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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021946 ID=TCONS_00021946|Name=TCONS_00021946|organism=Clytia hemisphaerica|type=transcript|length=511bp
GAGGAATGAACAACTTTGCTTCTTTGAGTGATCTCCCAAGAAACGTGCAG
CAAATTAAGAATACACGTAAAACTaTTTGAGCACCAAAACAATCTGACAC
AACCACTGAGTTGCTCTTACTTACTGCATCCAACCCAGATGTGATTGCAA
ATCTACAATTTAATCCACATATCATATTTGTGGTTTACACAAATTCTATC
TTGGGTCACATAAAGGAGATGTGTACTGTTCCTGGAGACCTCCTCAGTAT
CTTACAAATagacaaaacttttaaagtcgGTGACTTTTTTGTCACCAGCA
CATGTTACCAGTATGGTAAAGTAAGAAAGATAGAGGACAACAAGGCGCCA
TGGATCCCTGGTCCAGCAATCTTCCACATAAAAGAAGATAAGTCAATCCA
CCAGCATTTGGCATCCACAATAAAACAGAAGAATCCTGCGATGAGGGATA
TTTTGTTTATGGGAATGGATAGGGAAAAAGCCATCGCTAACGGGTTTTTA
CAAGAGCTTCC Run BLAST on NCBI transcript from alignment at sc0000400:222108..223488- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021946 ID=TCONS_00021946|Name=TCONS_00021946|organism=Clytia hemisphaerica|type=transcript|length=1381bp|location=Sequence derived from alignment at sc0000400:222108..223488- (Clytia hemisphaerica)
GAGGAATGAACAACTTTGCTTCTTTGAGTGATCTCCCAAGAAACGTGCAG
CAAATTAAGAATACACGTAAAACTGTATGTTTACAAATTACTCTATTAAT
AGCTACCTTATTACACTTATATAACTAGTCAGTTATAGTATTAAATGCGG
GAGAAATGAGTGAGAGAATTTATTTATTAAGATTTTGTAATTAAAGGTAA
TCAATTAATGCAAATGGGTCATTTCAAAGTGTTTACATGGTATTTAATTA
ACACAACATATTCTCTAAGAATGTAAAATTCCAAGTTGCCGTTTATAATA
TATTATATGGAAAGTAACACGTTAAAATGCTTTTGATCAGTTGAAAGAAT
TGTAATGAAAAAATGAAATGCCCTACCTAAAGTAAGGGAAGAAATTTTCG
CGGGAATTTAATTTCGCGGTTGGTCAAATTATTTTTTTTCGCGAATTTAA
TTTGGCGGTTCATCGATTTTCGAAAAATTTGCGGGAATTTAATTTCGCGG
TTGCAGGATATTTTTGACCAAAAGCGTTATTAAATAAGCAAAAAACCTGT
TTTCTTTAAGGCTCGAAATAGTACGAATTTGGGGGAATGCGTGAATTAAA
TAAAATTTCGCGGGAATTTAATTTCGCGGATTGACGATTTTGTAAAATTT
TGTTCCCGCGAAAATTTCTTCCCTCAAGGTAGTTTGTATGATAAAAACTT
TTAGTGTTACATTTGGTGGTCAATTTAATGCTGTTTAAAGAGTGTATGAA
ATAACGGAGGTTTTTTTAACATGATAAATAATTAAGGTAGGAAAAATGAA
CGCAAGCATGTAATTAGTGCGGTTTTATTTAACGTGAGGTACAAGCAATT
CGCGTTAATAGCTTGAGTAGTTATATAAGTGTAATAAGGTGTGTCACAAA
AAAGCTTCCCGTATGAATATACCATTGTTCTTTTCTTTTTACAGATTTGA
GCACCAAAACAATCTGACACAACCACTGAGTTGCTCTTACTTACTGCATC
CAACCCAGATGTGATTGCAAATCTACAATTTAATCCACATATCATATTTG
TGGTTTACACAAATTCTATCTTGGGTCACATAAAGGAGATGTGTACTGTT
CCTGGAGACCTCCTCAGTATCTTACAAATAGACAAAACTTTTAAAGTCGG
TGACTTTTTTGTCACCAGCACATGTTACCAGTATGGTAAAGTAAGAAAGA
TAGAGGACAACAAGGCGCCATGGATCCCTGGTCCAGCAATCTTCCACATA
AAAGAAGATAAGTCAATCCACCAGCATTTGGCATCCACAATAAAACAGAA
GAATCCTGCGATGAGGGATATTTTGTTTATGGGAATGGATAGGGAAAAAG
CCATCGCTAACGGGTTTTTACAAGAGCTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021946-exon-sc0000400-1575043694:223415..223488 | TCONS_00021946-exon-sc0000400-1575043694:223415..223488 | Clytia hemisphaerica | exon |
| TCONS_00021946-exon-sc0000400-1575043694:222108..222544 | TCONS_00021946-exon-sc0000400-1575043694:222108..222544 | Clytia hemisphaerica | exon |
| TCONS_00021946-exon-sc0000400-1510915933:223415..223488 | TCONS_00021946-exon-sc0000400-1510915933:223415..223488 | Clytia hemisphaerica | exon |
| TCONS_00021946-exon-sc0000400-1510915933:222108..222544 | TCONS_00021946-exon-sc0000400-1510915933:222108..222544 | Clytia hemisphaerica | exon |
| TCONS_00021946-exon-sc0000400-1491911889:223415..223488 | TCONS_00021946-exon-sc0000400-1491911889:223415..223488 | Clytia hemisphaerica | exon |
| TCONS_00021946-exon-sc0000400-1491911889:222108..222544 | TCONS_00021946-exon-sc0000400-1491911889:222108..222544 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000400 | supercontig | sc0000400:222108..223488 - |
Blast
The following BLAST results are available for this feature:
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