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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021904 ID=TCONS_00021904|Name=TCONS_00021904|organism=Clytia hemisphaerica|type=transcript|length=1126bp
NAAACTTTGGATACAAATTTACGAATAATTCCTATCCGTCATTGGGGGAT
ATATCGTCATACAATTTGATTTGAGATTTGAGGATACAAATTTACGAATA
ATTCCTATCCGTCATTGGGGGAATATATCGTCACACATTGATTTGAGATT
TGAGGATACAAATTTACGAATAATTCCTATCCGTCGTTGGGGAATATATC
GTCACACATTTGATTTGAGAATTTGATCTTTACACATTTGATTTTAGGAT
TTGAGAACTTTGGAGTACATTGTTACACATGATTTGGATACTTCAGACTT
GATTGAGAATTTGAGATTTACGACTTTTAACGAACGGgaacaaagttgat
attttctcggccccattggaaatttggccCCTACGACTAAAGAATACATC
GAAAATTGGTTACTTGAACGTTGAGAATTGTACGTATTTAGAAAGCAAGA
CATTTTGAATCGTCAAAATTGGGAAACTTTACTAGAACTGGAGATTTGTT
TGGGAAAACGTCGAACTTTAGAATCTTTTTTGCTGGAACTTTGAAAGAAG
TTTACTTTGGAAATTATTGAGAGATTCTGCTAAAGGAGACTTGTTTACgc
aagaaaacattttcaaaaaattcctctggaattttttttcgaacacATGG
AACTTTGTTTATGAGAGAGAGATATTTACAGAATGAATAACGAATCAATA
TAATGACGTCAAAAGGGCGTATTTGTATTTAGACCTCACCTGCTTTATGA
ACGTTTTATGAACTAGGATTTTACTCGATTTATTAGAACATTTTGTTACA
CTTTTTATAGGAACTTAGATTATTTTGGCAGGGTGAGTGTTGTGATTTAT
ATTTTCGGGGGGAATGTCGTGGAATAGAAATTATGATTGACAGTTTGACC
ACGTGACCAGTAGGGAAACCAGATAGAGAAGAAGAACCATCTAATAGAAA
TATACAGTCCTCCACTTATTTCGTTTCGGAcattatcgctaaaatataag
aacgttctccatcacacaggcttattacaaaaggtagttacaacgtataa
attaatcgtaatgacaaagaaaaaagagggagagctgaaaatacaatttt
gtgaacacgcacataaaactttctac Run BLAST on NCBI transcript from alignment at sc0000396:78078..79203 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021904 ID=TCONS_00021904|Name=TCONS_00021904|organism=Clytia hemisphaerica|type=transcript|length=1126bp|location=Sequence derived from alignment at sc0000396:78078..79203 (Clytia hemisphaerica)
gtagaaagttttatgtgcgtgttcacaaaattgtattttcagctctccct
cttttttctttgtcattacgattaatttatacgttgtaactaccttttgt
aataagcctgtgtgatggagaacgttcttatattttagcgataatgTCCG
AAACGAAATAAGTGGAGGACTGTATATTTCTATTAGATGGTTCTTCTTCT
CTATCTGGTTTCCCTACTGGTCACGTGGTCAAACTGTCAATCATAATTTC
TATTCCACGACATTCCCCCCGAAAATATAAATCACAACACTCACCCTGCC
AAAATAATCTAAGTTCCTATAAAAAGTGTAACAAAATGTTCTAATAAATC
GAGTAAAATCCTAGTTCATAAAACGTTCATAAAGCAGGTGAGGTCTAAAT
ACAAATACGCCCTTTTGACGTCATTATATTGATTCGTTATTCATTCTGTA
AATATCTCTCTCTCATAAACAAAGTTCCATgtgttcgaaaaaaaattcca
gaggaattttttgaaaatgttttcttgcGTAAACAAGTCTCCTTTAGCAG
AATCTCTCAATAATTTCCAAAGTAAACTTCTTTCAAAGTTCCAGCAAAAA
AGATTCTAAAGTTCGACGTTTTCCCAAACAAATCTCCAGTTCTAGTAAAG
TTTCCCAATTTTGACGATTCAAAATGTCTTGCTTTCTAAATACGTACAAT
TCTCAACGTTCAAGTAACCAATTTTCGATGTATTCTTTAGTCGTAGGggc
caaatttccaatggggccgagaaaatatcaactttgttcCCGTTCGTTAA
AAGTCGTAAATCTCAAATTCTCAATCAAGTCTGAAGTATCCAAATCATGT
GTAACAATGTACTCCAAAGTTCTCAAATCCTAAAATCAAATGTGTAAAGA
TCAAATTCTCAAATCAAATGTGTGACGATATATTCCCCAACGACGGATAG
GAATTATTCGTAAATTTGTATCCTCAAATCTCAAATCAATGTGTGACGAT
ATATTCCCCCAATGACGGATAGGAATTATTCGTAAATTTGTATCCTCAAA
TCTCAAATCAAATTGTATGACGATATATCCCCCAATGACGGATAGGAATT
ATTCGTAAATTTGTATCCAAAGTTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021904-exon-sc0000396-1491911889:78078..79203 | TCONS_00021904-exon-sc0000396-1491911889:78078..79203 | Clytia hemisphaerica | exon |
| TCONS_00021904-exon-sc0000396-1510915933:78078..79203 | TCONS_00021904-exon-sc0000396-1510915933:78078..79203 | Clytia hemisphaerica | exon |
| TCONS_00021904-exon-sc0000396-1575043694:78078..79203 | TCONS_00021904-exon-sc0000396-1575043694:78078..79203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000396 | supercontig | sc0000396:78078..79203 . |
Blast
The following BLAST results are available for this feature:
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