|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022019 ID=TCONS_00022019|Name=TCONS_00022019|organism=Clytia hemisphaerica|type=transcript|length=981bp
GTCGTCAGGgatcataaatttttttataccTTGAATCACTTAGCATAGAG
AATTCAAGTCGAATTTTGCTACGCCACTCATACTTTAGAAAATAATAGCT
TGCATGCTTTTGAATTTTAGGTTATTTAGGTTAACTTTCAAGAACACCTG
TACAAgttctttttttaagaacatccaaaattttggagcCTTGGATAATC
TGAACTTTTAAAGCCTAAAAttattcttaatatgttcttattttcccaat
ttcgcgtttatttttgtccatttcgaAATCGGgcgttttagagtccgcaa
acccttaaaatgttcttagcatgttttgaacattttggccatcgaagcct
tatgttcttatatagattgttcttataaaaaacgtgtactaacATAAGAA
TTCTGACAGCCTTTGAGAGTGCATTAGCTCAGGCTTAGTTTTCTAAGTAA
TAATGTTCGAACATTTCCAACAATTGAAGaatcaaatgtggagcaagatc
gTTGTTTAATATTAGCCAGCTTGTACCCATCACACGCCGNGGCTTAGTTT
TCTAAGTAATAATGTTTGAACATTTCCAACAATTCAAGaatcaaatgtgg
agcaagatcgTTGTTTGTTATTAGCCAGCTTGTACCCATCACACGCCGTT
TTTATTGTCACTACATATCCAAGAGTTTACAAGAAACACGACGATCGAGA
ATTGGCTAGGTTGTAATTAACGTCGAGGAATCTTTGATCATAATCGTTCC
AAGTcttccagattttttttcgttagAAGGGGTGATCGGGACAGACATCG
ATTTCAGTTACAGATTAGTCAATTCGAAAATGGCCATTTTGGATGTGCGT
GTTGACATATCAGCTGTAACGAAAAAAGAGCAATATCAAATGATTAGTAT
TTGTGGCACTGCACTTCATGCTGTATCCAAAATGTCAGAAGAAATTTGAC
AATGTATTTCCTCGATGTGTTTGGGTACGCA Run BLAST on NCBI transcript from alignment at sc0000401:224912..225892 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022019 ID=TCONS_00022019|Name=TCONS_00022019|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at sc0000401:224912..225892 (Clytia hemisphaerica)
TGCGTACCCAAACACATCGAGGAAATACATTGTCAAATTTCTTCTGACAT
TTTGGATACAGCATGAAGTGCAGTGCCACAAATACTAATCATTTGATATT
GCTCTTTTTTCGTTACAGCTGATATGTCAACACGCACATCCAAAATGGCC
ATTTTCGAATTGACTAATCTGTAACTGAAATCGATGTCTGTCCCGATCAC
CCCTTctaacgaaaaaaaatctggaagACTTGGAACGATTATGATCAAAG
ATTCCTCGACGTTAATTACAACCTAGCCAATTCTCGATCGTCGTGTTTCT
TGTAAACTCTTGGATATGTAGTGACAATAAAAACGGCGTGTGATGGGTAC
AAGCTGGCTAATAACAAACAAcgatcttgctccacatttgattCTTGAAT
TGTTGGAAATGTTCAAACATTATTACTTAGAAAACTAAGCCNCGGCGTGT
GATGGGTACAAGCTGGCTAATATTAAACAAcgatcttgctccacatttga
ttCTTCAATTGTTGGAAATGTTCGAACATTATTACTTAGAAAACTAAGCC
TGAGCTAATGCACTCTCAAAGGCTGTCAGAATTCTTATgttagtacacgt
tttttataagaacaatctatataagaacataaggcttcgatggccaaaat
gttcaaaacatgctaagaacattttaagggtttgcggactctaaaacgcC
CGATTtcgaaatggacaaaaataaacgcgaaattgggaaaataagaacat
attaagaataaTTTTAGGCTTTAAAAGTTCAGATTATCCAAGgctccaaa
attttggatgttcttaaaaaaagaacTTGTACAGGTGTTCTTGAAAGTTA
ACCTAAATAACCTAAAATTCAAAAGCATGCAAGCTATTATTTTCTAAAGT
ATGAGTGGCGTAGCAAAATTCGACTTGAATTCTCTATGCTAAGTGATTCA
AggtataaaaaaatttatgatcCCTGACGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022019-exon-sc0000401-1491911889:224912..225892 | TCONS_00022019-exon-sc0000401-1491911889:224912..225892 | Clytia hemisphaerica | exon |
| TCONS_00022019-exon-sc0000401-1510915933:224912..225892 | TCONS_00022019-exon-sc0000401-1510915933:224912..225892 | Clytia hemisphaerica | exon |
| TCONS_00022019-exon-sc0000401-1575043694:224912..225892 | TCONS_00022019-exon-sc0000401-1575043694:224912..225892 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401 | supercontig | sc0000401:224912..225892 . |
Blast
The following BLAST results are available for this feature:
|
