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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022024 ID=TCONS_00022024|Name=TCONS_00022024|organism=Clytia hemisphaerica|type=transcript|length=838bp
GTCAGTTTAATCGAAgaaatccaaagaaaacaaTCTCTTTTACCCTAAGG
CATTGACATTGATATATGTTATCCCCCTGAAAACATTTCTATCGAGTCAG
CAAGGCTCGTACCCAGTGATTcatgaaaatcatcaaaaaaatttaacacc
TACAAAAAAACACCTTGACCAAAACATGGGCTTAAGATATTTTATGTATA
CATATAATAACATAGTATGATAATATCATAACATAATAATAGTAAAAACT
TTTTCCATGGTGGGGTTATATTATAAACAATATTATATATaggagaaaat
attaaaaacatgtTATAGTTTAAAACCATCCAATTATttacaacaataaa
aaaaaatcaatgaccAGAAAATTTATATTACttttttcaaagtgaaaaaa
aatcaatttttcaaaaaagagaaaattttaaagCAAACGCCTTTGAAATC
TTCCTTGAAATATCATGCAATGGGGAATTTAATCTAAACTCATACTGCCC
AATCCAAAGGTATAATTACCGCGTTAtgttatgctataaagatgaTAATG
AGGTCTCACTTACATGCATTGATCAATAAAAAAACGTAAATATCTGGAGA
GACTTACAAATTTCTGTAGCAACACACATAAACGAGAAAGAGAACCTTTT
AATATGATGAAGTGCAACTGAAAAcattataaatttcttttttgatataA
TAAGCCCCCGTAATCCTTTAATAAGTTTCACGCGAGCTACCAAAATGAAG
CCAGCGTCAGTTTCGCAGCGTCAGCGTCAGCGTCAGCGTCAACGCGAATC
agattcaaatcgaaagtggttAAAAAAAGTGTTCTAGC Run BLAST on NCBI transcript from alignment at sc0000403:56534..57424+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022024 ID=TCONS_00022024|Name=TCONS_00022024|organism=Clytia hemisphaerica|type=transcript|length=891bp|location=Sequence derived from alignment at sc0000403:56534..57424+ (Clytia hemisphaerica)
GTCAGTTTAATCGAAgaaatccaaagaaaacaaTCTCTTTTACCCTAAGG
CATTGACATTGATATATGTTATCCCCCTGAAAACATTTCTATCGAGTCAG
CAAGGCTCGTACCCAGTAATTCATGACGNCTGAAAACATTTCTACCGAGT
CAGCAAGGCTCGTACCCAGTGATTcatgaaaatcatcaaaaaaatttaac
accTACAAAAAAACACCTTGACCAAAACATGGGCTTAAGATATTTTATGT
ATACATATAATAACATAGTATGATAATATCATAACATAATAATAGTAAAA
ACTTTTTCCATGGTGGGGTTATATTATAAACAATATTATATATaggagaa
aatattaaaaacatgtTATAGTTTAAAACCATCCAATTATttacaacaat
aaaaaaaaatcaatgaccAGAAAATTTATATTACttttttcaaagtgaaa
aaaaatcaatttttcaaaaaagagaaaattttaaagCAAACGCCTTTGAA
ATCTTCCTTGAAATATCATGCAATGGGGAATTTAATCTAAACTCATACTG
CCCAATCCAAAGGTATAATTACCGCGTTAtgttatgctataaagatgaTA
ATGAGGTCTCACTTACATGCATTGATCAATAAAAAAACGTAAATATCTGG
AGAGACTTACAAATTTCTGTAGCAACACACATAAACGAGAAAGAGAACCT
TTTAATATGATGAAGTGCAACTGAAAAcattataaatttcttttttgata
taATAAGCCCCCGTAATCCTTTAATAAGTTTCACGCGAGCTACCAAAATG
AAGCCAGCGTCAGTTTCGCAGCGTCAGCGTCAGCGTCAGCGTCAACGCGA
ATCagattcaaatcgaaagtggttAAAAAAAGTGTTCTAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022024-exon-sc0000403-1491911889:56534..56637 | TCONS_00022024-exon-sc0000403-1491911889:56534..56637 | Clytia hemisphaerica | exon |
| TCONS_00022024-exon-sc0000403-1510915933:56534..56637 | TCONS_00022024-exon-sc0000403-1510915933:56534..56637 | Clytia hemisphaerica | exon |
| TCONS_00022024-exon-sc0000403-1575043694:56534..56637 | TCONS_00022024-exon-sc0000403-1575043694:56534..56637 | Clytia hemisphaerica | exon |
| TCONS_00022024-exon-sc0000403-1491911889:56691..57424 | TCONS_00022024-exon-sc0000403-1491911889:56691..57424 | Clytia hemisphaerica | exon |
| TCONS_00022024-exon-sc0000403-1510915933:56691..57424 | TCONS_00022024-exon-sc0000403-1510915933:56691..57424 | Clytia hemisphaerica | exon |
| TCONS_00022024-exon-sc0000403-1575043694:56691..57424 | TCONS_00022024-exon-sc0000403-1575043694:56691..57424 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403 | supercontig | sc0000403:56534..57424 + |
Blast
The following BLAST results are available for this feature:
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