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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022084 ID=TCONS_00022084|Name=TCONS_00022084|organism=Clytia hemisphaerica|type=transcript|length=2865bp
ATATCATATTGTAGTTACAGTggagtttccataactcgaatacaCACACG
GGAAACATAAATTTACTCGAGTTACAGTAATTTCGAGTGAATGAGACACG
GTTATAAGGcgttgttaactgaagggacaagaAAACCTGCtcaagacatt
cgagttatgaagactaCACTGTACAGTACATGGGATTCATGTGTTCATTT
TGACAGAAAGGATTTCATCATCGTGAGTGCCTCTGACTCACTTAGTCTAT
GTAGCTTTGCATCTCTAATGACGTCACGATGTGTAGAGTTCGTCACACTT
GCTTCTTTTTAAGACCAGCATGATACTGTTCGAAAGTTAGCTTTTTTATA
TAGCATTCATTGGAAGCTCTGGCACAATGGTCAATCCAATTAAATTGTTG
ATTTTGAAGTAGCTTAAGAGCGAAGGTCGATCGATaaagtttttgatttg
ttcATTGAATAGAGCAATTTTTTGAATGTTCctttcttttcatcttttat
GTTGTAATCGATTAGTTATGGTTTGCGTTGGTTACCCCCTTTGAATATGT
ATCGTAAGAACGTTAGTGTCCAGCATTGACATCCATGAACAAACAAGAGA
CTCAGTATAAGATTCTGGTATGTAGTTTGATTTTGTAGTTCGTAAAGAAG
GGCTTCGATTcataaaaatttgcaaatggCTGAAGAAATACGATGCTCTA
GCTCAACATCTCCAGTTGAGCTATTGCCATATTCAATAAATGCTCCAAGG
TATTTGAACGATTTGGAGTTTTTGATTGGAGTTCCATTAAACGATACAAT
CATCAGGGTCTGCTTTTCCTAATTTCCAATTCAAAATTAGGGTTTCAGTT
TTATCGGGTTTAAGTTTTTAAGCAATACTCAGAAAAAACTTCATTCAAAA
TGGTGGTATTGTTTTCTTTGATCAAGAAGTTATCTCATGGAAATGGTTGC
TTTTGGATTTTGTTGAAACGTGAACGTGAAAGTAAATATTATGTTTATCA
AAGATACCCTATAAATTCTCTATTTAGCCTCTCTTCGTAACTGTAATGTC
GTCATTTTTACAACCACCAAGATATAATAAGAGTTCCCAAATTACACTTA
TTCTTTATAAATTGtggttttatgtttttataagaatatttaaaatcttA
AGATGTTTTTACCTTGTTCTTAATATACTTGCAATTGTAGCCTTATGTTT
CTCATAGCTTGTCTTTGCAAAGAAGAGAACTTCATCTTCGCAATTTACTT
CAAAACAAGCAACCTTCGGGAACGCCTTAAAGCCAATTGGTTAGgaccac
agatttataaagcccgaagggctagatagtgtgctttaagccatcacaGG
TAAAAAAAGTGagtatcggaaaaaatattgttgctattgtttttcgaaaa
cccgtgaagcttctgattggtcaaccgctgaaattatattgtaatgtcac
gtgacttaggtaggatttcctacctaaccacggcactcttttcagcaaaa
gtacgccatctagtctttcgggctttataaatctatggttagGACATTCA
AATGGTATATGTATCTCAATCATAACGGCTTGGGCATCGTGATTCTGTGA
AGTTTTCTTTCGGTTTGTCATGACATGAAACAAGCTTTAAGAGATCTGTA
ATCATGTTTGTGAATTAGATTATCAAGTTCTACATTTGTAGAGAAATGAG
CTTTATGAGCTTTGGTTTTATGTTAAAATCATTAGTAATTGTCAGTTTCA
GTTAGTCTTAAAGATTAAATTATAGTTATAATCACAGTTATAATATTGCC
TCATTTAGGGAGGACATCTGCATATTTTGTATAACTCAACATGTCCGCAG
CTCTGGAAACGAACACTGGTATATGTAGATAAGACTTTAATTTAAAGTTC
GATGATTATAAAATTAATTTCGACAAGAGTTttgtgtgtttgtttgtttt
gacatTACACACGATTATAAGAGATAAGGAAGAGCTTTTTACGGACCTAA
CGTGAACAAGATATTCTGTCAATATTGAtttcaataatgtttttctTAAT
CAAAATGAAATACACTTTGTATGAGTGTTAACAACATATGTCAAATTCCT
TTACACGCTATATAGGCTAACTGGTCCCGTGAAAGCTTGTTCAGTTTTGT
GGTTGACTagtccgccattttgttttctaaGTTACCTTAGATTTTTGAAc
cttgaatttcaaaacattcggaTAGCGCTCTGTCGCGCTGTTGACGAcaa
gaattgaaaacaaaatggtGAGCTAGTCAGCTCTAAAACTGGACACGCTT
TCTTTTATAAAGGAATCCCGATCCAGTCAACTAGTTAGATATCAGTGGTG
CTTGATTTTCCAATCTTTTAAAATCAGTTATTGAAAGGTTGTTTTTATGT
GTTCTTTCTGTTGGTTAGGAGTCATTATGGTGTCATTTTAATCCACGTTT
AAGTGATATGGTAGCGATAATCGAATGCTTTGAGATCTTTGGTGTGAAGA
TTCCGTCTAAGGCGCTGGACAAGATTTCGAAAGTTCTTTACTTATCCATT
TCCCAAAGTTGACATATTAAATTTGCAACTTTTTGACTAAAGTAGTATAA
CGTAAGAACCgtgtgggaactaattttaagAGGTTTCCCAATTGTCAATT
CTTGCCTTTGGAACATACAGGCAAAACGATTTTACAGTGtgttccaaaaa
aaagaaaaaagaacactGGTCCGCTTTTTTACACCGTATCTTTTCACTAG
AACCATTAATGGGTTTTGTCTCAAAGTCTCAAAGTATCATACTCTTGATT
ATCTGATAATGGACATTTTGCATTGTCTGTTTTGGAAAATTCAATGTTAT
CTTAAAACGTTAGCA Run BLAST on NCBI transcript from alignment at sc0000403:53023..55887 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022084 ID=TCONS_00022084|Name=TCONS_00022084|organism=Clytia hemisphaerica|type=transcript|length=2865bp|location=Sequence derived from alignment at sc0000403:53023..55887 (Clytia hemisphaerica)
TGCTAACGTTTTAAGATAACATTGAATTTTCCAAAACAGACAATGCAAAA
TGTCCATTATCAGATAATCAAGAGTATGATACTTTGAGACTTTGAGACAA
AACCCATTAATGGTTCTAGTGAAAAGATACGGTGTAAAAAAGCGGACCag
tgttcttttttcttttttttggaacaCACTGTAAAATCGTTTTGCCTGTA
TGTTCCAAAGGCAAGAATTGACAATTGGGAAACCTcttaaaattagttcc
cacacGGTTCTTACGTTATACTACTTTAGTCAAAAAGTTGCAAATTTAAT
ATGTCAACTTTGGGAAATGGATAAGTAAAGAACTTTCGAAATCTTGTCCA
GCGCCTTAGACGGAATCTTCACACCAAAGATCTCAAAGCATTCGATTATC
GCTACCATATCACTTAAACGTGGATTAAAATGACACCATAATGACTCCTA
ACCAACAGAAAGAACACATAAAAACAACCTTTCAATAACTGATTTTAAAA
GATTGGAAAATCAAGCACCACTGATATCTAACTAGTTGACTGGATCGGGA
TTCCTTTATAAAAGAAAGCGTGTCCAGTTTTAGAGCTGACTAGCTCacca
ttttgttttcaattcttgTCGTCAACAGCGCGACAGAGCGCTAtccgaat
gttttgaaattcaaggTTCAAAAATCTAAGGTAACttagaaaacaaaatg
gcggactAGTCAACCACAAAACTGAACAAGCTTTCACGGGACCAGTTAGC
CTATATAGCGTGTAAAGGAATTTGACATATGTTGTTAACACTCATACAAA
GTGTATTTCATTTTGATTAagaaaaacattattgaaaTCAATATTGACAG
AATATCTTGTTCACGTTAGGTCCGTAAAAAGCTCTTCCTTATCTCTTATA
ATCGTGTGTAatgtcaaaacaaacaaacacacaaAACTCTTGTCGAAATT
AATTTTATAATCATCGAACTTTAAATTAAAGTCTTATCTACATATACCAG
TGTTCGTTTCCAGAGCTGCGGACATGTTGAGTTATACAAAATATGCAGAT
GTCCTCCCTAAATGAGGCAATATTATAACTGTGATTATAACTATAATTTA
ATCTTTAAGACTAACTGAAACTGACAATTACTAATGATTTTAACATAAAA
CCAAAGCTCATAAAGCTCATTTCTCTACAAATGTAGAACTTGATAATCTA
ATTCACAAACATGATTACAGATCTCTTAAAGCTTGTTTCATGTCATGACA
AACCGAAAGAAAACTTCACAGAATCACGATGCCCAAGCCGTTATGATTGA
GATACATATACCATTTGAATGTCctaaccatagatttataaagcccgaaa
gactagatggcgtacttttgctgaaaagagtgccgtggttaggtaggaaa
tcctacctaagtcacgtgacattacaatataatttcagcggttgaccaat
cagaagcttcacgggttttcgaaaaacaatagcaacaatattttttccga
tactCACTTTTTTTACCtgtgatggcttaaagcacactatctagcccttc
gggctttataaatctgtggtcCTAACCAATTGGCTTTAAGGCGTTCCCGA
AGGTTGCTTGTTTTGAAGTAAATTGCGAAGATGAAGTTCTCTTCTTTGCA
AAGACAAGCTATGAGAAACATAAGGCTACAATTGCAAGTATATTAAGAAC
AAGGTAAAAACATCTTaagattttaaatattcttataaaaacataaaacc
aCAATTTATAAAGAATAAGTGTAATTTGGGAACTCTTATTATATCTTGGT
GGTTGTAAAAATGACGACATTACAGTTACGAAGAGAGGCTAAATAGAGAA
TTTATAGGGTATCTTTGATAAACATAATATTTACTTTCACGTTCACGTTT
CAACAAAATCCAAAAGCAACCATTTCCATGAGATAACTTCTTGATCAAAG
AAAACAATACCACCATTTTGAATGAAGTTTTTTCTGAGTATTGCTTAAAA
ACTTAAACCCGATAAAACTGAAACCCTAATTTTGAATTGGAAATTAGGAA
AAGCAGACCCTGATGATTGTATCGTTTAATGGAACTCCAATCAAAAACTC
CAAATCGTTCAAATACCTTGGAGCATTTATTGAATATGGCAATAGCTCAA
CTGGAGATGTTGAGCTAGAGCATCGTATTTCTTCAGccatttgcaaattt
ttatgAATCGAAGCCCTTCTTTACGAACTACAAAATCAAACTACATACCA
GAATCTTATACTGAGTCTCTTGTTTGTTCATGGATGTCAATGCTGGACAC
TAACGTTCTTACGATACATATTCAAAGGGGGTAACCAACGCAAACCATAA
CTAATCGATTACAACataaaagatgaaaagaaagGAACATTCAAAAAATT
GCTCTATTCAATgaacaaatcaaaaactttATCGATCGACCTTCGCTCTT
AAGCTACTTCAAAATCAACAATTTAATTGGATTGACCATTGTGCCAGAGC
TTCCAATGAATGCTATATAAAAAAGCTAACTTTCGAACAGTATCATGCTG
GTCTTAAAAAGAAGCAAGTGTGACGAACTCTACACATCGTGACGTCATTA
GAGATGCAAAGCTACATAGACTAAGTGAGTCAGAGGCACTCACGATGATG
AAATCCTTTCTGTCAAAATGAACACATGAATCCCATGTACTGTACAGTGt
agtcttcataactcgaatgtcttgaGCAGGTTTtcttgtcccttcagtta
acaacgCCTTATAACCGTGTCTCATTCACTCGAAATTACTGTAACTCGAG
TAAATTTATGTTTCCCGTGTGtgtattcgagttatggaaactccACTGTA
ACTACAATATGATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022084-exon-sc0000403-1491911889:53023..55887 | TCONS_00022084-exon-sc0000403-1491911889:53023..55887 | Clytia hemisphaerica | exon |
| TCONS_00022084-exon-sc0000403-1510915933:53023..55887 | TCONS_00022084-exon-sc0000403-1510915933:53023..55887 | Clytia hemisphaerica | exon |
| TCONS_00022084-exon-sc0000403-1575043694:53023..55887 | TCONS_00022084-exon-sc0000403-1575043694:53023..55887 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403 | supercontig | sc0000403:53023..55887 . |
Blast
The following BLAST results are available for this feature:
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