATGATTTAAATCGTATGTTTT
TATGATTACAACGAGTACCAGTTAAATTTCTCAGCTTTGATTGAtttgtt
gattgattgatttgttgattgattgattgattgattgattgattgattga
ttgattgattgattgattgattgattgattgattgattgattgattggta
cGACTTACATTTTACATTCAGGATTAGAGATACGATTTccaaatataatt
tctatcattttaaaGTTAAACATAATTATTCAAAGGACATTATTTAACGT
ATCTCCTACCATtgtgcttacacagcatttttaaacgaCTTTCTACCTTC
CCACTCGGCgcttttgagaaattctttggTTTATTCTACTTTATCATAAC
AAGAGGGTTCTCCTTTTCTATATCATataaaagaattatttaatCATTTA
GTATGCCTGGCTATTATTTTCTCACTTCCCCAGGGTTATTGGACGAAAGG
AAAACTACACTGTCCCGAATGTGAGTCACGAATTGGAGCATTCAACTTTG
TCAATCTCATCACATGTGGATGTAACCAAGATGTTTCACCGGCTGTTTAT
TTCGTCAGAAGCAAGTTGGACGAGAAGATCCCACATACAATTTACGAACA
AAGTTTTGAACTCTCACAAAGTTTCTCCACTATTGCATGTGAAGATTTGG
TCGAAGATGATAATGGTAAGCTCAAGATTATCTCTAACGTTTTAGTACCT
CGTACACACGAAGGCCTCATAATTCTTATTTgaaaatgggccattccatt
ttatatccatacatgggGGTGTACGAACATTTCTAGagggtaatccgaga
aaaatttctaggagttttttttttcatttttccaagggggtaaaaagtta
ttctaaaatttccacggGGTAAAAGACTAATttcagttcgtccaccctca
ctatAAGGTATGAAAAGGGTACTTTTGCAAATTTCactattttccagggg
gtatcgacacattttcaatattttttttttgacttgaaaagtcCCATATT
TTTCATCCATCCTCACCTGTATGGTTTTTAATGTCGGAACAGCCCAATGC
TTGAAGAAAAGTTTGTTTGGGATAATCTTAAATATCGAACCCAATGTACT
GATACTTCTTTAGCTCCatcaaatcacaaaaaatgatttcaagCTACTTA
AGATTGTAGATAATGTTAGTCTACAGTAGGCTCTCGTAAAGCCCAACTCA
TATTGGAATCTTTTTTCACTAATCAAGCCAATTCTCAGTTCCCTTCAAGT
GGAATCCCTCGTAGAATgctctcaaaaatcgaaattcgagttcgaattag
ctagagttaatttattttttttctcgtaCAAACGAAGGCAATGGTAGCAA
CTTAATGAACGACGAGAAGCCAACATctccaacaaaaacaaaagaacttt
CAACAGCAACATCATCAACAATCCAACGAAGGAATAGGTGTtcaacaatc
tttgaaaatcaaacttttaaCCCACAAATTCTTCCTATATACCCAgaggt
aacttttattttcttgttgtaCGAGCTTCGTGAATTTGATAATCATGTAT
AAAACGGTACATGAAAATGTCTCTATCTAAAGAAGTACTTTAAGATATGT
AAATCGAAAGTcacaacataaaaggggttgcggaacgagcgttctgtttt
cgcaaagcgaagaaatctcaaaatatacAAGAAATCGACTCCATTATTAA
TgtagaattaaaaaaacaaactaataagACCCTTACATTTCACCTAGAAT
TTATTAGTGAGTCATAACAATAATGCCAAAGAAGAAGAGGATGTTGGAAA
ATTAGAAGACAAAAGTCATTTGTGctcgattttgtaatacttGTAGCTAT
AAATAAACCTCCCTGATAATAAAAAGGACAAAGATATCTGTTCAATAATC
TGTTTAAAACATGTGACGTCTCAGGTTCGTTTTTATCGTTTCCTCGGGAC
GTCAAAACGAGACCTTTCCGTGATACTTCAATATACATATCTTAGATTAC
ATCTGTGTAAAAAAAACACAGACTCTTCACGAAatggacaattttttttc
tcataaagCCTACTCAAATACTGCAAAGTATTACACGGCATTGGtTTAGA
GAACCATTCTATGTTAAATCGGAGTAGAGCAATTTATCAATTATTATATC
ATCCTACGAAAAACTTCCCGAAACGGCTAGAGAGAAGtcattttgatata
atatcatCGACTTCTACCGACATGTTTTTTCGGGAACTTTTCATCGATGG
CGGGAGTACATCGAGTAGTAGATTTTCAGATTTAGTCATCTGTTCATCCT
CTAAGGAATtttatttggaatatttttaTAGGTTTATGACGATGAGGAGT
TTAGCAGTTCCATTGTTCAACGAACCGAAGAAAACAGCCCATACGATGAA
GTGCTCCTCACGCAAAATAATCATTGTAAAAATTGTCGGTCATTGGATGA
ACAATTATTGAATAAGTCAACCAGTGGTTCGTCGAGTCATTTGTATTATG
AAGTGAATGGGCGTCAGACGAGATCTTCAATTACTATCTATGATAGTGGC
AGGGGCGTGGACGATAGTGGTGGTGGTCATCAAAGGTATGCCCCATCATT
TACCAAAATTTAGTAAATGCTAAAAGTGAACCAATACTGAGAAATATAGT
GAAGTTATAtgcactgaagaaaatacaaactaGCGGCTAACCATGACAAT
CTGTAACAANTAGTGAAGTTATAtgcactgaagaaaatacaaactaGCGG
CTAACCATGACAATCTGTAACAAAAACCCGATATACATTttggaagaaga
aaataaaaaaaaggaatGCACAAGACACAAAAGGAAGTGATAAGCTGAAG
ACCGAAGTCTGAGAACAGATGCGGTACCTTGAGTAAGCACCTCCTGCCAC
TCAAGAGTCACCTGTCAGCTtaacaagaagaaagaaattaaaacataGGC
ACATAGGCAGTCTGACGAGATCTTAGGGATCTTACTTTGAATTTGTTGTA
ATCTTGTGACTTTGAGGAATTGTGATAGTTGGTGTTCTACCTTTAACCAA
CTTGTCTTTATTACTAGCAGGGCGTGTGGAAATTGCCGGACTCCAGACAA
AATTATGAAAAGAGTGACATCAGATGATACAATGACGCAAAGCTTCAAGG
TGATTTAATCATTTGATTTTCATAATTATCTCATCCCTGATTTCAAGAAA
CGAAAGCGTCTTTCGAAATTATTTCTTTAGGGGGCAATTCGCCGGGGGAT
GAGGATTCTCGGTCTGAAAACACTACTGTATATGCAAACAAAAAGTTAAG
GTCTCTGAAAGTTTTGCCTAAAAAATTCATTGCTCTCACTTTATTGCAGT
GTACTTTCTCTCCTTTCTCTCCTTTCAACATTTACAATGCATTTTGGGAA
GCCTTATTAACGCACCCTTTAGTGCCGCACATACGCTCATCTTTGGTGCC
CTCCCCCCGGGCAATTGTCTAGGAGTTTATTTTATTCGTACTAATTCATT
TTATTAACAGGAGGAAGAAGAGCTGGACGACCAACATCAATGTCCGGTAT
GTTTAGATATCTTTTACGAACCACACCAAACGAAATGTCTTCATCTTTTC
TGTGCACCATGTCTTCGTCAACTCTACAAATCATCCAATAAGAAACCACT
ATGTCCGCTGTGCAGATGCCGTATTTATCAAGTAGAACACCTGAAAGGTA
ACTGCTCTTTTTCTGTTTTAAAGTTTCGCTTCTCTAATATATGCTTAGAC
ttcgttttgttgattttctttgggttcatggaaatttcgaatttttcagc
cggaacattgattcggcttaaaaaattacagttttttgtaatttggcgcc
acaggcgaaaatctttggtttaagaaagttaaaacagctttaaaagtaac
cctaaaaaggtcagcgttttagaaaagctgcacaagtttttttgcatttc
agcttggaggtatgcttagcattatgcttatttttcacCAAGTTTAagcc
taagtatgcttataaacgttatgctccTATATAAAAACGAGTGTATCGTT
TATCATATTAAGCCCACGTAAAACAATATCTTGTCTATGTCTTGCCCTTT
TTACATCGTCCCTAATTTAGTCCCGACCCCTTTTACGCTTGCCCTTATTT
CGCCAACgttcatttttttccttcagATACCCTACGCCTACTGCCCCGAC
TTAAGGGTCGTTGAAAAAAGGGCCGACAATGCATATAGATTGTTTACAAA
TTAGACGAGTTAACTATTCAACAGCCAATATTTTGTTGACGTCGTCTATC
TGAGGGCGAATGAAGATTTGATTGAGTTCATAACTTGATATTTAACTTTA
AAAGTCGgacgttttttaaattttctttttagaatttaaaataaTATCTT
GTCCTTGTCTTGCCCTTTTTATACCAGCCCTAATTTAGCCCCGACCCCTT
TTACACTTGCCCTTATTTCGCCAACGTTCAATTTATTCCATTTTTAGCAT
GGCGCTAATTTAATACCGATACCCTACGCCCTTTAAGGGTTGTTGTAAAA
AGGGATGACAAGGCATATAGATTGTTTCGTAATTAAACGAGTCAACTACC
TTATTGACCTTTTTACGCCtgccttattggcgttatttttaggctcttGG
CGTAATACGGGCTGGCGTTAAAAGGGCTGGTGTAATaagggccaagattt
tgcaaattttacttaaaagtgGCGTTTTCtctatttaaaggattttaggt
gtgattactccatatttaaaacttcccaaaaatcagtgattttcattgga
attttcaacagtttactactgaaaattatattataacgtaaattgaagca
taaatagccattctaacaaatgttggcgttatttacgaccctaattggcg
taagcccaaaattgggctgtggcgtaataagggccNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGGTGAGAGATGCTGTAGTTGCCCAGAGTTCAGAAATGCGT
GAGTTTTGGTGGTATCTTAGCGATAGTTTGTCTTTGAACATCTGCCAGTT
GAAGCCTAAGTGTTTCAGTTGTGACTTGGTATGGATTTCTTTGTGATTGA
GGGACAGTTTAGGGTGTTCGATCGGTGATTTCCCTGAAATGAGAAATTGG
GTTTTTGATATGTTGAATTTAAGTCCGTTCTGAAATCCAAAATCTGTACA
TGTGTCGACCATCTTTTGAAGTTGGCTTAGGGTTGGGCTGAGTAGGATTA
TATCATCCGCGAATACAATGATAGAGGTGTTTATATTTCCAGGTAGGTAG
GTTCCAAGGTTTAGATCCTGTACAATATCAATTAAATCCTCAGTATAAAT
GTTGTAGAGATATGGTGAGAGGAGCGATCCCTGTCGAACTCCTTGTGATA
AATGGAAGGGATGAGAGGTGTTACTCCTATATCTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAGGTTTTTgcttttcag
tttttcaaatAGGAGTAGCCAGTTGCAGCAATCGAAGGCTTTTTCAGCAT
CAAGACTGCATATATATACTGGTGTGTTTTTGGCATTGTAATACGAGATA
GTGTCTCTGATGAGAAGCTCCGCATGGACGGTAGACGCGTCAGATGTAAA
TCCAAATTGAgagtttttgtggtttttcaGTGAGGGACATTTGTTTATGA
TTAGTTTCTCCATGATTTTAGTGAGTATTGGGATCAGGCTGATTCCACGG
TAGTTGTTTGGATCTTGGATTGGTTTTTTGCTTGATTTCATAATTGGGAC
GATGATCGATGTTGATAATGCCGGTGGTAGATCGGTTGTATTGAGAATGT
CGTTGATGAGGGGTGTAATGTAGGATAGCATGTTGGGAGAAATGCTGTGA
ATGAAGTGTTCTGCTTTGATATTGAAAGGATCggaggttttgtttttatt
caaactcATGATTGCTTCTTCAACATCAGTAGCTGATACGTAGAAGTCGG
AGGTTTTGTTCTTTTCAAGGTCTGCTAGCAGCTCATGAAGTTTTTTGTTG
GAAATAGTGTTATTGATGTTTTCAGTTCTGGGTGTGTTCAGAAGGTTATC
AAAGTGGGAACTAAACTCTTGGTTGATATCGTTTACGTCTGATTTGTTGT
TGATGGTGTATAATTTGTCATCCTTTGAATTTTGGAGTCGGATTTGTTTC
CAATATGAACGtggtttgaaagttttaattttctctacATTGATGAAGTG
ATCCGTAGTTGTTTGGTTTTTGCACCTTTTTGATGATGAGCGAAAGTCCT
TCCTTGCAAGAAGATATCGATTATATGAGATGTCTGATGGTTCTCTGGTA
AAGTTACGGTCTCTCCAATCATTAAAGcacttttgtaaatttttcctttt
ctttgtaAGTTCTGTGTTCCACCATTTTGTTGACGTCGTCTATCTGAGGG
CGAATGAAGATTTGATTGAATTCATAACTTGATATTTAACTTTTAAAGTC
GGACGTTTTTCAAACCTTCTTTttagaatttgaggaaaatatCAAGAAGC
TTTACCCTTTGAAACACCAGTAagttgataaaaaattgttaattCATTTT
AGCACAGATTTCTTTACTGAGGTTATATATACACATATCCTTATGTTCAA
AAAACGTTTAATCATCTTATAAAAGTAAAAAcccattcattcatttattc
ttctattttctattcttttttagGGATAGGCTAGCATCAGAGCGTACACG
ACCCATCAACCGTCAACCATTACCAAACCCTCTGAACGTTCGTTtctcag
ccaatcagaatgAAGGACAAGATGGTGGCGGACAAAATAATGTCGGCATC
CGTAACTTTTTCCAAGTTGCAAGATACAGTTTACTGATCTTAGTCATGGT
TCTGACTTATCTTTTCGGAACGGTTTATAATCTGGTTAGAAGTTTATTAA
AAGAGATTTCGTATCTCTTGATAGCGTTCTTCTTGATGAAAATTCTCTCC
TTGATCGCCCCTGGTGGATCCATCACTTACATCTCCATGCGTTGTCTGCA
ATTTTACGTCCTATACCGAGTTGTGACGTCACTAAAAACAAGGTTACCAT
GGAGACGTTGGAGGCTACGAGCGAATTTTAGGATTGGTAGaattttttga
aggaaaatcatGATGATTATGATGATGACGTGGATGTCGATGGAGTTTTG
GATTCGATTCGACACAACTCTTACCATAGTTTTCGAGCATAAGCGCTTCT
ATATAAAAGTGTTGTTGGCATCATTAACGACAACTTCGTGCTTTTAATAG
TTGTATGGCCTATATGGATTGGGTCGATTCTCTCCTACAGATGTAAACCG
CCACCCAATGCCTGTTTAAACAAAAGATTGCTTAAtattctctgcactgt
aagggtctatATAAGCGAAAAGTAGTCCCGAGGGGGAGGAGGGGCACTCG
ATTAAAAACGGCCTATATTGGTCTATACTCGGcacctttttgctttttta
catCTTAGAATTGGCAGTTTTAgaccaaaaagaaagaaaatacccgaaaa
aaattcgtgctcgcttcgctcTCTTAAATTTTAGAAGCATATTGACTTTT
tatagggggcgccaaaattaaaaaaaaatctaagatTACCTCCCTATTCT
GCCCGAATTTTGGTccacccaccacgctactggttTGGCGTCAAAAGGGC
CGGCGTCAACATGGCTGAAAAAGTAATAGATGATTTTTTAGTCGTAATCG
CATTTTAGAGAAAATATTTGATATCGTTTTATAGATAGATCTTTTTTAAG
TCTTTTATACCATTCTTTATTGCCAAATCGCTTTCATTTTTACTTAGGTC
AATAATAATATATTTAAGGGTaaatatcaaatataaacaacttcAAAATA
TCACCATGGCACGGCAAAATTATTTCTTTAGAGTTTTATTGAAATCGGCA
CGCGATGAAAATTTCATGCTTATTTgctttcaaaaattcaatttctttgC
TCCATAAGGAtgaatattttttacatttAACCAGTTGTAGGAATGATgga
attttttatctctttttcttatattttgtaCTCTTTTTTTAACTATGGTT
GCTGTTCTGCTCTTTAACACAGTTTGAGGAAGAACGACCTCTTTACAAGA
GATTTAATTTTTATCAGTCAAAAATTTGTGGCCAataattttgtcacttt
tttacCTACAAATAGTTTTTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012428XLOC_012428Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022160-exon-sc0000406-1491911889:198848..199074TCONS_00022160-exon-sc0000406-1491911889:198848..199074Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:198848..199074TCONS_00022160-exon-sc0000406-1510915933:198848..199074Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:198848..199074TCONS_00022160-exon-sc0000406-1575043694:198848..199074Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:199531..199762TCONS_00022160-exon-sc0000406-1491911889:199531..199762Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:199531..199762TCONS_00022160-exon-sc0000406-1510915933:199531..199762Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:199531..199762TCONS_00022160-exon-sc0000406-1575043694:199531..199762Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:200435..200595TCONS_00022160-exon-sc0000406-1491911889:200435..200595Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:200435..200595TCONS_00022160-exon-sc0000406-1510915933:200435..200595Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:200435..200595TCONS_00022160-exon-sc0000406-1575043694:200435..200595Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:201429..201682TCONS_00022160-exon-sc0000406-1491911889:201429..201682Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:201429..201682TCONS_00022160-exon-sc0000406-1510915933:201429..201682Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:201429..201682TCONS_00022160-exon-sc0000406-1575043694:201429..201682Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:202165..202246TCONS_00022160-exon-sc0000406-1491911889:202165..202246Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:202165..202246TCONS_00022160-exon-sc0000406-1510915933:202165..202246Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:202165..202246TCONS_00022160-exon-sc0000406-1575043694:202165..202246Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:202608..202794TCONS_00022160-exon-sc0000406-1491911889:202608..202794Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:202608..202794TCONS_00022160-exon-sc0000406-1510915933:202608..202794Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:202608..202794TCONS_00022160-exon-sc0000406-1575043694:202608..202794Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:206974..207016TCONS_00022160-exon-sc0000406-1491911889:206974..207016Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:206974..207016TCONS_00022160-exon-sc0000406-1510915933:206974..207016Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:206974..207016TCONS_00022160-exon-sc0000406-1575043694:206974..207016Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1491911889:207171..208670TCONS_00022160-exon-sc0000406-1491911889:207171..208670Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1510915933:207171..208670TCONS_00022160-exon-sc0000406-1510915933:207171..208670Clytia hemisphaericaexon
TCONS_00022160-exon-sc0000406-1575043694:207171..208670TCONS_00022160-exon-sc0000406-1575043694:207171..208670Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:198848..208670 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.8617	0.00739591	1.47723	1.71795	7.40909	3.58107	4.00944	5.43289	0.270991	0.043142	2.89836	0.766069	0.757449	0.000612368	8.55432e-05	0.0317642	0.667053	3.90743	0	4.62428e-06	4.58821	0.609482	2.18585	1.64698	4.4035	4.01119	6.33453	5.97701	7.09895	3.10272
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022160 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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