TCONS_00021898 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021898
Unique NameTCONS_00021898
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3249

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021898 ID=TCONS_00021898|Name=TCONS_00021898|organism=Clytia hemisphaerica|type=transcript|length=3249bp
TAAATaagtaaatatatttttagtaaaaatagtttctataatattgaatt
tcagcATAATCATAACCTAATGTTGTTTAGGCAAAGCTTGGATCACGATC
ATAAGATATCCACTATCAGGAGCAACAATTATCTCCTCTTTCTTGGTTCG
AACTCTTAAAAACAACATTTCATCTTGCGGGTCGATGTTATGTACAACGC
CTTCAGAAAGTGCACAAACTTTCCTGAAAAGACTGGCGTATAAGACGGTG
GTTGTGTTATCCAGTGTGGTGCGGATAGGGATACCATCTTCGTTGACGAT
GATACTACCAATGACGCCCTTGTGTTGTTCTATACGCTTCAATGTCTCCT
CTGGCGTCGATATTGGGCCGCTAGGTCCTGTATTGCTGGACATGGTTACT
GAAGGTTATTGATTGGTAGATGAGAAAGATCAAATATGAATGATGAAGTA
CAGAAACtttcgaaaatgaaaatttttgaacgcgTAGAAGTTTGAGATAt
gtatttgttttaaaattgacGTCAGATATTATACACTTTAACAATCTTAT
TGACGTCAAAATAATAACTTTCGATAAAAACGCCTATAACGAGTcaactt
tttttgttaattcccactaacacaagaaaaaaaacaagaattttttaata
ttttctcctTTTGAGTATTTGTGAAAAATATGGCGAGCGTGACTTTACCA
TCGATCGAACCTGTCAACAATAATGACAACCATCTAAAGAATCTTACTTA
TATTGTTCGTAAACCCAAGGGTGCAAACGCCCCACCGAGGGCAAGTCGTT
TAGGGCGTGAACGATTTTCAATCTCCTTACCAGGTGAAAATGGTAGCAAC
GAATTTGGAAGCAATGGAGCTTTTCCGAACATCAATGTCAGTTCTCTGGC
ACAGAATTCTGGTCATGACATCAAAATCATATCGAAATTGGAACATCTGG
AGTTAAAAGGACCAGTACACAGTCAACAGAGTTTACGAAATGTTTCATCA
GCCACGATATCCATGCTCAAGATTCAAGGCTTACCAGCTGGTCCAGTCAA
AGAAGAACAAATAAATGCTGTTCAAAATCTATTCAAAAATTTAGGTGAAG
CACCATCCATCATTGATGGTCGACTAGAAGTTGGAGACGATATTTGGGAT
GAATTTGAAGattccgaaaaattgaaaaataatctgGAAATGTTATTGGT
GTGCAAGAAAATGAACCTGCATTTTGAAGTTGCCAGGAGTCACAACCTAC
CGGGCTTCTTGGTAATTCCGAAATTCCATTGTATGAAATGTTATGAGTCA
TGGCTTACTAATCATCAAGTACCAACACACTGCGAAAACCCTGAAGAACC
AATACGAGGTGCCCCAATTGCTTTGGATGAAAGAGCACAGATATTTCTAA
AAGATCAAAATGTCAGCTATATTGAAATACAAGGGAATCAGGCTTTGATG
AATCGAAAATTTCGTAAACCGACTTTAACATCAAGTGCTTTACGAGCTAG
AATATTGCTCTCAAATCGGGACTCAAGGACCCGGCACGTCGACTCCATAA
CAGGAGTTGAGACAGTACCGACAAGACCTACGACAGGGAAACAAACGACA
ACACCAAAGCGACCTGACAGTGAGGCTAGTGCAATTGAAATTGCAAGCGA
TGAAAAAAGTCATCGTCCGTCACCCTTACTGCTAGCACGATCTCACGATG
AAGATTCAACTCACGGCATaacggatgttcttataaagtccAGTTACAGT
GGCCCTAATGATGGGATGAGGAAATATGGTGGTTTAACTAACAGCCAGGC
TAAGATCTTTGTCGATAAGAACAGTTTGACAAAAGTTGAAGAAGCAGAAC
AGAGACAAAAACATTATAATAGTGCTAGTAGAAATACAACATCACCTTTA
GctaaaaaatcaagtaaagATGGTCTCTTTGGAAAACGAGCCTCCAACAA
AAAGAATAAGAGGCAGCGTGGTAGCAAGGGCCAAGCGCGGAAGAATGGAT
CCAAGACACGTCTGGTGGATAAAACAGGCGCCACTGAAGAAACCTTGGTG
AATGTGAGCGATGAAGCCATGCCAAAAGGGGAATACAGTTATCGAAGAAT
GCTTATGGGTGGCGCTTCTAAAGGTCAAATGGGCGCAGGGGAGAGACGCC
CATCAGGTGTCAGCAACAACTTGATGACTCTCGATCTCGGTGATGAAGCA
AAAGATCCACGAGCGTCCACCAATAAAGCCAATGCCAACATAAGAGAAAG
AAAGACTCGAAAGAATTCGACCAATACAGCACCCGGTGCAAGGCGGGATT
CCTTAGACAGTGCAGCAAGTCGTTCAAGTCAACATGGTGGATCTCGAAGA
GGTAGTCTCCCTGACAACGAGAAACAGCAGTATAAAGTACAAGGTCAAGG
GCGAAATATTCAGCGTCAAGATGGGAAGCGAGGTGTAGGTTTTACTTACA
ATACATCCAGTAATGCACTTGGTTTAGGATTTTCTCAAACACCTAGTTCT
CAGGCCACGTCGCGTGGCAATGAGGGGTCTGGATCTGAGGGTgaagaaaa
taatgaagatGCTGACTCATCAAAAACTCAATCACGTGCACGATATGGTT
CACCAACGGGTCGAACAGACAGCGGACATTCACGTGAGGGTACATCACGG
TCGGGCATGGTGAAACGAAGAGGTATTTTAAAGACCAAGAATAGAGATGG
AGTTTACGGTGACCGGAGTGGATCACCTTTGCTGGATATGCAACGTAGAG
GTTCAGAACGAACAGGTTCTGGACATTTGGTGCGAATGAGTGATCATGGA
AGTGCCGGAAGTATATCCAGTGAAAGAAAAAGTTCTGCGCATGCACGATG
TTTTGATGGAAATGGCACCTCGTATGATTCTGCAGGGAATCTGGTTGGTA
GTGCAGACTGGATGAAACAAAGGTCTCCTAAAAGTCAGAATAGCCTTGGT
CCTGTTCAAAgcaagaaaagaaatattttcttcagtACACGATGGGCCAA
ACCACAAAAGGGCGAAGATCTAACGCCTTCAGAGAATGGGTTACGAACGC
CCACCCCGCCATCACAGTTTCCGAGATGTGATTTAACAGCTATAAAAATG
ATGAGTATGACAAGTCGCATTTCGTTTTCTTATTATCAGAATATACCAGG
ACCTTTAcgtaaaaataaagaaatgctGGCACAAGCAATGAACGGCAGAA
GGAAACCTAAAAAACGATAGAAATAAAAGATAGAATATTTAGATGtgaa
Run BLAST on NCBI

transcript from alignment at sc0000396:103540..110933-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021898 ID=TCONS_00021898|Name=TCONS_00021898|organism=Clytia hemisphaerica|type=transcript|length=7394bp|location=Sequence derived from alignment at sc0000396:103540..110933- (Clytia hemisphaerica)
TAAATAAGTAAATATATTTTTAGTAAAAATAGTTTCTATAATATTGAATT
TCAGCATAATCATAACCTAATGTTGTTTAGGCAAAGCTTGGATCACGATC
ATAAGATATCCACTATCAGGAGCAACAATTATCTCCTCTTTCTTGGTTCG
AACTCTTAAAAACAACATTTCATCTTGCGGGTCGATGTTATGTACAACGC
CTTCAGAAAGTGCACAAACTTTCCTGAAAAGACTGGCGTATAAGACGGTG
GTTGTGTTATCCAGTGTGGTGCGGATAGGGATACCATCTTCGTTGACGAT
GATACTACCAATGACGCCCTTGTGTTGTTCTATACGCTTCAATGTCTCCT
CTGGCGTCGATATTGGGCCGCTAGGTCCTGTATTGCTGGACATGGTTACT
GAAGGTTATTGATTGGTAGATGAGAAAGATCAAATATGAATGATGAAGTA
CAGAAACTTTCGAAAATGAAAATTTTTGAACGCGTAGAAGTTTGAGATAT
GTATTTGTTTTAAAATTGACGTCAGATATTATACACTTTAACAATCTTAT
TGACGTCAAAATAATAACTTTCGATAAAAACGCCTATAACGAGTCAACTT
TTTTTGTTAATTCCCACTAACACAAGAAAAAAAACAAGAATTTTTTAATA
TTTTCTCCTTTTGAGTATTTGTGAAAAATATGGCGAGCGTGACTTTACCA
TCGATCGAACCTGTCAACAATAATGACAACCATCTAAAGAATCTTACTTA
TATTGTTCGTAAACCCAAGGTAGGGCTCTCTACTTTTCGGTCCCAGACCT
CCAATAACATGATTTCTTACATAATTTATGTCCCAAGCTGGTATAGTGAC
AGGAAGAGCAAAATAACTTAACCTACCAGCAAGATTTGAAACTTATGTGA
AACTTATAGTTTACTCTCTTCCGGCTAAATTTAGAATTTACGTCAATACG
AAAACCAAATGCCATTCTATTGATTGAGAAAAAACAAAATTCCACAAGAG
TTTGAAATGCAAAGAAATTCCGATCAAGATATCCAAGATTTTTTCTGTCG
TTTTCATTTTAGGGTGCAAACGCCCCACCGAGGGCAAGTCGTTTAGGGCG
TGAACGATTTTCAATCTCCTTACCAGGTGAAAATGGTAGCAACGAATTTG
GAAGCAATGGAGCTTTTCCGAACATCAATGTCAGTTCTCTGGCACAGAAT
TCTGGTCATGACATCAAAATCATATCGAAATTGGAACATCTGGTAAGCAT
ATATATTTCTAGACGATATTATCGTCCGTTAGAGGGATAGTAAACGAACG
CGGGAAAAATATACGCAGTTGAGTCAGGGCGTCAAGGCAGTTTAAAGAAA
ATATAGTGGCGGTACAAGCGTAAAGGTTAACTATAAACACCTCCGACACT
GCTTACCCCACCCCAGGCTAACTACCCGCTCACAAATTTTCTAAGATATC
CTCTTTTTTAGTGATCTTGTGAAGACGATAGGATCGTCTAATATATTTCA
TTACTAATTGATATCTGACATAAAAAGGAGGCATGCCTCTATGCTGACAA
AGCAGAATAGACAAAAAGAATTCTCAAAATTTGTGCTCAAGCGGTGCTGA
AAGGGAAGAGATTTGTTCTTTCTTTTGTTAAGAAATGTTGCGTAAGCTAA
TGGTACATTATGGGATCCAGAAATGTTAAATGATTTCCTTTCTTGGTAAG
AATTTAGGATAAAAAGAAAAAGGGTAAGACTTATCATGTACTTTTTATCT
TTTCGTGATGTGAATATACTTTAAAAAAGTGGCTTCAAAAACATTTTTGA
GATCGCTTAGTTTATTCGAGCTAGAGAGATAATAGAGAGCCCACCATTTT
ATACCTTCCTCATTTAACCGAAATGACTTTGAAATAGAATTGAGCCAAAA
TGTTTGAGAAATGTGAAAAAGTGAAAAAGAAAATTTGAACTTTCAATTAG
TGTTTTAACTTGAAACGAAAATAAACCGTCTTATAGTAGGAAGTCGCTAA
AATGATTGTCTAAGCAAAAAGTTAATTGACAATAATTGAATTTTCATGAA
GATACGAAAAATGAAAATTTGAAAAAATGAAGATTCGATCAAAATTTTAT
CAAAACTCTTTGGGAAAGCGTAATTTGCTTACAACAGTATTCAGTGTAAA
ATTTACTGAACCTGAAAAATCACCGAAATGGTCTGGATGCCAATGTTGGC
TGCCCGGAATGCCAGGGCCAATCTGATGAGGAAGAAAGTAAGGGAGTATA
ATTTTCCTGGCAAATTTTTACAAGAAAGCCGGTAAAACCATTCAAATAGA
ACCGTTAAAATTCTTTACCAGCTGAGTTTTATAAAGAGGATATATCTTGC
AGGTTCAATTTTCATCCAAAGTTTGGGGAATGGGAGAATTCGAATTTGAA
TTTTGGGTCCCAGATACAGTCGCATTCAGATCAAGTGCCCCTCGGTACGA
AGATCTATTGTGTCAATTTTTGTATGTTTCACAAAAACAGTTTATTCAAA
TTTTTTACTTCAATAGGAGTTAAAAGGACCAGTACACAGTCAACAGAGTT
TACGAAATGTTTCATCAGCCACGATATCCATGCTCAAGATTCAAGGCTTA
CCAGCTGGTCCAGTCAAAGAAGAACAAATAAATGCTGTTCAAAATCTATT
CAAAAATTTAGTAAGTTTCGTTTAGTCACTGCCCAGATGGCACACAACGT
CCAAACAACGTCCATCTGACATTCANTGTCACTGCCCAGACGGCACCCAA
CATCCAAACAACGTCCATGTAACATTCATAACGTCCAAATGAAGTTATTT
GAACGTTAAAACAACGTTGTGTGTCAGCTGGGTGTATTATCCATTTTTAT
TTTGAGCTATCTTTGGGAGGAAAAGTATCTGCCTCAAATAAATCACCCAA
ACTGAGTAGGGGAGGGGTTGCACTCTTACGGTGTGACGGAATTGGCCCTT
TTTAATACGGTGTTACGGGAGGGATTTGACGAAAAAAGTGACGTGGGAAA
ACGGTATTTTAAAATCAGACGGTGACGGTATTTAGCGTTATTTTTTGTCA
TTATGGCGGTGTTTTAACCTCTATAAACCGGTGTAACGTTTTTATCATTT
TTTTCAATTTTTGGGATTCCGGGATTCAGCAAAGATTTTGACGGGAAAAC
AAACCCCTACGAACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCCCCCCCCCTGAGTAAAGGGAGAATGAAAAATTCCTACCATTAAAAAG
AAATACACTGGTATTTTTATTTATTATATCTATCTAATTGCATTTTGGAT
GATCGATTTTCTATCGAAACTGGCAAATCACCAGTTTATAACCAACTTAA
TATTTGGTCCATTTGACTTACCCCACTTTGAAATTCTCACCAATTCAATG
ACAGTGAGACAGGGGTGTTTTTTGAATATCACAACATTATATGCAGGGTG
AAGCACCATCCATCATTGATGGTCGACTAGAAGTTGGAGACGATATTTGG
GATGAATTTGAAGATTCCGAAAAATTGAAAAATAATCTGGAAATGTTATT
GGTGTGCAAGAAAATGAACCTGCATTTTGAAGTAAGCATTTTATTCAACA
GTATTAGTTAGGCTTGTGGACATTCGCACAAAATTCTCTTTCTAACCACT
GCATTTTAAATTGAATACCATGTTTTATTGGATAAATTATGCAAAGGCTA
CATTACTGGTCTAAACGCCCAAGGATATGTGGCACCAAGCCAAGAAGACT
AATCCCAGTCGTTCTGGTGTAAAGTGTCAACAACATTAAGTGGGGTTTAA
AACACATAATCTAATATTTTTTAGGTTGCCAGGAGTCACAACCTACCGGG
CTTCTTGGTAATTCCGAAATTCCATTGTATGAAATGTTATGAGTCATGGC
TTACTAATCATCAAGTACCAACACACTGCGAAAACCCTGAAGAACCAATA
CGAGGTGCCCCAATTGCTTTGGATGAAAGAGCACAGATATTTCTAAAAGA
TCAAAATGTCAGCTATATTGAAATACAAGGGAATCAGGCTTTGATGAATC
GAAAATTTCGTAAACCGACTTTAACATCAAGTGCTTTACGAGCTAGAATA
TTGCTCTCAAATCGGGACTCAAGGACCCGGCACGTCGACTCCATAACAGG
AGTTGAGACAGTACCGACAAGACCTACGACAGGGAAACAAACGACAACAC
CAAAGCGACCTGACAGTGAGGCTAGTGCAATTGAAATTGCAAGCGATGAA
AAAAGTCATCGTCCGTCACCCTTACTGCTAGCACGATCTCACGATGAAGA
TTCAACTCACGGCATAACGGATGTTCTTATAAAGTCCAGTTACAGTGGCC
CTAATGATGGGATGAGGAAATATGGTGGTTTAACTAACAGCCAGGCTAAG
ATCTTTGTCGATAAGAACAGTTTGACAAAAGTTGAAGAAGCAGAACAGAG
ACAAAAACATTATAATAGTGCTAGTAGAAATACAACATCACCTTTAGCTA
AAAAATCAAGTAAAGATGGTCTCTTTGGAAAACGAGCCTCCAACAAAAAG
AATAAGAGGCAGCGTGGTAGCAAGGGCCAAGCGCGGAAGAATGGATCCAA
GACACGTCTGGTGGATAAAACAGGCGCCACTGAAGAAACCTTGGTGAATG
TGAGCGATGAAGCCATGCCAAAAGGGGAATACAGTTATCGAAGAATGCTT
ATGGGTGGCGCTTCTAAAGGTAAGTTTCGTTGAAGATTCGTTCAGTATGC
AATAATTTCCTTCCAATACTAAAATGATAGGATTATCACCGTCTTTGTTG
TCTTTTTAACCCGGTATATGAGAAACATGAGGAGAATTTGAGCTACTGGA
GGGTGCAATATTCATGAAATCATAGCCAGTCTCTTTATTCACTTTTTAAA
GATTTCTACAGTAAAATGTATCAGTGAAATGGAAGATTTTTGCACATTGG
CCAACATTGTTCCTACGTAGTGCAGTTAACAGAAATACAGATCACTTCAA
CGGATCTTTACTTCTTTTAGGTCAAATGGGCGCAGGGGAGAGACGCCCAT
CAGGTGTCAGCAACAACTTGATGACTCTCGATCTCGGTGATGAAGCAAAA
GATCCACGAGCGTCCACCAATAAAGCCAATGCCAACATAAGAGAAAGAAA
GACTCGAAAGAATTCGACCAATACAGCACCCGGTGCAAGGCGGGATTCCT
TAGACAGTGCAGCAAGTCGTTCAAGTCAACATGGTGGATCTCGAAGAGGT
AGTCTCCCTGACAACGAGAAACAGCAGTATAAAGTACAAGGTCAAGGGCG
AAATATTCAGCGTCAAGATGGGAAGCGAGGTGTAGGTTTTACTTACAATA
CATCCAGTAATGCACTTGGTTTAGGGTTTTCTCAAACACCTAGTTCTCAA
GCCGCGTCACATGGCAATGAGGGGTCTGGATCTGAGGGTGAGGAAAATGA
CGAGGATGCTGACTCGTCAAAAACTCAATCACGTGCACGATATGGTTCAC
CAACGGGTCGAACAGACAGCGGACATTCACGTGAGGGTACATCACGGTCG
GGTATGGTGAAACGAAGAGGTATTTTAAAGACCAAGAATAGAGATGGAGT
TTACAGTGATCGGAGTGGATCACCTTTGCTGGATATGCAACGTAGAGGCT
CAGAACGAACAGGTTCTGGACATTTGGTGCGAATGAGTGATCATGGAAGT
GCCGGAAGTATATCCAGTGAAAGAAAAAGTTCTGCGCATGCNGTCCAAGA
CACGTCTGGTGGATAAAACAGGCGCCACTGAAGAAACCTTGGTGAATGTG
AGGGATGAAGCCATGCCAAAAGGGGAATACAGTTATCGAAGAATGCTTAT
GGGTGGCGGTTCTAAAGGTAAGTTTCGTTGAAGATTCGTTCAGTATGCAA
TAATTTCCTTCCAATATTAAAATGATAGGATTATCACCGTCTTTGTTTTC
TTTTTAACCCGGTATATGAGAAACATGAGGAGAATTTGAGCTACTGGAGG
GTGTAATATTCATGAAATCATAGCCAGTCTCTTTATTCACTTTTTAAAGA
TTTCTACAGTAAAATGTATCAGTGAAATGGAAGATTTTTGCACATTGGCC
AACATTGTTCCTACGTAGTGCAGTTAACAGAAATACAGATCACTTCAACG
GATCTTTACTTCTTTTAGGTCAAATGGGCGCAGGGGAGAGACGCCCATCA
GGTGTCAGCAACAACTTGATGACTCTCGATCTCGGTGATGAAGCAAAAGA
TCCACGAGCGTCCACCAATAAAGCCAATGCCAACATAAGAGAAAGAAAGA
CTCGAAAGAATTCGACCAATACAGCACCCGGTGCAAGGCGGGATTCCTTA
GACAGTGCAGCAAGTCGTTCAAGTCAACATGGTGGATCTCGAAGAGGTAG
TCTCCCTGACAACGAGAAACAGCAGTATAAAGTACAAGGTCAAGGGCGAA
ATATTCAGCGTCAAGATGGGAAGCGAGGTGTAGGTTTTACTTACAATACA
TCCAGTAATGCACTTGGTTTAGGATTTTCTCAAACACCTAGTTCTCAGGC
CACGTCGCGTGGCAATGAGGGGTCTGGATCTGAGGGTGAAGAAAATAATG
AAGATGCTGACTCATCAAAAACTCAATCACGTGCACGATATGGTTCACCA
ACGGGTCGAACAGACAGCGGACATTCACGTGAGGGTACATCACGGTCGGG
CATGGTGAAACGAAGAGGTATTTTAAAGACCAAGAATAGAGATGGAGTTT
ACGGTGACCGGAGTGGATCACCTTTGCTGGATATGCAACGTAGAGGTTCA
GAACGAACAGGTTCTGGACATTTGGTGCGAATGAGTGATCATGGAAGTGC
CGGAAGTATATCCAGTGAAAGAAAAAGTTCTGCGCATGCACGATGTTTTG
ATGGAAATGGCACCTCGTATGATTCTGCAGGGAATCTGGTTGGTAGTGCA
GACTGGATGAAACAAAGGTCTCCTAAAAGTCAGAATAGCCTTGGTCCTGT
TCAAAGCAAGAAAAGAAATATTTTCTTCAGTACACGATGGGCCAAACCAC
AAAAGGGCGAAGATCTAACGCCTTCAGAGAATGGGTTACGAACGCCCACC
CCGCCATCACAGTTTCCGAGATGTGATTTAACAGCTATAAAAATGATGAG
TATGACAAGTCGCATTTCGTTTTCTTATTATCAGAATATACCAGGACCTT
TACGTAAAAATAAAGAAATGCTGGCACAAGCAATGAACGGCAGAAGGAAA
CCTAAAAAACGATAGAAATAAAAGATAGAATATTTAGATGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012287XLOC_012287Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021898-exon-sc0000396-1575043694:110165..110933TCONS_00021898-exon-sc0000396-1575043694:110165..110933Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1575043694:109692..109871TCONS_00021898-exon-sc0000396-1575043694:109692..109871Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1575043694:108274..108417TCONS_00021898-exon-sc0000396-1575043694:108274..108417Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1575043694:107253..107387TCONS_00021898-exon-sc0000396-1575043694:107253..107387Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1575043694:106115..107009TCONS_00021898-exon-sc0000396-1575043694:106115..107009Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1575043694:103540..104665TCONS_00021898-exon-sc0000396-1575043694:103540..104665Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:110165..110933TCONS_00021898-exon-sc0000396-1510915933:110165..110933Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:109692..109871TCONS_00021898-exon-sc0000396-1510915933:109692..109871Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:108274..108417TCONS_00021898-exon-sc0000396-1510915933:108274..108417Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:107253..107387TCONS_00021898-exon-sc0000396-1510915933:107253..107387Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:106115..107009TCONS_00021898-exon-sc0000396-1510915933:106115..107009Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1510915933:103540..104665TCONS_00021898-exon-sc0000396-1510915933:103540..104665Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:110165..110933TCONS_00021898-exon-sc0000396-1491911889:110165..110933Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:109692..109871TCONS_00021898-exon-sc0000396-1491911889:109692..109871Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:108274..108417TCONS_00021898-exon-sc0000396-1491911889:108274..108417Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:107253..107387TCONS_00021898-exon-sc0000396-1491911889:107253..107387Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:106115..107009TCONS_00021898-exon-sc0000396-1491911889:106115..107009Clytia hemisphaericaexon
TCONS_00021898-exon-sc0000396-1491911889:103540..104665TCONS_00021898-exon-sc0000396-1491911889:103540..104665Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000396supercontigsc0000396:103540..110933 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.0186546	0	0.0210699	0	0	0	0	0	0	0	0	0.166769	0.0953343	0.1272	0.104268	0.206059	0.0718469	0	0.0446107	0.11487	0.246045	0.0160023	0	0	0.0134991
Blast
[Close]
BLAST of TCONS_00021898 vs. Swiss-Prot (Human)
Match: DLRB2 (Dynein light chain roadblock-type 2 OS=Homo sapiens GN=DYNLRB2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.632e-30
Identity = 54/88 (61.36%), Postives = 71/88 (80.68%), Query Frame = -1 
Query:   88 EETLKRIEQHKGVIGSIIVNEDGIPIRTTLDNTTTVLYASLFRKVCALSEGVVHNIDPQDEMLFLRVRTKKEEIIVAPDSGYLMIVIQ 351
            EETLKRI+ HKGVIG+++VN +GIPIRTTLDN+TTV YA L   +   ++  V +IDPQ+++ FLR+R+KK EI+VAPD  YL+IVIQ
Sbjct:    5 EETLKRIQSHKGVIGTMVVNAEGIPIRTTLDNSTTVQYAGLLHHLTMKAKSTVRDIDPQNDLTFLRIRSKKHEIMVAPDKEYLLIVIQ 92
The following BLAST results are available for this feature:
BLAST of TCONS_00021898 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLRB22.632e-3061.36Dynein light chain roadblock-type 2 OS=Homo sapien... [more]
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