TCONS_00021820 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021820
Unique NameTCONS_00021820
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1643

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021820 ID=TCONS_00021820|Name=TCONS_00021820|organism=Clytia hemisphaerica|type=transcript|length=1643bp
TGGGTCTCATACATATTTCATATTCTATTGTTTAATCGACAATATTTGCT
GAAAAGGGCAAGAATTGCCATTTTTACCTAATAGACCCCACTGTTTCCGT
TCAGGTTCGCActtcaaaggaaaattaaaaaaaaaaccgtgTATATTTAT
CATCCTGATCACATCACCAAAATCACATTTGTTCACAATGAGTGAGAATA
ATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAAGCTTTTTACTCGA
CAGaTTAATGGTTCAttcaaattgaagaagaaatttcataaacaccgtct
ttttgaaaaatgcccCAATCGTCTTCAGATTccactgaaaaatatatttg
atgcCAAAACTTTCATGAAAGGGCATATTGCTATTGGATTCACTGAGGAT
GGAAGATATTTGTTGACTTATGTTTCTAACATTAAGTTTCAATTATCAGA
CACTTCTGTTTGCTCTTATCAATATGTCCtgcattggtggaaatttgatc
tTTGGAATAAACTACAAAAGGTATATGAAGTTGAATTATTTGCAAAGGAA
ACAATTTCAAACGTCAGGATTCTGCGACTGATTATATTGTGGTTCATGCA
TCTCTTGTCAATACGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATC
AATCGTCCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTG
TCCATTTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGACCACT
ATatctttgaaaagaaagaatgTTATACTTTTAAATTCTGGAGATATGTT
GTTTGCCATTCTGATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAG
GAAAGGATATACAGACAAGATTGTGTTACTGCCAGCAACGCCAACAAGAC
GTGCTTGCAAACCAAAGCAACATAGATGTCAATTATGACGACTCGACTGA
TTATATTTCATTCATAAATCAAGGATTTAATACAATAAATGATAACGATT
CGCAAACATCCCTTCCTGACTCTCCTTTTGATTGTATGACAACTGTAATA
CCATGTGCAATTACTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTA
TGAACACAGATGCTTTCGACATGCTGATAAAGGTTAGGCTCATTGAGTTT
AGATTCTATAGATGTATTTatgcttttatatttttgttgttttctacCCT
GCACCATATATGGCTAGGTACTAAAATGACTCTTTAGAAGGTCCAGTGTG
ATAGTGGTCAAGTGGTAGCATGCTTGAATACTTGCTGTCGATCAGTCAGT
GATGGTAAACATCTGTCACAGGTCAGTAAATGTTATGTTAAGGTAACTAC
AATACAATATCTCTCCAATAAAACAATGAACAATATCTCTCCAATAAAAC
AATGAACAGTATTTATTCAATAACACAAGTAACGTTAActataaaacaat
aaaacaatgTACAATTTCACTTGTATAATTCCAAGCTCCTCCACAACCAT
TATTTTGTTAGTTATTGGTAGTCTAAAGGTAAAAGTATCACTATGGATTC
TTGagattaatgatttttttttttacctttttcaaaTCGTATACCCTTCT
TGGGAATGTCCTGAAAACTTCAGGGTCATTGCATAAGTATTTG
Run BLAST on NCBI

protein sequence of TCONS_00021820-protein

>TCONS_00021820-protein ID=TCONS_00021820-protein|Name=TCONS_00021820-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
MSENNNRKLSPYPIPAKLFTRQINGSFKLKKKFHKHRLFEKCPNRLQIPL
KNIFDAKTFMKGHIAIGFTEDGRYLLTYVSNIKFQLSDTSVCSYQYVLHW
WKFDLWNKLQKVYEVELFAKETISNVRILRLIILWFMHLLSIRILKAMEE
CVMYQSSLNITRRNLNRINIVSISNMNCYHLIHHF
Run BLAST on NCBI

transcript from alignment at sc0000395:8200..17779-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021820 ID=TCONS_00021820|Name=TCONS_00021820|organism=Clytia hemisphaerica|type=transcript|length=9580bp|location=Sequence derived from alignment at sc0000395:8200..17779- (Clytia hemisphaerica)
TGGGTCTCATACATATTTCATATTCTATTGTTTAATCGACAATATTTGCT
GAAAAGGGCAAGAATTGCCATTTTTACCTAATAGACCCCACTGTTTCCGT
TCAGGTTCGCACTTCAAAGGAAAATTAAAAAAAAAACCGTGTATATTTAT
CATCCTGATCACATCACCAAAATCACATTTGTTCACAATGAGTGAGAATA
ATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAAGCTTTTTACTCGA
CAGGTAAGTCAATTGTTCTACAATGCCTTTTAGACAATGTATTTTGTATT
TATTTATTTTAGCCTAACTCGTCAGTCAGACTTATTTTAGTACTAAGAAC
TTCGTATAAGTAACCCTAAATAACGAATTTTCGGCAGCCGGTTTGGCCTA
GTGGATAGGGCATTGGTTTCGAAACCTATAGGTTCCCGGTTCGAGACCCC
CTTTGGTCACTATTCAACTTGAAAAAAATTCTAAGTCCAGCCGGATGCAT
CTGAAGCTTCAGCCGAATGTCTTTGATAGGTACTGTACCATTAGTTAGGC
GACAACAAAAGTTGGACCCCTCCAATGGACCCCCAAAATGGACCCCAAAA
TGGATTCCCAAATGGAACCCAAAATGGATTCCCAAAAATGGAACCGGCTG
GTTCGGGCTTAGAGGTAATTCCCTCTGTTGAGGATGGAATGATTTAAAAA
TTAGAAATACAAAAAAAAACGTAAATTTAAACCAGACGGTGTCAATCAAA
CACCTTCGAACAAAAATTGCAAATCGAACCACTCGAACGTAATTGATCGA
ATAAATGCGATTCGATTGTTGAACGTAATAGAATCTCAATCGAACGGCCG
ATTCCTGGGTAATATTTGATTGTGTTCGATTGCGTTTGACAGTATATAGT
CATCTGGGGTAAAAACGGGACGAAATCGACGAACCTTTCCATATCTCAGG
AACTTCAAAAGCTACAATCATGATTTTTGGCCAGCAACTCCCTCTAATGG
TCATCTATCAACCCTCTTAATGGTTTAAACTTATGACTTTTAGTTTTCGC
AAAATATTCACGGATATGCGTCCCGTAAATACCCCGGATTTTGGGGTAAA
AACGGGACACCCCAGGGTAAAAACGGGACACCCCAGGGTAAAAACGGGAC
ACCAACATAGAAAAATTTTCACTGGTTAAATACGGGACACCTTTTTTTCA
AAAACGGCACCCTGTACAAACTTGCGACTTTGGGCAGGTCAAAATAGGGT
TGTTTACTAGTCTCTATGACCCAAACATGTAGCGCCTGCATTTAGTACGG
CGTTTATTCTAAGTCGAGAAAAAAGCGTTCTAGAAATGAAAAATCAACGT
TTCAACCACCAAGAAACATCGTGGTGTATTCTGATGTAGAGGAATGAAGC
TGATCAAAGTATGGATTTTCATTCTTCATTCTTTTCATTTTTCATTTTTC
ATTCTCAATTTCAAGCCAAGATATCTTAGCAACGGGGTGCTCGCTCATAG
TTACAGGGGTTTGTGCAAAAAACTAAACATAGAAAAGTTTCCAAATCCCC
CATTTCAATTTTAAATGCAGTGAAAAACGGTTTGTGTAAAACGCAGGTCA
CAGGTCACAGGTCGTAGGTCACAGGTCACAGGTCAGTGATGACAGGTTAA
CTCTAATCAATGTCATTGCAGAGGAAAATGTTTGGAAAACACAAAGAATC
ATCAAAACATAATTCTCAAGCAATTTCATCCATATATATAAAACCATTTC
AAACATCAAAATTTAACCATGTGCTTTTATCGATCTTTCGCAGTTTGCGC
CGTGTATAACGCAGACCAGAAAATATTTGACACTATATTATACGTGTAAC
AGGTATATTACATATTGTAATGTTATATGATGGTTACATATAATAAAACA
AATCTTCTGATTGGTGTAATTTTATATCCAGCCATATTGTTATAATCACA
TTCGGCATGCTGAATATTTTTGGTGCTTTTCTCTTGTAAGACATGATATT
TTGTAATTCTGTCAATATTTTTGTCAAAAATTGTCATTAAGTCATNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAG
AGACCAATTTCGTTTTTGTTGCAGATTTCGATATAAACTTAACTCAGGGA
TTACTTGTCAATGTGCATGTGCACAATGTGTTGTGTCAACTTGTCAGCAT
TGTATTGTTGTAAAGGGAAAATAAAAGAGGTAAGACTAGCCTAGTCTCTA
ATCCTGACATAGGAGTTTAAGTTTAGACTGTTTGAGTAAGGTTAGATTGG
TTCGATTGATAGTTGACTATATTCGATTGGTTCGATTGATTGTCAATTAC
ATTCGATTAATCTTCAATTTCGTTCTATTATGATTATATGTTCGATGAGT
TTGATTGCGATTAAATTAAATTGGATCACTTCGTTTAGAGCTTTTTAGCG
TGAACGGCCGAGCGCTACATAATCAAATACAATCAAACATAATCAAAGCA
ATCGAACAGCAAATCCTGGGTAATATTTAATTGCGATAATCATGGTAGTG
AGATAGATTAGTTTAAAGTGCGGTCCAAATTGGGACAAAAAATGATCGTA
AAGCAAAGAACTAAGAATTGTCTTGTGGTTATAACTCTTGACTGCTTGCT
CTAGCGGGCTGAAAATTTACACAATCGTCCAGCAAGGCAGGGTGATGTGA
TATTCCTAAGAAACAGAATTAAAAGGGTCCTTAAAATGACAATACATTGT
CCTGTAACACAAAAAGTATGGACAACATAATGCCTATTATGGGACAAAGT
AAAATAAAAGAATTGGAAAATTTCTGACTTCACACTTGATTTTTCTGATT
TTTTGCTCAATGATGCAAAATGGTAACTAAATCCCAAATGTTGGGTAAAT
TTCTTGTTTTTAATTTGTTCAAAAACTAATATCAAAACTAATATCAAAAA
TGTGAAAAGTGAATTATTTTGAATTTTTTTTATTGAAATGTCAGACATAG
TGTGAACCCCCCTTTTTTAAGTGGGGAATCCAACTTTTCAAGAAAGGCTT
TATAGGGGGATAAGAGATTTTCCGAGTAAAATGAGGGGTTTGAGTTTTTA
GGGGGTATTGAATAAAAATAGGGGGATAACAACTTTTTGGTAAAAATATG
TATTATATCTTAAATTGGTCAAAGAATTGGGTATAGTCCAACAAGATAGC
AATGTAAATGAGATCATGTATTTTATAATTTTTTCGCTGCTAATTTTCAA
AGTCAAAATGGTATTGCATCCTTCATCATTTCATTATAGACCGTGGCCAA
GGGCTCACAATATTTCACTTTTCTCAAAATGTAATAAACTTGTGATATGT
TTCTTACTCAAATTGAAGGTTAAAAAGACTGGCAAGCAATAAAAGAAAAA
AGATTAGTGTGAATATCTGACGTAAATTAAAATTTATGATCCAGACAGTT
TGCTGGTCCTATAAGAGGCACTTTTCCAGGCATGAGCATTTTGAATAAAT
GTTGTAAAAATTCTTATTTTAGATTAATGGTTCATTCAAATTGAAGAAGA
AATTTCATAAACACCGTCTTTTTGAAAAATGCCCCAATCGTCTTCAGATT
CCACTGAAAAATATATTTGATGCCAAAACTTTCATGAAAGGGTAAGGTTT
TTGTATGTAATTGACCAAGGCCTAATTGAGAGCAGGCTTTCCTGGACATT
TCATTATATTATAATACAGTATTTCTAGATTCAAAGTTGAGCCAAAAGTA
GATGATATGTATCTGACTATTGTTAATCTCGTATTGTCATATGTGACTCC
CCAAGCGATTTTAAGTGCCTATGAAAAGACTGGTCCAGACTGATCAGCCG
AAATACAGTAAAAAACCCTTCCTTCTTTCTTTGTCTTCATTTTGTACTCA
ATCTATTCTGTCTTTAAAAATCTTTTTTTTTTAACAAAAAGACTCCCTGT
CCCCTGCTTGTATTTCCCTCGCAAAAAAGACACCCCCTGACTTAGTTTAG
CCTCTTCTATAATTGTTTCTCCTTCCTGACTAAGCACATACCCCTGTCTC
ACTTTGATCTCCATGAGCTGATCCAACTTTGATTTCCTTGTAGCGAAAAG
ACACCCCTGTCTCTCTTTGACCTTATTCTGATATTCTAGATATTCTGTGT
CCTTGGAAACTATAAGTTACCCCAACCTCAATTTGACCCGTCTGTTTGAC
CCTCTTCTGTTTTACAAACTCTGTTCTTTATTTCATATACCGTTTGTTTA
CGGCCTTCTATTATTATAACCGAAACAATATACAATAAAAATTAATTATC
TTACCTTTCTTCTTTATCTTTGATGAAAGTTGTAAGTCTTTTTTTCTCAT
CATAGTAAATTAATCTCACTTTGCAGCTAACAAACTGGTTTTCTAAAAGT
CCCACTAGAGTCCCACTTTATAACTGTTAAGTGAAGGGAAAAAGAGTGAA
AAAATATGAGCACTAGATTTGGTTTCTTGAGACATTACAACATATAAGTA
GTGGAAAACCTGAATTTCGGCTCTGGGATTTAAAGGGGTTATTCCATTGG
AAGAAAGTGGAAGAGTTAAATTTCTTTGGACTTATCTTTTCAGGCATATT
GCTATTGGATTCACTGAGGATGGAAGATATTTGTTGACTTATGTTTCTAA
CATTAAGTTTCAATTATCAGACACTTCTGTTTGCTCTTATCAATATGTCC
TGCATTGGTGGAAATTTGATCTTTGGAATAAACTACAAAAGGTAAGGACT
TCATTGATATTTATTCGTAGAATCATTTTTGGACCTACCTCGAAGGTCCT
TTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAAACTTT
CGCGAGGACGAAAAATCGCGAAATTCACGACATTTACTTTCGCGAATTTA
ACGGAAAAACATTTTTCGCAAGCATAAACTTTCGCGAATCAGGACGTAAA
ATTGAGAATTTTCACATGAAAAATGGCTTACAGGGTCAAATACTTCTTGG
ATTGGCTTGAAACATTATTTGTCCTTTGACTTTTTAGTCTTTTAGCAGGC
TAAAAAGTGCCATAAAAGTAAGTTACATTTTATTCAAAGTTTTACAGATT
TTCTATTTTGTCAAGAATTTTTCGCGAGGATAAACTTTCGCGAATGGCCC
TTATTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGGCCAGAATGCG
CAAAAATCGCGAAAGTTTCTGCTAGCGAAAGTTTGTACTTCCTTTTCTAT
TTCCATTCTTTATTTATCATTAGGTAGGTCCAATATGCATTACCAGATTG
TGCTTGTTTTTTTTTGAAGTATTCTCTTTTTCTTTTTGGACCTACCCCGG
TGGGGTAGAGGTCCTATAAATTAATCAATGTCCGTTCGTTCGTCCGTTCG
TTCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTCT
GATTTTTCATTTTAAACCTTCACTTTCGAATCAACTTTTCTTTCTATTTG
ATAATATTCTAATTCAACTCTTGAATATATTTTCAACATGCACAAAACCA
CTGTCTAATTCAATCAAAAGTTACACCTTTTCCCCCCCCNAACATGCACC
AAACCACTGTCTAATTCAATCAAAAGTTACACCTTCCCCCCCCCCTACAG
ATTATTCGGAGAGAGATTTTAAGACAAATTTTTGCAGTTTTTAAAGTCTT
TTGCTCCTGCTTTTTGTTTCAGGTATATGAAGTTGAATTATTTGCAAAGG
AAACAATTTCAAACGTCAGGATTCTGCGACTGATTATATTGTGGTTCATG
CATCTCTTGTCAAGTAACGACTCCTTTTCTCCGACAGACTTTGCAATTAA
AAACCATAGATCAACGATTATAGTTGTTATAAAGTTTCTGTATTACTCCA
GGCTATTTCTCTAACTAAACACTTAATTTTTTACATATCGTAAACGCCCC
GGGTGTTCATTAAATTTTTTGGATTTTTGGGGTGTTTAAAAGAAGGGGGC
GTTTATTTGATAAGTTATGAACAAGGTCACTTTAGTAACGTGTATTGGAA
CCTCATTTTTCCTTTCTATTATTATTTGAATATAAATATGTCAATTTAGG
GATGTAGAAATGGGTCAAAACCAGGTCGAATACAAAAAGAGTATAATTAT
TGTTGTATATCTAAGTTTTCTTCATATTATACTTCCTTACTGCTACCTGT
TTCAAATAAATGCCCCTCCTAGGGGGGGGGGCGTGGCGTTTATTTGAAGG
TGAGGGGGCGTTCATTGAAAATTTTTCCTTAAAGGAGGTGCGTTTATTCG
AGGGGGCGTTTATTCTAAGTGAAACGGTATATTATTATCCTTTTTCAGTA
CGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATCAATCGTCCCTAAA
TATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCATTTCAAATA
TGAACTGTTACCACCTCATCCACCATTTCTGACCACTATATCTTTGAAAA
GAAAGAATGTTATACTTTTAAATTCTGGAGATATGTTGTTTGCCATTCTG
ATACCTGAACCTTCAAGTTTATTTTCTTGCGAATCAGGAAAGGATATACA
GACAAGATTGTGTTACTGCCAGCAACGCCAACAAGACGTGCTTGCAAACC
AAAGCAACATAGATGTCAATTATGACGACTCGACTGATTATATTTCATTC
ATAAATCAAGGATTTAATACAATAAATGATAACGATTCGCAAACATCCCT
TCCTGACTCTCCTTTTGATTGTATGACAACTGTAATACCATGTGCAATTA
CTACAGTTGATGGTTTGATACAGTTGAAGAATAGTTATGAACACAGATGC
TTTCGACATGCTGATAAAGGTTAGGCTCATTGAGTTTAGATTCTATAGAT
GTATTTATGCTTTTATATTTTTGTTGTTTTCTACCCTGCACCATATATGG
CTAGGTACTAAAATGACTCTTTAGAAGGTCCAGTGTGATAGTGGTCAAGT
GGTAGCATGCTTGAATACTTGCTGTCGATCAGTCAGTGATGGTAAACATC
TGTCACAGGTCAGTAAATGTTATGTTAAGGTAACTACAATACAATATCTC
TCCAATAAAACAATGAACAATATCTCTCCAATAAAACAATGAACAGTATT
TATTCAATAACACAAGTAACGTTAACTATAAAACAATAAAACAATGTACA
ATTTCACTTGTATAATTCCAAGCTCCTCCACAACCATTATTTTGTTAGTT
ATTGGTAGTCTAAAGGTAAAAGTATCACTATGGATTCTTGAGATTAATGA
TTTTTTTTTTTACCTTTTTCAAATCGTATACCCTTCTTGGGAATGTCCTG
AAAACTTCAGGGTCATTGCATAAGTATTTG

Coding sequence (CDS) from alignment at sc0000395:8200..17779-

>TCONS_00021820 ID=TCONS_00021820|Name=TCONS_00021820|organism=Clytia hemisphaerica|type=CDS|length=2790bp|location=Sequence derived from alignment at sc0000395:8200..17779- (Clytia hemisphaerica)
TACGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATCAATCGTCCCTA
AATATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCCATTTCAAA
TATGAACTGTTACCACCTCATCCACCATTTCTGAGTATATGAAGTTGAAT
TATTTGCAAAGGAAACAATTTCAAACGTCAGGATTCTGCGACTGATTATA
TTGTGGTTCATGCATCTCTTGTCAAGCATATTGCTATTGGATTCACTGAG
GATGGAAGATATTTGTTGACTTATGTTTCTAACATTAAGTTTCAATTATC
AGACACTTCTGTTTGCTCTTATCAATATGTCCTGCATTGGTGGAAATTTG
ATCTTTGGAATAAACTACAAAAGATTAATGGTTCATTCAAATTGAAGAAG
AAATTTCATAAACACCGTCTTTTTGAAAAATGCCCCAATCGTCTTCAGAT
TCCACTGAAAAATATATTTGATGCCAAAACTTTCATGAAAGGATGAGTGA
GAATAATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAAGCTTTTTA
CTCGACAGTACGGATTCTCAAAGCAATGGAAGAATGTGTTATGTATCAAT
CGTCCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATATAGTGTCC
ATTTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGAGTATATGA
AGTTGAATTATTTGCAAAGGAAACAATTTCAAACGTCAGGATTCTGCGAC
TGATTATATTGTGGTTCATGCATCTCTTGTCAAGCATATTGCTATTGGAT
TCACTGAGGATGGAAGATATTTGTTGACTTATGTTTCTAACATTAAGTTT
CAATTATCAGACACTTCTGTTTGCTCTTATCAATATGTCCTGCATTGGTG
GAAATTTGATCTTTGGAATAAACTACAAAAGATTAATGGTTCATTCAAAT
TGAAGAAGAAATTTCATAAACACCGTCTTTTTGAAAAATGCCCCAATCGT
CTTCAGATTCCACTGAAAAATATATTTGATGCCAAAACTTTCATGAAAGG
ATGAGTGAGAATAATAATCGTAAATTAAGCCCCTATCCAATTCCAGCAAA
GCTTTTTACTCGACAGTACGGATTCTCAAAGCAATGGAAGAATGTGTTAT
GTATCAATCGTCCCTAAATATAACAAGAAGAAACCTGAACAGAATCAATA
TAGTGTCCATTTCAAATATGAACTGTTACCACCTCATCCACCATTTCTGA
GTATATGAAGTTGAATTATTTGCAAAGGAAACAATTTCAAACGTCAGGAT
TCTGCGACTGATTATATTGTGGTTCATGCATCTCTTGTCAAGCATATTGC
TATTGGATTCACTGAGGATGGAAGATATTTGTTGACTTATGTTTCTAACA
TTAAGTTTCAATTATCAGACACTTCTGTTTGCTCTTATCAATATGTCCTG
CATTGGTGGAAATTTGATCTTTGGAATAAACTACAAAAGATTAATGGTTC
ATTCAAATTGAAGAAGAAATTTCATAAACACCGTCTTTTTGAAAAATGCC
CCAATCGTCTTCAGATTCCACTGAAAAATATATTTGATGCCAAAACTTTC
ATGAAAGGATGAGTGAGAATAATAATCGTAAATTAAGCCCCTATCCAATT
CCAGCAAAGCTTTTTACTCGACAGTACGGATTCTCAAAGCAATGGAAGAA
TGTGTTATGTATCAATCGTCCCTAAATATAACAAGAAGAAACCTGAACAG
AATCAATATAGTGTCCATTTCAAATATGAACTGTTACCACCTCATCCACC
ATTTCTGAGTATATGAAGTTGAATTATTTGCAAAGGAAACAATTTCAAAC
GTCAGGATTCTGCGACTGATTATATTGTGGTTCATGCATCTCTTGTCAAG
CATATTGCTATTGGATTCACTGAGGATGGAAGATATTTGTTGACTTATGT
TTCTAACATTAAGTTTCAATTATCAGACACTTCTGTTTGCTCTTATCAAT
ATGTCCTGCATTGGTGGAAATTTGATCTTTGGAATAAACTACAAAAGATT
AATGGTTCATTCAAATTGAAGAAGAAATTTCATAAACACCGTCTTTTTGA
AAAATGCCCCAATCGTCTTCAGATTCCACTGAAAAATATATTTGATGCCA
AAACTTTCATGAAAGGATGAGTGAGAATAATAATCGTAAATTAAGCCCCT
ATCCAATTCCAGCAAAGCTTTTTACTCGACAGTACGGATTCTCAAAGCAA
TGGAAGAATGTGTTATGTATCAATCGTCCCTAAATATAACAAGAAGAAAC
CTGAACAGAATCAATATAGTGTCCATTTCAAATATGAACTGTTACCACCT
CATCCACCATTTCTGAGTATATGAAGTTGAATTATTTGCAAAGGAAACAA
TTTCAAACGTCAGGATTCTGCGACTGATTATATTGTGGTTCATGCATCTC
TTGTCAAGCATATTGCTATTGGATTCACTGAGGATGGAAGATATTTGTTG
ACTTATGTTTCTAACATTAAGTTTCAATTATCAGACACTTCTGTTTGCTC
TTATCAATATGTCCTGCATTGGTGGAAATTTGATCTTTGGAATAAACTAC
AAAAGATTAATGGTTCATTCAAATTGAAGAAGAAATTTCATAAACACCGT
CTTTTTGAAAAATGCCCCAATCGTCTTCAGATTCCACTGAAAAATATATT
TGATGCCAAAACTTTCATGAAAGGATGAGTGAGAATAATAATCGTAAATT
AAGCCCCTATCCAATTCCAGCAAAGCTTTTTACTCGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012245XLOC_012245Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021820-exon-sc0000395-1575043694:17527..17779TCONS_00021820-exon-sc0000395-1575043694:17527..17779Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1575043694:13489..13607TCONS_00021820-exon-sc0000395-1575043694:13489..13607Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1575043694:12389..12536TCONS_00021820-exon-sc0000395-1575043694:12389..12536Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1575043694:9767..9857TCONS_00021820-exon-sc0000395-1575043694:9767..9857Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1575043694:8200..9231TCONS_00021820-exon-sc0000395-1575043694:8200..9231Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1510915933:17527..17779TCONS_00021820-exon-sc0000395-1510915933:17527..17779Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1510915933:13489..13607TCONS_00021820-exon-sc0000395-1510915933:13489..13607Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1510915933:12389..12536TCONS_00021820-exon-sc0000395-1510915933:12389..12536Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1510915933:9767..9857TCONS_00021820-exon-sc0000395-1510915933:9767..9857Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1510915933:8200..9231TCONS_00021820-exon-sc0000395-1510915933:8200..9231Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1491911889:17527..17779TCONS_00021820-exon-sc0000395-1491911889:17527..17779Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1491911889:13489..13607TCONS_00021820-exon-sc0000395-1491911889:13489..13607Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1491911889:12389..12536TCONS_00021820-exon-sc0000395-1491911889:12389..12536Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1491911889:9767..9857TCONS_00021820-exon-sc0000395-1491911889:9767..9857Clytia hemisphaericaexon
TCONS_00021820-exon-sc0000395-1491911889:8200..9231TCONS_00021820-exon-sc0000395-1491911889:8200..9231Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021820-proteinTCONS_00021820-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000395supercontigsc0000395:8200..17779 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.8603	21.6175	7.65311	7.06043	5.79376	2.94215	2.25766	2.25742	1.51981	1.10216	1.91876	0.726133	0.563695	0.751859	1.47264	1.10923	2.87709	1.57934	0.444898	0.216838	1.75548	1.87776	8.25387	6.47832	1.93505	3.05309	0.455386	1.42589	3.67812	3.71254
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR032734DCAF15_WD40
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021820 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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