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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021986 ID=TCONS_00021986|Name=TCONS_00021986|organism=Clytia hemisphaerica|type=transcript|length=323bp
agaattttcactgaagattTCTTCGTCTGAGTAATGAGAAGTTCTAGACT
GATCTTATCTACTCAAAAAAGCAATCAAGAGATATGTTGTGTCGataatc
tttcaaaaataatggAAAAGGGATTGCTATAGGATATTTCGGATGATGTA
CATTGATaatgaaagttttaaagatGTTTTGGTTTGGGGAGGAAATAATC
TCAGACGTGATTGAGAAGAGAAAATAGTTGAAGAAGTTGTTTTGAAGATT
GAAGCTGAAGattttttcagaaagtgaaatcaattcaaatttggtattta
TCGACTTTGGAAGCACAGTTCTT Run BLAST on NCBI transcript from alignment at sc0000401:109169..110934- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021986 ID=TCONS_00021986|Name=TCONS_00021986|organism=Clytia hemisphaerica|type=transcript|length=1766bp|location=Sequence derived from alignment at sc0000401:109169..110934- (Clytia hemisphaerica)
AGAATTTTCACTGAAGATTTCTTCGTCTGAGTAATGAGAAGTTCTAGACT
GATCTTATCTACTCAAAAAAGCAATCAAGAGATATGTTGTGTCGATAATC
TTTCAAAAATAATGGAAAAGGGATTGCTATAGGATATTTCGGATGATGTA
CATTGATAATGAAAGTTTTAAAGATGTTTTGGTTTGGGGAGGAAATAATC
TCAGACGTGATTGAGAAGAGAAAATAGTTGAAGAAGTTGTTTTGAAGATT
GAAGCTGAAGGTAAGATGGAATATGTTTTTTGAGTTTTCATTTTTTTTAG
ACACACCTGTATCACAGCCCCATTGGAAAATCTGGCAAAAATTTCATACC
CGGTAAGAAAGTACCCTGAAATCTTAGTCCTACTGGGAAATTGACTTATT
ATTTCATCCCCACTCGAAATTAAATGTTTAAATATTGCACTCCAAAACCA
CCCCCACTGGATTTTTTAACTTTCGAACAATATAATTTCTATCCCCATTG
AGATTTCAATAGGAATTTATATCCCCACTGAGGAAAAAAGTTCCACCGAG
GCTGCGAGACAGGGGTGTTTTTAGAAAGGCTGTAAATTTGCAGAGGCAAC
ATGTTATTCCCCTTTTATTTGACGTAGCTAAGAAAATACTTCACCATTTA
TTCTAATGATTGCTCTGATTTCTTTTCTTGGACACATAAGAAAATAATTG
AGCTCATTTAAGATTCAAAATACGGTCAGACTTAGTGCTTTCGAGAAAAA
AATTGACGCCTTTCGTACTTTAAGTGACACAATTCGAAATTTTAATGGCT
CTATTCCCCTGGGGATAGCTTTTGCGAGGTTACTGTTATGTCCGAGTCAA
AAATCGACCCTTTGAGAAAATTTTCAACTACATTTTGGGTGATTTTTGTT
ATAGTAAAATTATTTTTTGATCTGCATTTTTTTATTCGATGGTATCAATT
CCTCACCAATATCTCACCTTGGCAAATCTTTTCCTCTTACAGATTTTCCT
CATGTCAGTCTTTTGAAGGTTTTATTAGTTACTTACAAAATTTTTGAAGC
CTTCGGATGTTCTTAACTTTTTGAACTTTAAGCTTAGAAATGTTCTTAAA
ATGTTCTTATTTTGAGTATTTTTGTTCCTTTTTCTATGAAATTCGGTGTT
CTAGAGTCCGCCTTAAAATGTTCTTAACTTGTTCTTAACATTTTGGCCAT
CGAAGCCTTATGTTCTTATATAGTTTGTTCTCTTAAAAAAACGTGTATAA
ATTTTTACTCCAATTTTATTTGTACTACACTGGAAGCATATATTGAACAT
TGAGCGAGCAAACAGTCAATACCTTGCATCAAATATTGATGTAAAAAGCA
TACCTCTATTGACCATACTAAACATTGAAACAGCTATATACCGGAGTGCA
TATCGCAGCTGTTTGGAGGGTTACCATATAAGTCAGTCATACTCTCCTTC
GTTGTGTCTTTTATGTAAGATTTTGCTAGAGATTGATAATTTTCGTCTCT
TTTAGGCAATAAGATGAAGGGTGTTTACGCATTATAAAACACACTCCTTG
ACAGAGCTTTTAATGTTTTGGAGATGTTTTCATCTTGAGTGAACAGGAAG
TTTTTCAATACAAGCTACTGCAATCAATAACGCGTCTATGCAGACTATGT
ACCTTTCTATTGTATTTGATTTAAAAAATCTCTTCATTTTTCATATTTTT
TAGATTTTTTCAGAAAGTGAAATCAATTCAAATTTGGTATTTATCGACTT
TGGAAGCACAGTTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021986-exon-sc0000401-1575043694:110675..110934 | TCONS_00021986-exon-sc0000401-1575043694:110675..110934 | Clytia hemisphaerica | exon |
| TCONS_00021986-exon-sc0000401-1575043694:109169..109231 | TCONS_00021986-exon-sc0000401-1575043694:109169..109231 | Clytia hemisphaerica | exon |
| TCONS_00021986-exon-sc0000401-1510915933:110675..110934 | TCONS_00021986-exon-sc0000401-1510915933:110675..110934 | Clytia hemisphaerica | exon |
| TCONS_00021986-exon-sc0000401-1510915933:109169..109231 | TCONS_00021986-exon-sc0000401-1510915933:109169..109231 | Clytia hemisphaerica | exon |
| TCONS_00021986-exon-sc0000401-1491911889:110675..110934 | TCONS_00021986-exon-sc0000401-1491911889:110675..110934 | Clytia hemisphaerica | exon |
| TCONS_00021986-exon-sc0000401-1491911889:109169..109231 | TCONS_00021986-exon-sc0000401-1491911889:109169..109231 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000401 | supercontig | sc0000401:109169..110934 - |
Blast
The following BLAST results are available for this feature:
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