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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021944 ID=TCONS_00021944|Name=TCONS_00021944|organism=Clytia hemisphaerica|type=transcript|length=562bp
CAGTGCTCGACTTTCGAATAAATTCATATAATTTTCGCACAATTAGTGAT
GAATAATTATTTCAGATGAGTCCTAATGACttcaattatcattagaagta
atttcaagaaatttactGTGTTGATCACAAAGATATCTTCGGATGTTGGT
GTGGAATTTGTGTTACACTTTCACTCAAACTAAATAGGAGATCACAAGTA
TGTAATTGATTTCAAGATTGGAGAAGAAGCGATAAAGCCAAAGACACCAA
GACACCCACCTGGACACACATGGTACGTTGAATTTTCCGATAAAGTTTTG
ATTACAGCTTTTAAAAAGTCTAAGTTTGACAAAGATCTAAACTtccacca
tcttgaaattatgattTTGCATGATTTTTTACTATCCAATGACACCATGT
ATTTACCGGCGATTCACCGTTTGACAAGTAACTTCCAAAAAATGATCGCA
TGTGAAACATATTCTTACCTTTGGTTTTCTTGAAATCATGATTTTGCAAG
ATTTTTTACTATCCAATGACACTATTTATTTACTGGCGATTCACCGTTTG
ACAAGTAACTTG Run BLAST on NCBI transcript from alignment at sc0000400:206415..207343- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021944 ID=TCONS_00021944|Name=TCONS_00021944|organism=Clytia hemisphaerica|type=transcript|length=929bp|location=Sequence derived from alignment at sc0000400:206415..207343- (Clytia hemisphaerica)
CAGTGCTCGACTTTCGAATAAATTCATATAATTTTCGCACAATTAGTGAT
GAATAATTATTTCAGATGAGTCCTAATGACTTCAATTATCATTAGAAGTA
ATTTCAAGAAATTTACTGTGTTGATCACAAAGATATCTTCGGATGTTGGT
GTGGAATTTGTGTTACACTTTCACTCAAACTAAATAGGTGAGTTGAAGGG
CTACAGACGTATGCTCGTTAGCTTTTATATACTTTTAGACGAAATCCACT
TGAACAGTTGAAAGCAATCTCAAAGTTGAGATATTTTTTAGGCTTATTTT
GTAAAAATCTTTGTATTTTCAGATTTATAATACTCTGTCTGCAAAATTGA
CATAGTGTCTCCTGACATAATAGTATGAAGTGGATTGTACATTTTTATTT
TGTGAAGCAGGCTGTGATCGGCGATAGATACAATTCTCATTTTCATCTTC
TGACTTGGTTTCAGTGTGACTGTAAAATTATAATATTGCCATTGGATGTA
TTTTTTATTTAAGAGATTGGGTGCCTTTCAATCTTAAATCTACCTTCTTT
TTAGGAGATCACAAGTATGTAATTGATTTCAAGATTGGAGAAGAAGCGAT
AAAGCCAAAGACACCAAGACACCCACCTGGACACACATGGTACGTTGAAT
TTTCCGATAAAGTTTTGATTACAGCTTTTAAAAAGTCTAAGTTTGACAAA
GATCTAAACTTCCACCATCTTGAAATTATGATTTTGCATGATTTTTTACT
ATCCAATGACACCATGTATTTACCGGCGATTCACCGTTTGACAAGTAACT
TCCAAAAAATGATCGCATGTGAAACATATTCTTACCTTTGGTTTTCTTGA
AATCATGATTTTGCAAGATTTTTTACTATCCAATGACACTATTTATTTAC
TGGCGATTCACCGTTTGACAAGTAACTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021944-exon-sc0000400-1575043694:207157..207343 | TCONS_00021944-exon-sc0000400-1575043694:207157..207343 | Clytia hemisphaerica | exon |
| TCONS_00021944-exon-sc0000400-1575043694:206415..206789 | TCONS_00021944-exon-sc0000400-1575043694:206415..206789 | Clytia hemisphaerica | exon |
| TCONS_00021944-exon-sc0000400-1510915933:207157..207343 | TCONS_00021944-exon-sc0000400-1510915933:207157..207343 | Clytia hemisphaerica | exon |
| TCONS_00021944-exon-sc0000400-1510915933:206415..206789 | TCONS_00021944-exon-sc0000400-1510915933:206415..206789 | Clytia hemisphaerica | exon |
| TCONS_00021944-exon-sc0000400-1491911889:207157..207343 | TCONS_00021944-exon-sc0000400-1491911889:207157..207343 | Clytia hemisphaerica | exon |
| TCONS_00021944-exon-sc0000400-1491911889:206415..206789 | TCONS_00021944-exon-sc0000400-1491911889:206415..206789 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000400 | supercontig | sc0000400:206415..207343 - |
Blast
The following BLAST results are available for this feature:
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