TCONS_00022095 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022095
Unique NameTCONS_00022095
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022095 ID=TCONS_00022095|Name=TCONS_00022095|organism=Clytia hemisphaerica|type=transcript|length=2180bp
GCGCATATGTCGCAATTTCCAGACTGGCGGCTAGCAAAAGGTCTTGTGGA
AATGCGTGACTTTCAAGGTCAATGCGAAAGAGTTGCCACCATCTCTCTCT
GTTCTgaaattcattcaaaaaaaaaaatttaaaacaagaaaaatcttaac
TCTAACTGTAAATATAACGCCTAGCTATTTGAAATTTACCTGCTGGGGCA
TGTCCTGCCAAAGTTGGTTCACTCTTTGGGCTGGACATGTTTGTTTAGAT
GATATGGTCTTGCTGAATTCTTCGATTTTGCACTCTCTAGTTCTTCACTT
TTCCCTTGATTTTGCTAGCGTTGGGATTTTCCACACGTTGCCTTTCCTCC
TCGCTTACCTATCAAATAGCTAATTCGTCTAGAGTTCTCCGACGGCTGTA
TCAAAGATAGTTACTCCCAGTATTTCGGCTGAGTAAGCATTTCGAGCGGT
AAGACGTTAAGGATCAGGTTCtatgaaaaaagtaaacaaagccTGTGCTG
AGTGAATGATTCAGTCGGCCCTACCCTGAACATGGCATTCTTCGATAGTA
AACATGTATGAATCGTATGAATCTCACATTTACTTAAGTTGAATCCGAAT
Ggatgaaaaaaattacagaaaatgtcagattcaaaattttttttattcag
attCATGATTGCATACCGCCGcttcattcttcaaaaagaaaTATCCAATA
TGTTTCAGCCATATAGAAATTTGAACCTGCTAGTAAAGCGTTGTTTTACA
TCATCTGTCACTCGGCTAGCATATAGAGATGTTACCAAAGATCACCCGGT
TATTGTTGGATCAAAACAACTCAGAAAACTGTTACAGGAACATGTTGGTG
CAAAGAAGTTTTGGCTTGAAAATATAACAGAACTGTCAAACATAGATGCA
GAGAGGGCTAAAAAACAAGAAGATCTTGTACCACGCTCAAGCAAAGATAG
TGTACAAGAGGTTATTATTCCATTAGGTTCAGACTTGGTTCAGCGTGAAA
AAtacttaacattttacaatacAGTGCGTTTTGGAAAACTCCTTGAAGAT
TTGGATACATTAGCTGGGTGGGTtggcttcaaatattttaaaggACCTAC
TGAAAGAGCTCCCTTCTCTTTGGTCACAGCATGCGTTGACAAAATTAACC
TTCAAGAGAATACCATTTCTTCGACTGAGGATATTAAGTTAACAGGCTTT
ATATCATGGGCTGGAAGAACATCACTTGAGATTACAAGTTATGTTGATCA
GTTTGACCCAGAAACAGGCACATGGAAACGATTATCAGATGCAGTGTTTG
TGATGGTTGCTAGAAGCTTGAAAGATGGTAGCGCTACTTTTGTAAACAAG
TTTGTCCCAACGAATGataaagagaagaaattttttgaacaaGGAGAACT
GAATGTCATTGAGCGTAAACGAAAATCCGCTGAATCTTTATTCAAACAGG
CACCTACTGCTGAGGAACGAAATCTTATTCATCAAATGTTTTTAGGATCT
CTTGATCCAAGCAAATCAACTTTTTCTAGACGTGTCAAGCCTGATAATAC
AGTTTGGATGGAGTACACTAGACTAAAAAATCTACTCATCTGTCATCCAC
AGGCTCGAAATCTCTACAATAAAATCTTTGGTGGTTTTCTCATGCGGGAG
GCTTTTGAATTAGCCTGGGCAAACACTTGCACACACATCAAGTCAAGACC
CACAGTCATTGCAATGGATGATGTAATGTTTCGAAAACCTGTAGAAGTTG
GTTCTTTACTTTATCTATCCAGTGAAATTGTATATTCAAAGGATACCTAT
CTATTGACACGTGTTCATGCTGAAGTAGTTGACCCTAAAACTGGAGATAT
AGACACCACAAATGTGTTTTACTTTCATTTCACAAGTAGGAACGAATTTC
CACAAGTAGCACCTATGTCTTATGGAGAGTATATGTTATACTTAGATGGT
TTGAGGCATGCTAATGCACTTCGTATTCCAGAAGTTACAAACTAGCTTTC
GTTATTTTATCGTAGTTGTGTTGCTTCTGTTTGATTATTGGATATAGAAA
ATCATGTTCGAATTAGAAATTTACAGAAATATCATAATTTTAATAGTTAA
AAGATTTAAATTAAACATACACAAGATTCTTAGAATGTTATGGAATTCAA
AATACTAATACAACATAGTTGTAATTGTAG
Run BLAST on NCBI

protein sequence of TCONS_00022095-protein

>TCONS_00022095-protein ID=TCONS_00022095-protein|Name=TCONS_00022095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
MSDSKFFLFRFMIAYRRFILQKEISNMFQPYRNLNLLVKRCFTSSVTRLA
YRDVTKDHPVIVGSKQLRKLLQEHVGAKKFWLENITELSNIDAERAKKQE
DLVPRSSKDSVQEVIIPLGSDLVQREKYLTFYNTVRFGKLLEDLDTLAGW
VGFKYFKGPTERAPFSLVTACVDKINLQENTISSTEDIKLTGFISWAGRT
SLEITSYVDQFDPETGTWKRLSDAVFVMVARSLKDGSATFVNKFVPTNDK
EKKFFEQGELNVIERKRKSAESLFKQAPTAEERNLIHQMFLGSLDPSKST
FSRRVKPDNTVWMEYTRLKNLLICHPQARNLYNKIFGGFLMREAFELAWA
NTCTHIKSRPTVIAMDDVMFRKPVEVGSLLYLSSEIVYSKDTYLLTRVHA
EVVDPKTGDIDTTNVFYFHFTSRNEFPQVAPMSYGEYMLYLDGLRHANAL
RIPEVTN
Run BLAST on NCBI

transcript from alignment at sc0000405:157192..165759+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022095 ID=TCONS_00022095|Name=TCONS_00022095|organism=Clytia hemisphaerica|type=transcript|length=8568bp|location=Sequence derived from alignment at sc0000405:157192..165759+ (Clytia hemisphaerica)
GCGCATATGTCGCAATTTCCAGACTGGCGGCTAGCAAAAGGTCTTGTGGA
AATGCGTGACTTTCAAGGTCAATGCGAAAGAGTTGCCACCATCTCTCTCT
GTTCTgaaattcattcaaaaaaaaaaatttaaaacaagaaaaatcttaac
TCTAACTGTAAATATAACGCCTAGCTATTTGAAATTTACCTGCTGGGGCA
TGTCCTGCCAAAGTTGGTTCACTCTTTGGGCTGGACATGTTTGTTTAGAT
GATATGGTCTTGCTGAATTCTTCGATTTTGCACTCTCTAGTTCTTCACTT
TTCCCTTGATTTTGCTAGCGTTGGGATTTTCCACACGTTGCCTTTCCTCC
TCGCTTACCTATCAAATAGCTAATTCGTCTAGAGTTCTCCGACGGCTGTA
TCAAAGATAGTTACTCCCAGTATTTCGGCTGAGTAAGCATTTCGAGCGGT
AAGACGTTAAGGATCAGGTTCtatgaaaaaagtaaacaaagccTGTGCTG
AGTGAATGATTCAGTCGGCCCTACCCTGAACATGGCATTCTTCGATAGTA
AACATGTATGAATCGTATGAATCTCACATTTACTTAAGTTGAATCCGAAT
Ggatgaaaaaaattacagaaaatgtcagattcaaaattttttttattcag
attCATGATTGCATACCGCCGcttcattcttcaaaaagaaaTATCCAATG
Tatactttttccaatttttgttttgttttaattataaattgttgtttcat
atttttatcCTTCCTCCCTCTGTCTGTCTGTCTCTTTGcagtttgatttg
aaaattttctgagCTGCTCTCAGGCTGCTGAGAGGATGTTTTTTACATTG
ATTTCGTTATCTTGCTGTTGTAGGTATTTTATTTGCAGTTTTTTATGTTT
GATTAATGTGTGTGCATGGGCTTTATAGCCCTGActcttcatataaaatt
tatgGAAAACACATTTGGCAGCAATTGTGAAAATATGTTGCGTTCGGGGT
CGTCCGACCGactgtttatttacaagaaaacccGATTCAGAAAGTCGGTA
AAATCGTCGGGTTTTTTGGGCGCTGTTCCCAGGTTCAGATCTTTCCCATA
ATGGCGGGCACGGGCGAACGGAGTAtgtctttgaatcattattCTTTGTC
Agtcaggtgtttaagataaaaactgcaattattgctcttttcggaaatta
ttgccgaaaacagcaatttttctAACGATGAAAtgttgaatattacccag
gaatcagccattcgattgagatttgattacgttcgacaatcgaatcgcaa
ttattcgattgcgttcgattacgtttgattggttcgattgcgattttttt
caaagttgttcgattgacaccgtctggacacTCAAAAGCAAAAAGGGTAT
ATACCCttccttgccgaccgacgggggtgctccgctgaggttgaaaaatg
gaccctacatGGGACTTGTATGGAACGCCATAGCTGCCATAAGTGCTCTT
TTTATGTGCTCTTTTTTCATTGAGAtgcgctcttttcattcgctcttttC
TTTCGGTTCGCTCTTTTATTCGCTCTTTTGGTTCGCTCATAGTCATACGC
TCTTTTCGTTTGCTCATTTGCTCTTTTCGTTTGCTCATGTGCTCTTTTTG
TTCGCTTATATGTGCTCTTTTATTCGCTCTTTTGGTGCGCTCTTTTAATT
CGCTCTTTTATTTGCTCTTTATGTTCGCTAAATCATTCAGTTTGCTCTTT
CTTTGCTCTTTTAATTCATTGATGCACTCTtttattcgctcttttcattt
gTTGGTGCGCTCCTTTATTTGCTCCTTTCATTCATTcactcttttcattc
gctcttttATTCGCACATACACTAGAGTTGAGCCCAGTGTGCTTTAGCAC
GTTACAGTTTCAATGCGTCATatgtgtaaaaaccaggtgcGTTGCGCTAG
AGGTCGCACAGCTTTGGTGTGAGTTGTTTgattcaaatcctaccaagagG
AGATCAACAACCTCGTCCttgtgtattccaggctttgtttacgttactga
ttgacgccagagaataccctggtgttagCTGATGCAAGAGGAGAAACTTC
TCAAAACTATATGtacgtcataaaaaatctgacgtcaagttacactgcaa
tgcaatgCTTTCAAATCcaagaacaaatgaaatctgacattttgtttttg
aattgcatAATCTTACATGTTCGAAAAAATTGTTGCCCAAAAATTCTTCT
TGCCTTGGGGCAATGAAACTATTAATATTACTAATATTTCTCGAGCTTTG
TctaaacattaaaaaagcaCGTGATgagcaaaacaaaaacataataGCTA
TTTACAGgatatttttttagaatttcctTTCGGATAATGATAATAAAAGA
GCGCATCAATGAATTAAAAGAGCAAATAAAAGAGCAAACGGAATGCGCGT
TTAGCGAACGTAAAGAGCGAATAAAAAAGCGAATTAAAAGAGCGCACCAA
ACGAGCGAATAAAAGAGCACATANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTCTACAATTTAATCAAT
TGATCTTTCATCCTCTTATATCTTTTCGATCTTTTAATCTATTATGTACA
CAATAACATAATGACAAACTTCAATAGGCTGAGTAATGTTATATTATATT
GTTTTTGAAGTTGCTACCCATATTATGTATGTTATGGTCTATGGATATGG
CATGGCTATGGCTATGGCTAAATAACAGATATATCTTGTAGGTTATATTG
AAGTTATTTGTCTACTCAGGTAAATTAATGCTTGTCCAAATTTTCGgtaa
tttttcctgtttttttatGCCATTTGtagatgacgtcataaaacaaaaaa
aatgatcTCAAGAACTAGCTAACTAAACTTTgtgaaactttcagcaatga
tatACATTTGTGAGTCATTTTGTGATCTTCTTTctcctttctatcaattt
tggactttttctttGTATCCTTGGTTGTTCTCGCTGGAATTTGGCTTTCA
CATTTTGTTCAAGAAGATTTTGTTACTCATTTCTAGGATTTCTTGTGATC
ATCATGCTTAGTTTGTCATTTCAGTTAATTGGATTCAGATCATTTTTCAG
TTCCTTCCTTTCAATTTCatccaagaaaaaaaaaatgcattGAATTCTGA
AAGAGGTTCTGGTTTGCCATCATCATTTTGAAATCCCCACTAAAATTTAT
GTTTGTGACAGGATCCAGGGCTAAAAGGGCAAGTTTTACACCTTTCAGTG
GtgtttgaaaatcttttgctaTTGAGGAATTTCCCATCATTGCTCTTGTC
CTTCGGTTATCTTTACACTACTACTGTAGGATTGCTAAGTTTTTAGTGCT
TGAGTATAACACGAAGAAGTTCTCTTTCAAACTGGTTTTTTAAAGCTTTA
GAGCTTTGACCTTTCTCTTTACaaagaaaatatattattttgaaattaac
cagccctttttctttaaaagcctattttttcaaactttttaccTTTCGGC
CTATTAGTTCATTGTAACCAAAACTCATCTGGGCACAGACCAATGTCTTT
TGTCCTTTTAGGTGTCATCTAATAAACagggattttgaaaaatattcaaa
tttttagtcaaATAATAACTTACATACTTTTAATAACTTAAATGAACATC
TAAAGACagccaaatatattttgaaaaattaacaaatagAAGGCAATCAT
TTTAATCATCCAAGACTCTTGGACAGCTTGGGGATCGAGAATAGACTTAC
AGTATTAATGCAATTTCTATATTTTGTAATATTCTACTGACATTCAACGT
TTGAGTTTAGGTTGGCCTCATTGGTATGATTTTGAAAGGTACAATAGCAC
TTAATTGTCACTTGATGCTTGATGCTTGAATAAAAAAAGAGAGTTGTTTT
TGGTATTTAATCCCGTTAATCTGGGTTAATCTGTTTCTTACCTTAAAACA
TGGCATATAAGTATACTATCTTGATaaataaatagttttatacattatat
ataattattttataaaaCATTCTTTAACAAATAATTTTTGTCTCCTTAAA
AAGATGTTTCAGCCATATAGAAATTTGAACCTGCTAGTAAAGCGTTGTTT
TACATCATCTGTCACTCGGCTAGCATATAGAGATGTTACCAAAGATCACC
CGGTTATTGTTGGATCAAAACAACTCAGAAAACTGTTACAGGTGAAgagc
ttttttaaaacatatgCTATTAAATATGAAAAGTCAAGCAAATGGTTTTG
AGAatgtattttcaaagacaaattATAGAcgagttgttttttttatttac
tgtTGCTCTGCTTGGAAATGGTGTTGTTGGAAATAATTGTTAGAGTTGAT
AAATATTTGGCTATTGACAGCTAGACATATTTTAAAGCTTGGTGCTCACT
GAAaaataataccttaagggaagaaatttttgcagaaagaaattttttgt
ggAACTTCATTTCGCTGTTCACAGCTCGAAATTCTTCAGATATTCTTAAC
CTTTGAGTTTTTAAAGCCTAAAATGtcctatttttttattttcgccatta
tgaaagtatttttgtccgttttcctaTGAAACTGGGTCTTTTATGGTCAG
CAAAACCTTAAAAGGTTCTTAActagttcttaatattttagccatcaatt
ttatatagtttgttcttaaagaacGTGTATTTAATGTTATAGGAACATGT
TGGTGCAAAGAAGTTTTGGCTTGAAAATATAACAGAACTGTCAAACATAG
ATGCAGAGAGGGCTAAAAAACAAGAAGATCTTGTACCACGCTCAAGCAAA
GATAGTGTACAAGAGGTTATTATTCCATTAGGTATGTGAGATCCTTTCCA
TCAAGGGACGCATCTTGGTCTCTGATATTAAGACAAAACAAAGCAAAGGG
GGTAGCTCAAAAATGTGCTTAAAATCCAGATTGatctgtgaaaaaaaaat
taaaaaatccaaaataacCTCCTTAACATTGGGgtgaatttttcatataa
tAAGCTTTTAATTTCATAACACTACTATTTTAGTgcaagttttgttttgt
tttatattatttttgttattaataGAGTAAATTTAGTCATCCAATTTATT
AAAGTTTTTAACTAGATGATGATTCAATCATATATTGATGATTTAGTATA
ATAATTTATAATTAATAAATTATGTATAATAATTTCACATAAAATCTTCA
CCTTGTTTTTTTAGGTTCAGACTTGGTTCAGCGTGAAAAAtacttaacat
tttacaatacAGTGCGTTTTGGAAAACTCCTTGAAGATTTGGATACATTA
GCTGGGTGGGTtggcttcaaatattttaaaggACCTACTGAAAGAGCTCC
CTTCTCTTTGGTCACAGCATGCGTTGACAAAATTAACCTTCAAGAGAATA
CCATTTCTTCGACTGAGGATATTAAGTTAACAGGCTTTATATCATGGGCT
GGAAGAACATCACTTGAGATTACAAGTTATGTTGATCAGTTTGACCCAGA
AACAGGCACATGGAAACGATTATCAGATGCAGTGTTTGTGATGGTTGCTA
GAAGCTTGAAAGATGGTAGCGCTACTTTTGTAAACAAGTTTGTCCCAACG
AATGataaagagaagaaattttttgaacaaGGAGAACTGAATGTCATTGA
GCGTAAACGAAAATCCGCTGAATCTTTATTCAAACAGGCACCTACTGCTG
AGGAACGAAATCTTATTCATCAAATGTTTTTAGGATCTCTTGATCCAAGC
AAATCAACTTTTTCTAGACGTGTCAAGCCTGATAATACAGTTTGGATGGA
GTACACTAGACTAAAAAATCTACTCATCTGTCATCCACAGGCTCGAAATC
TCTACAATAAAATCTTTGGTGGTTTTCTCATGCGGGAGGCTTTTGAATTA
GCCTGGGCAAACACTTGCACACACATCAAGTCAAGACCCACAGTCATTGC
AATGGATGATGTAATGTTTCGAAAACCTGTAGAAGTTGGTTCTTTACTTT
ATCTATCCAGTGAAATTGTATATTCAAAGGATACCTATCTATTGACACGT
GTTCATGCTGAAGTAGTTGACCCTAAAACTGGAGATATAGACACCACAAA
TGTGTTTTACTTTCATTTCACAAGTAGGAACGAATTTCCACAAGTAGCAC
CTATGTCTTATGGAGAGTATATGTTATACTTAGATGGTTTGAGGCATGCT
AATGCACTTCGTATTCCAGAAGTTACAAACTAGCTTTCGTTATTTTATCG
TAGTTGTGTTGCTTCTGTTTGATTATTGGATATAGAAAATCATGTTCGAA
TTAGAAATTTACAGAAATATCATAATTTTAATAGTTAAAAGATTTAAATT
AAACATACACAAGATTCTTAGAATGTTATGGAATTCAAAATACTAATACA
ACATAGTTGTAATTGTAG

Coding sequence (CDS) from alignment at sc0000405:157192..165759+

>TCONS_00022095 ID=TCONS_00022095|Name=TCONS_00022095|organism=Clytia hemisphaerica|type=CDS|length=5496bp|location=Sequence derived from alignment at sc0000405:157192..165759+ (Clytia hemisphaerica)
atgtcagattcaaaattttttttattcagattCATGATTGCATACCGCCG
cttcattcttcaaaaagaaaTATCCAATATGTTTCAGCCATATAGAAATT
TGAACCTGCTAGTAAAGCGTTGTTTTACATCATCTGTCACTCGGCTAGCA
TATAGAGATGTTACCAAAGATCACCCGGTTATTGTTGGATCAAAACAACT
CAGAAAACTGTTACAGGAACATGTTGGTGCAAAGAAGTTTTGGCTTGAAA
ATATAACAGAACTGTCAAACATAGATGCAGAGAGGGCTAAAAAACAAGAA
GATCTTGTACCACGCTCAAGCAAAGATAGTGTACAAGAGGTTATTATTCC
ATTAGGTTCAGACTTGGTTCAGCGTGAAAAAtacttaacattttacaata
cAGTGCGTTTTGGAAAACTCCTTGAAGATTTGGATACATTAGCTGGGTGG
GTtggcttcaaatattttaaaggACCTACTGAAAGAGCTCCCTTCTCTTT
GGTCACAGCATGCGTTGACAAAATTAACCTTCAAGAGAATACCATTTCTT
CGACTGAGGATATTAAGTTAACAGGCTTTATATCATGGGCTGGAAGAACA
TCACTTGAGATTACAAGTTATGTTGATCAGTTTGACCCAGAAACAGGCAC
ATGGAAACGATTATCAGATGCAGTGTTTGTGATGGTTGCTAGAAGCTTGA
AAGATGGTAGCGCTACTTTTGTAAACAAGTTTGTCCCAACGAATGataaa
gagaagaaattttttgaacaaGGAGAACTGAATGTCATTGAGCGTAAACG
AAAATCCGCTGAATCTTTATTCAAACAGGCACCTACTGCTGAGGAACGAA
ATCTTATTCATCAAATGTTTTTAGGATCTCTTGATCCAAGCAAATCAACT
TTTTCTAGACGTGTCAAGCCTGATAATACAGTTTGGATGGAGTACACTAG
ACTAAAAAATCTACTCATCTGTCATCCACAGGCTCGAAATCTCTACAATA
AAATCTTTGGTGGTTTTCTCATGCGGGAGGCTTTTGAATTAGCCTGGGCA
AACACTTGCACACACATCAAGTCAAGACCCACAGTCATTGCAATGGATGA
TGTAATGTTTCGAAAACCTGTAGAAGTTGGTTCTTTACTTTATCTATCCA
GTGAAATTGTATATTCAAAGGATACCTATCTATTGACACGTGTTCATGCT
GAAGTAGTTGACCCTAAAACTGGAGATATAGACACCACAAATGTGTTTTA
CTTTCATTTCACAAGTAGGAACGAATTTCCACAAGTAGCACCTATGTCTT
ATGGAGAGTATATGTTATACTTAGATGGTTTGAGGCATGCTAATGCACTT
CGTATTCCAGAAGTTACAAACTAGatgtcagattcaaaattttttttatt
cagattCATGATTGCATACCGCCGcttcattcttcaaaaagaaaTATCCA
ATATGTTTCAGCCATATAGAAATTTGAACCTGCTAGTAAAGCGTTGTTTT
ACATCATCTGTCACTCGGCTAGCATATAGAGATGTTACCAAAGATCACCC
GGTTATTGTTGGATCAAAACAACTCAGAAAACTGTTACAGGAACATGTTG
GTGCAAAGAAGTTTTGGCTTGAAAATATAACAGAACTGTCAAACATAGAT
GCAGAGAGGGCTAAAAAACAAGAAGATCTTGTACCACGCTCAAGCAAAGA
TAGTGTACAAGAGGTTATTATTCCATTAGGTTCAGACTTGGTTCAGCGTG
AAAAAtacttaacattttacaatacAGTGCGTTTTGGAAAACTCCTTGAA
GATTTGGATACATTAGCTGGGTGGGTtggcttcaaatattttaaaggACC
TACTGAAAGAGCTCCCTTCTCTTTGGTCACAGCATGCGTTGACAAAATTA
ACCTTCAAGAGAATACCATTTCTTCGACTGAGGATATTAAGTTAACAGGC
TTTATATCATGGGCTGGAAGAACATCACTTGAGATTACAAGTTATGTTGA
TCAGTTTGACCCAGAAACAGGCACATGGAAACGATTATCAGATGCAGTGT
TTGTGATGGTTGCTAGAAGCTTGAAAGATGGTAGCGCTACTTTTGTAAAC
AAGTTTGTCCCAACGAATGataaagagaagaaattttttgaacaaGGAGA
ACTGAATGTCATTGAGCGTAAACGAAAATCCGCTGAATCTTTATTCAAAC
AGGCACCTACTGCTGAGGAACGAAATCTTATTCATCAAATGTTTTTAGGA
TCTCTTGATCCAAGCAAATCAACTTTTTCTAGACGTGTCAAGCCTGATAA
TACAGTTTGGATGGAGTACACTAGACTAAAAAATCTACTCATCTGTCATC
CACAGGCTCGAAATCTCTACAATAAAATCTTTGGTGGTTTTCTCATGCGG
GAGGCTTTTGAATTAGCCTGGGCAAACACTTGCACACACATCAAGTCAAG
ACCCACAGTCATTGCAATGGATGATGTAATGTTTCGAAAACCTGTAGAAG
TTGGTTCTTTACTTTATCTATCCAGTGAAATTGTATATTCAAAGGATACC
TATCTATTGACACGTGTTCATGCTGAAGTAGTTGACCCTAAAACTGGAGA
TATAGACACCACAAATGTGTTTTACTTTCATTTCACAAGTAGGAACGAAT
TTCCACAAGTAGCACCTATGTCTTATGGAGAGTATATGTTATACTTAGAT
GGTTTGAGGCATGCTAATGCACTTCGTATTCCAGAAGTTACAAACTAGat
gtcagattcaaaattttttttattcagattCATGATTGCATACCGCCGct
tcattcttcaaaaagaaaTATCCAATATGTTTCAGCCATATAGAAATTTG
AACCTGCTAGTAAAGCGTTGTTTTACATCATCTGTCACTCGGCTAGCATA
TAGAGATGTTACCAAAGATCACCCGGTTATTGTTGGATCAAAACAACTCA
GAAAACTGTTACAGGAACATGTTGGTGCAAAGAAGTTTTGGCTTGAAAAT
ATAACAGAACTGTCAAACATAGATGCAGAGAGGGCTAAAAAACAAGAAGA
TCTTGTACCACGCTCAAGCAAAGATAGTGTACAAGAGGTTATTATTCCAT
TAGGTTCAGACTTGGTTCAGCGTGAAAAAtacttaacattttacaatacA
GTGCGTTTTGGAAAACTCCTTGAAGATTTGGATACATTAGCTGGGTGGGT
tggcttcaaatattttaaaggACCTACTGAAAGAGCTCCCTTCTCTTTGG
TCACAGCATGCGTTGACAAAATTAACCTTCAAGAGAATACCATTTCTTCG
ACTGAGGATATTAAGTTAACAGGCTTTATATCATGGGCTGGAAGAACATC
ACTTGAGATTACAAGTTATGTTGATCAGTTTGACCCAGAAACAGGCACAT
GGAAACGATTATCAGATGCAGTGTTTGTGATGGTTGCTAGAAGCTTGAAA
GATGGTAGCGCTACTTTTGTAAACAAGTTTGTCCCAACGAATGataaaga
gaagaaattttttgaacaaGGAGAACTGAATGTCATTGAGCGTAAACGAA
AATCCGCTGAATCTTTATTCAAACAGGCACCTACTGCTGAGGAACGAAAT
CTTATTCATCAAATGTTTTTAGGATCTCTTGATCCAAGCAAATCAACTTT
TTCTAGACGTGTCAAGCCTGATAATACAGTTTGGATGGAGTACACTAGAC
TAAAAAATCTACTCATCTGTCATCCACAGGCTCGAAATCTCTACAATAAA
ATCTTTGGTGGTTTTCTCATGCGGGAGGCTTTTGAATTAGCCTGGGCAAA
CACTTGCACACACATCAAGTCAAGACCCACAGTCATTGCAATGGATGATG
TAATGTTTCGAAAACCTGTAGAAGTTGGTTCTTTACTTTATCTATCCAGT
GAAATTGTATATTCAAAGGATACCTATCTATTGACACGTGTTCATGCTGA
AGTAGTTGACCCTAAAACTGGAGATATAGACACCACAAATGTGTTTTACT
TTCATTTCACAAGTAGGAACGAATTTCCACAAGTAGCACCTATGTCTTAT
GGAGAGTATATGTTATACTTAGATGGTTTGAGGCATGCTAATGCACTTCG
TATTCCAGAAGTTACAAACTAGatgtcagattcaaaattttttttattca
gattCATGATTGCATACCGCCGcttcattcttcaaaaagaaaTATCCAAT
ATGTTTCAGCCATATAGAAATTTGAACCTGCTAGTAAAGCGTTGTTTTAC
ATCATCTGTCACTCGGCTAGCATATAGAGATGTTACCAAAGATCACCCGG
TTATTGTTGGATCAAAACAACTCAGAAAACTGTTACAGGAACATGTTGGT
GCAAAGAAGTTTTGGCTTGAAAATATAACAGAACTGTCAAACATAGATGC
AGAGAGGGCTAAAAAACAAGAAGATCTTGTACCACGCTCAAGCAAAGATA
GTGTACAAGAGGTTATTATTCCATTAGGTTCAGACTTGGTTCAGCGTGAA
AAAtacttaacattttacaatacAGTGCGTTTTGGAAAACTCCTTGAAGA
TTTGGATACATTAGCTGGGTGGGTtggcttcaaatattttaaaggACCTA
CTGAAAGAGCTCCCTTCTCTTTGGTCACAGCATGCGTTGACAAAATTAAC
CTTCAAGAGAATACCATTTCTTCGACTGAGGATATTAAGTTAACAGGCTT
TATATCATGGGCTGGAAGAACATCACTTGAGATTACAAGTTATGTTGATC
AGTTTGACCCAGAAACAGGCACATGGAAACGATTATCAGATGCAGTGTTT
GTGATGGTTGCTAGAAGCTTGAAAGATGGTAGCGCTACTTTTGTAAACAA
GTTTGTCCCAACGAATGataaagagaagaaattttttgaacaaGGAGAAC
TGAATGTCATTGAGCGTAAACGAAAATCCGCTGAATCTTTATTCAAACAG
GCACCTACTGCTGAGGAACGAAATCTTATTCATCAAATGTTTTTAGGATC
TCTTGATCCAAGCAAATCAACTTTTTCTAGACGTGTCAAGCCTGATAATA
CAGTTTGGATGGAGTACACTAGACTAAAAAATCTACTCATCTGTCATCCA
CAGGCTCGAAATCTCTACAATAAAATCTTTGGTGGTTTTCTCATGCGGGA
GGCTTTTGAATTAGCCTGGGCAAACACTTGCACACACATCAAGTCAAGAC
CCACAGTCATTGCAATGGATGATGTAATGTTTCGAAAACCTGTAGAAGTT
GGTTCTTTACTTTATCTATCCAGTGAAATTGTATATTCAAAGGATACCTA
TCTATTGACACGTGTTCATGCTGAAGTAGTTGACCCTAAAACTGGAGATA
TAGACACCACAAATGTGTTTTACTTTCATTTCACAAGTAGGAACGAATTT
CCACAAGTAGCACCTATGTCTTATGGAGAGTATATGTTATACTTAGATGG
TTTGAGGCATGCTAATGCACTTCGTATTCCAGAAGTTACAAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012392XLOC_012392Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022095-exon-sc0000405-1491911889:157192..157890TCONS_00022095-exon-sc0000405-1491911889:157192..157890Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1510915933:157192..157890TCONS_00022095-exon-sc0000405-1510915933:157192..157890Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1575043694:157192..157890TCONS_00022095-exon-sc0000405-1575043694:157192..157890Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1491911889:163395..163532TCONS_00022095-exon-sc0000405-1491911889:163395..163532Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1510915933:163395..163532TCONS_00022095-exon-sc0000405-1510915933:163395..163532Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1575043694:163395..163532TCONS_00022095-exon-sc0000405-1575043694:163395..163532Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1491911889:164034..164172TCONS_00022095-exon-sc0000405-1491911889:164034..164172Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1510915933:164034..164172TCONS_00022095-exon-sc0000405-1510915933:164034..164172Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1575043694:164034..164172TCONS_00022095-exon-sc0000405-1575043694:164034..164172Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1491911889:164556..165759TCONS_00022095-exon-sc0000405-1491911889:164556..165759Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1510915933:164556..165759TCONS_00022095-exon-sc0000405-1510915933:164556..165759Clytia hemisphaericaexon
TCONS_00022095-exon-sc0000405-1575043694:164556..165759TCONS_00022095-exon-sc0000405-1575043694:164556..165759Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022095-proteinTCONS_00022095-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:157192..165759 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.736294	0.403906	0.333664	0.466698	1.49718	1.3202	1.33406	2.30878	0.774651	0.148212	0.291476	0.4763	0.635373	0.50963	0.585129	1.11702	1.25682	1.82879	0.633727	0.385914	1.27081	0.722734	0.702554	1.54361	2.42939	2.24528	1.12451	0.389959	1.96832	3.08311
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR033120HOTDOG_ACOT
IPR029069HotDog_dom
Blast
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BLAST of TCONS_00022095 vs. Swiss-Prot (Human)
Match: ACOT9 (Acyl-coenzyme A thioesterase 9, mitochondrial OS=Homo sapiens GN=ACOT9 PE=1 SV=2)

HSP 1 Score: 374.015 bits (959), Expect = 2.448e-121
Identity = 189/397 (47.61%), Postives = 265/397 (66.75%), Query Frame = 1 
Query:  817 QLRKLLQEHVGAKKFWLENITELSN---IDAERAKKQEDLVPRSSKDSVQEVIIPLGSDLVQREKYLTFYNTVRFGKLLEDLDTLAGWVGFKYFKGPTER-APFSLVTACVDKINLQENTISSTEDIKLTGFISWAGRTSLEITS-----YVDQFDPETGTWKRLSDAVFVMVARSLKDGSATFVNKFVPTNDKEKKFFEQGELNVIERKRKSAESLFKQAPTAEERNLIHQMFLGSLDPSKSTFSRRVKPDNTVWMEYTRLKNLLICHPQARNLYNKIFGGFLMREAFELAWANTCTHIKSRPTVIAMDDVMFRKPVEVGSLLYLSSEIVYSKDTYLLTRVHAEVVDPKTGDIDTTNVFYFHFTSRNEFPQVAPMSYGEYMLYLDGLRHANALRIP 1980
            ++R  L+E VGA   W +++  +     + +  AK Q+ L PR  KDS  EV++PLGS+   REKYLT  NTVRFG++LEDLD+L   + + + K  + + +P S+VTA VDKI++ + ++S  +DIK +G +SW G+TS+E+       + D+F P       + DA FVMVAR  ++    FVN  +P + +E++ F QGELN   R   S+ SL K AP+AEER  IH+MFL +LDP   +F  RV P N VWME ++LK+L ICHPQ RN++N+IFGGFLMR+A+ELAWA  C+   SRP V+A+DD+MF+KPVEVGSLL+LSS++ ++++ Y+  RVH+EV   +     TTNVF+F F S  E P V P +YGE MLYLDG RH N++  P
Sbjct:   39 EVRDKLREIVGASTNWRDHVKAMEERKLLHSFLAKSQDGLPPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAKMSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCP-------VLDATFVMVARDSENKGPAFVNPLIPESPEEEELFRQGELNKGRRIAFSSTSLLKMAPSAEERTTIHEMFLSTLDPKTISFRSRVLPSNAVWMENSKLKSLEICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSRPFVVAVDDIMFQKPVEVGSLLFLSSQVCFTQNNYIQVRVHSEVASLQEKQHTTTNVFHFTFMSEKEVPLVFPKTYGESMLYLDGQRHFNSMSGP 428
The following BLAST results are available for this feature:
BLAST of TCONS_00022095 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACOT92.448e-12147.61Acyl-coenzyme A thioesterase 9, mitochondrial OS=H... [more]
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