|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021802 ID=TCONS_00021802|Name=TCONS_00021802|organism=Clytia hemisphaerica|type=transcript|length=758bp
CTGTTGCCCATTTCATACTCATAGATGCGGGCCAATCAGAGCCAGTATGA
AGGTAAGTACCACATGTTTGATTATCGGTTTGATCCCAAGCCAACACTTG
TAActgaatatttttctcaaatgcCTCTCTCTGAGACCAGAACGAAGATT
CATTTTGAAGTAAGAATCGAATCGAGTCGGTAGGTGTTAGAAGAAGGACA
GTGTGATTTAGTTTTCTCAACGGTGGATTGTATTGGATGTCCATTGGTGT
CCAGGATCCTCCACCACATTTGTATTCCCATGAACCGTATGAAGTGTTTT
TAGCAGAGATAACAGCAATACCTAGTGTATCACCATCCTTATCAGCGAAG
ACTGATCTCTTTTTTCCACGGCTACTCTTTTCCAATAATTGAGATACTTG
AAATCCAGTGTTAGAGAATCCACTCATATTATATGGTAATGCTTTGACAT
CTAGTTTTGGATCCTTGATAATTGGACGATCATTAATATCTCTGATCTTA
ATAACCAGTTTATATTCTTGGTCACCATATATGATTCCATCCTTTCCTTG
TCCTTTATCATTTCCTTTACCTTTACCAACAATAAATGCTGGAGAAATGA
GAAGCTCCACAAAGCCAAAAACATCAGGTGCAGGCACGAAGCATAATGCA
AAGTTCGAGATCTCTGCCACTTTCCTGGTTTTTGCCCACGATTGTTCAAA
TGGCTTCTTTTTACCATTGGTCGTATAAAACCAACGTCCTGTGAAATAAA
gagtttga Run BLAST on NCBI transcript from alignment at sc0000395:140651..142325+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021802 ID=TCONS_00021802|Name=TCONS_00021802|organism=Clytia hemisphaerica|type=transcript|length=1675bp|location=Sequence derived from alignment at sc0000395:140651..142325+ (Clytia hemisphaerica)
CTGTTGCCCATTTCATACTCATAGATGCGGGCCAATCAGAGCCAGTATGA
AGGTAAGTACCACATGTTTGATTATCGGTTTGATCCCAAGCCAACACTTG
TAActgaatatttttctcaaatgcCTCTCTCTGAGACCAGAACGAAGATT
CATTTTGAAGTAAGAATCGAATCGAGTCGGTAGGTGTTAGAAGAAGGACA
GTGTGATTTAGTTTTCTCAACGGTGGATTGTATTGGATGTCCATTGGTGT
CCAGGATCCTCCACCACATTTGTATTCCCATGAACCGTATGAAGTGTTTT
TAGCAGAGATAACAGCAAtacctaaaaaagaaaaatataggTATTTATTA
TAGAGACAGAGGTTTTGAAGACTATTTTTACATATattcgaaagcatcca
ccgaaggaggacttcaaaatatctgttctgaaggcacgttccagctggat
atgggggtctgttcttaccgaactaaagaaaaaagtctgctggaaaaaag
tggtctgttctactgaagattgggaccagctggaaaaatatgatctgttc
ttatgaaaaaatagtctgatatcttatatttataaataacgTGTCTAAGA
ATctcctatctgttctgagggaatttaaaaaaagtcctgaatgtggttgc
ctggagtggcagctgaaaattctccatctgttctacaaaacatctggaaa
ttgNgaatatttttctcaaatgcCTCTCTCTGAGACCAGAACGAAGATTC
ATTTTGAAGTAAGAATCGAATCGAGTCGGTAGGTGTTAGAAGAAGGACAG
TGTGATTTAGTTTTCTCAACGGTGGATTGTATTGGATGTCCATTGGTGTC
CAGGATCCTCCACCACATTTGTATTCCCATGAACCGTATGAAGTGTTTTT
AGCAGAGATAACAGCAAtacctaaaaaagaaaaatataggTATTTATTAT
AGAGACATAGAGGTTTTGAAGACTATTTTTACATATATTTACCTCTAGTT
TAGTTTTATAGGAAGCAACTCAAAACCTGTACATTTGAGCgtctattttt
tgcttattcaaacttctattattcgaatctttttataattcgaatttaTT
CTTAGTCCCCTTTAAAGAAAAACCCTCTTAATATagtttctataattcga
atctttctgtaattcgaacaaataagattccccgttctagttcgaattag
cgagagtcaactgtacaaCAAAATGAATCATTACATACCTAGTGTATCAC
CATCCTTATCAGCGAAGACTGATCTCTTTTTTCCACGGCTACTCTTTTCC
AATAATTGAGATACTTGAAATCCAGTGTTAGAGAATCCACTCATATTATA
TGGTAATGCTTTGACATCTAGTTTTGGATCCTTGATAATTGGACGATCAT
TAATATCTCTGATCTTAATAACCAGTTTATATTCTTGGTCACCATATATG
ATTCCATCCTTTCCTTGTCCTTTATCATTTCCTTTACCTTTACCAACAAT
AAATGCTGGAGAAATGAGAAGCTCCACAAAGCCAAAAACATCAGGTGCAG
GCACGAAGCATAATGCAAAGTTCGAGATCTCTGCCACTTTCCTGGTTTTT
GCCCACGATTGTTCAAATGGCTTCTTTTTACCATTGGTCGTATAAAACCA
ACGTCCTGTGAAATAAAgagtttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021802-exon-sc0000395-1491911889:140651..140967 | TCONS_00021802-exon-sc0000395-1491911889:140651..140967 | Clytia hemisphaerica | exon |
| TCONS_00021802-exon-sc0000395-1510915933:140651..140967 | TCONS_00021802-exon-sc0000395-1510915933:140651..140967 | Clytia hemisphaerica | exon |
| TCONS_00021802-exon-sc0000395-1575043694:140651..140967 | TCONS_00021802-exon-sc0000395-1575043694:140651..140967 | Clytia hemisphaerica | exon |
| TCONS_00021802-exon-sc0000395-1491911889:141885..142325 | TCONS_00021802-exon-sc0000395-1491911889:141885..142325 | Clytia hemisphaerica | exon |
| TCONS_00021802-exon-sc0000395-1510915933:141885..142325 | TCONS_00021802-exon-sc0000395-1510915933:141885..142325 | Clytia hemisphaerica | exon |
| TCONS_00021802-exon-sc0000395-1575043694:141885..142325 | TCONS_00021802-exon-sc0000395-1575043694:141885..142325 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000395 | supercontig | sc0000395:140651..142325 + |
Blast
The following BLAST results are available for this feature:
|
