|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021853 ID=TCONS_00021853|Name=TCONS_00021853|organism=Clytia hemisphaerica|type=transcript|length=1283bp
AAACTactaaaataatgtttttccTTTGAAGAGATAATTATTTGGATGAG
GGTGTTTGGAGTTTATATCTCATAGTAGATCTTTAACAAGGGAACTCATA
GAACTGAcaatccaaaaaaataatactacATATATACAGCTGCATAAACT
ACgcttaaaaaattataaaaattgaattatagTTACAAAACACACCATAA
TAAACAATcctttaatttttcattaaatattaATCATATTGTTTTATTTG
TTGAAAATAGCCAACATTTATTAGACGATGATCTCACATATCTACCGAGA
AATTTCAATGTTGACAATTTGGACAGAATTCACAAAAAAAGTATGGCATT
CTAATTTTGTTTAAGATTTCAATTAATAGTATATTNTATCTACCGAGAAA
TTTCAATGTTGACAATTTGGACAGAATTCACAAAAAAAGTATGGCATTCT
AATTTTGTTTAAGATTTCAATTACTCTCGGGAACCTAATAGCCgaggggt
ttggaataagcgggggggttggaaaaaatctcaaaacttaataagcgggg
ggggtaggaataaaaatgtcctgggtggaaaatttttgaaaaggaggcta
atacagcagaattaggacaaaagagagaactttcaaaaacattttcccaa
aaattaatacgcgggggggttggaataagaatgtcctgggtggaaaattt
tcgaaaaattaattagcggggggacggctattaggtaccgaGAGTAATAG
TATATTAAGAAAGTTAGTCAAAAGATTTCCCACAAACAGTTAGTCACATT
AGCATTCCACcgaaatgtgtatcaaagattaatgctgccaTTTTGCACTA
TATCGGTTACTTGAAGCAAGAAAATGCGTCGCAATACTTCTAATAggatt
catgaaaaataaactgacgctttttaatgaaattaatatttctatgagaa
attaccaaaattttgagccatagatgaaaaaatttgagctgagccaacct
tgaaaactaatttgaagagcaaaaacttctcaagaaaaaaatatacgGGG
GAGAAGACACCCACCTAGATCCATGCACCAACGGATAGGAACCTCAATAT
CTCCGTTATATTTTGAAAAGGAATTTTTCCAGAAATTATCAGTCGGTCGG
ACGacaaacacaagttatttgtgattgtgGCTTAAACCAATCTAGGTATT
GGTAAACAATGACTGTCGTCAGTAAAATCTGTAAAGTTATCGGAAATCGA
ACGAGTCACTACATCCGGGAGGTCACATATCTC Run BLAST on NCBI transcript from alignment at sc0000395:101909..103191 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021853 ID=TCONS_00021853|Name=TCONS_00021853|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at sc0000395:101909..103191 (Clytia hemisphaerica)
GAGATATGTGACCTCCCGGATGTAGTGACTCGTTCGATTTCCGATAACTT
TACAGATTTTACTGACGACAGTCATTGTTTACCAATACCTAGATTGGTTT
AAGCcacaatcacaaataacttgtgtttgtCGTCCGACCGACTGATAATT
TCTGGAAAAATTCCTTTTCAAAATATAACGGAGATATTGAGGTTCCTATC
CGTTGGTGCATGGATCTAGGTGGGTGTCTTCTCCCCcgtatatttttttc
ttgagaagtttttgctcttcaaattagttttcaaggttggctcagctcaa
attttttcatctatggctcaaaattttggtaatttctcatagaaatatta
atttcattaaaaagcgtcagtttatttttcatgaatccTATTAGAAGTAT
TGCGACGCATTTTCTTGCTTCAAGTAACCGATATAGTGCAAAAtggcagc
attaatctttgatacacatttcgGTGGAATGCTAATGTGACTAACTGTTT
GTGGGAAATCTTTTGACTAACTTTCTTAATATACTATTACTCtcggtacc
taatagccgtccccccgctaattaatttttcgaaaattttccacccagga
cattcttattccaacccccccgcgtattaatttttgggaaaatgtttttg
aaagttctctcttttgtcctaattctgctgtattagcctccttttcaaaa
attttccacccaggacatttttattcctaccccccccgcttattaagttt
tgagattttttccaacccccccgcttattccaaacccctcGGCTATTAGG
TTCCCGAGAGTAATTGAAATCTTAAACAAAATTAGAATGCCATACTTTTT
TTGTGAATTCTGTCCAAATTGTCAACATTGAAATTTCTCGGTAGATANAA
TATACTATTAATTGAAATCTTAAACAAAATTAGAATGCCATACTTTTTTT
GTGAATTCTGTCCAAATTGTCAACATTGAAATTTCTCGGTAGATATGTGA
GATCATCGTCTAATAAATGTTGGCTATTTTCAACAAATAAAACAATATGA
TtaatatttaatgaaaaattaaaggATTGTTTATTATGGTGTGTTTTGTA
ActataattcaatttttataattttttaagcGTAGTTTATGCAGCTGTAT
ATATgtagtattatttttttggattgTCAGTTCTATGAGTTCCCTTGTTA
AAGATCTACTATGAGATATAAACTCCAAACACCCTCATCCAAATAATTAT
CTCTTCAAAggaaaaacattattttagtAGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021853-exon-sc0000395-1491911889:101909..103191 | TCONS_00021853-exon-sc0000395-1491911889:101909..103191 | Clytia hemisphaerica | exon |
| TCONS_00021853-exon-sc0000395-1510915933:101909..103191 | TCONS_00021853-exon-sc0000395-1510915933:101909..103191 | Clytia hemisphaerica | exon |
| TCONS_00021853-exon-sc0000395-1575043694:101909..103191 | TCONS_00021853-exon-sc0000395-1575043694:101909..103191 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000395 | supercontig | sc0000395:101909..103191 . |
Blast
The following BLAST results are available for this feature:
|
