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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021736 ID=TCONS_00021736|Name=TCONS_00021736|organism=Clytia hemisphaerica|type=transcript|length=1392bp
GTCTAAAGTgatgcatagccctcttttgacgtcaatgcaatgtcttcttt
caaacctttccaagcaaagattttaacaaccaactttgtgccctctttct
gcctactctaacaattagaataggcagggcagaaagtcggccgtctaaac
tagagctaaataACACGAAGGTTAACTATAGTTTCTCTTTTTCTATGATA
TGGTCTCTAAGACTCCAAACATCTGCACTTCTATTTTCAGATGGCTCATC
ATAGTGAACAATACAAAGCGGTTTTCTTAGACGAATGGGACGACATATAT
CCTGAAGATTTGTTCGGCAATGTTGAGATTGCGTGGGTTGCTCGAAAAGT
TTTATACTACCGACATAGGGATGATCACTCTTCTGACTTTAAAGCAAAGG
GCTTTCAAACAATTCAACTTGGAACCAATTTACGCAACACGAAGGAGATC
GCTAAAAGAGCCAAAATCAATGCTGAAAATACTTTTTCGACCGTTGCAGT
AGCATTAATAAATCCACCTCAAGTGTTTCCGAAAGGCcctcctccaattt
ttgttgacTCAATTAATGAAGCGATCGCTTTAGAAcggaagaaaaataat
tatgacGGGATCCTAGTCGTAGCTGATTATATCTTATACCAATCACAACC
TTCACATAAAGTCGACCCACAAAGTAGCGGCCAAATCAAATATTGGTGGG
AATTCAGGGAAAAAGATAATCCGTTCACATTTTTGCAAGGGAAAGGCAAT
GTATTTGTAACTGTTCCAAGTTCATTGCATGGATTTGACTGGCCTACAGT
TATAATTGACAGAAAACACAGCTCAGATTGCAACATGATAATGAGATGCA
AAGCCAATTTGTACATCGTTGGGGAAGCTCAAGTCCAGGAGCCAGTAGAT
TTACCCTTTTCTGAATATATGAAGCTTGTCAATGTCAATGGCACTGAACC
TACAATGTTGCTTCCGTTAAAACAATTCGCTCGAACATGTCTcaaagaaa
ttgaaacatttaagGATACATCCAGAGAAGATACTAGATCGTTGTGTAGA
GAGATGCTACCTTTCTTGAAGAAAGCACTTCAAGCAATGGACAAGATCAA
AACAACTGAATCTGAGGAGAAAACTGAGAGCTTATGGAAAGTACTAGAGT
TCTTTACAAGAATGATTTTAATCAAGCGCTTCACACCTCCTCGTATGGTT
CAAGTTGCCTACAGCTTCCTGACATTGGGTAGCACACTTGGTGATTTATC
CAATAATCCAACAGTTCCAAATCGGGAGGCGCTTACCAAAATTGACTTCA
AGCCAATTGATCGATCGTTAGCCAACTGTCGTCTATACATTGAGGCTTTA
TGGGGAGCATTAGTAGAGGACACAGAAGAAAAACCAGAGTAT Run BLAST on NCBI protein sequence of TCONS_00021736-protein >TCONS_00021736-protein ID=TCONS_00021736-protein|Name=TCONS_00021736-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MAHHSEQYKAVFLDEWDDIYPEDLFGNVEIAWVARKVLYYRHRDDHSSDF
KAKGFQTIQLGTNLRNTKEIAKRAKINAENTFSTVAVALINPPQVFPKGP
PPIFVDSINEAIALERKKNNYDGILVVADYILYQSQPSHKVDPQSSGQIK
YWWEFREKDNPFTFLQGKGNVFVTVPSSLHGFDWPTVIIDRKHSSDCNMI
MRCKANLYIVGEAQVQEPVDLPFSEYMKLVNVNGTEPTMLLPLKQFARTC
LKEIETFKDTSREDTRSLCREMLPFLKKALQAMDKIKTTESEEKTESLWK
VLEFFTRMILIKRFTPPRMVQVAYSFLTLGSTLGDLSNNPTVPNREALTK
IDFKPIDRSLANCRLYIEALWGALVEDTEEKPEY Run BLAST on NCBI transcript from alignment at sc0000393:142682..144073 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021736 ID=TCONS_00021736|Name=TCONS_00021736|organism=Clytia hemisphaerica|type=transcript|length=1392bp|location=Sequence derived from alignment at sc0000393:142682..144073 (Clytia hemisphaerica)
ATACTCTGGTTTTTCTTCTGTGTCCTCTACTAATGCTCCCCATAAAGCCT
CAATGTATAGACGACAGTTGGCTAACGATCGATCAATTGGCTTGAAGTCA
ATTTTGGTAAGCGCCTCCCGATTTGGAACTGTTGGATTATTGGATAAATC
ACCAAGTGTGCTACCCAATGTCAGGAAGCTGTAGGCAACTTGAACCATAC
GAGGAGGTGTGAAGCGCTTGATTAAAATCATTCTTGTAAAGAACTCTAGT
ACTTTCCATAAGCTCTCAGTTTTCTCCTCAGATTCAGTTGTTTTGATCTT
GTCCATTGCTTGAAGTGCTTTCTTCAAGAAAGGTAGCATCTCTCTACACA
ACGATCTAGTATCTTCTCTGGATGTATCcttaaatgtttcaatttctttg
AGACATGTTCGAGCGAATTGTTTTAACGGAAGCAACATTGTAGGTTCAGT
GCCATTGACATTGACAAGCTTCATATATTCAGAAAAGGGTAAATCTACTG
GCTCCTGGACTTGAGCTTCCCCAACGATGTACAAATTGGCTTTGCATCTC
ATTATCATGTTGCAATCTGAGCTGTGTTTTCTGTCAATTATAACTGTAGG
CCAGTCAAATCCATGCAATGAACTTGGAACAGTTACAAATACATTGCCTT
TCCCTTGCAAAAATGTGAACGGATTATCTTTTTCCCTGAATTCCCACCAA
TATTTGATTTGGCCGCTACTTTGTGGGTCGACTTTATGTGAAGGTTGTGA
TTGGTATAAGATATAATCAGCTACGACTAGGATCCCgtcataattatttt
tcttccgTTCTAAAGCGATCGCTTCATTAATTGAgtcaacaaaaattgga
ggaggGCCTTTCGGAAACACTTGAGGTGGATTTATTAATGCTACTGCAAC
GGTCGAAAAAGTATTTTCAGCATTGATTTTGGCTCTTTTAGCGATCTCCT
TCGTGTTGCGTAAATTGGTTCCAAGTTGAATTGTTTGAAAGCCCTTTGCT
TTAAAGTCAGAAGAGTGATCATCCCTATGTCGGTAGTATAAAACTTTTCG
AGCAACCCACGCAATCTCAACATTGCCGAACAAATCTTCAGGATATATGT
CGTCCCATTCGTCTAAGAAAACCGCTTTGTATTGTTCACTATGATGAGCC
ATCTGAAAATAGAAGTGCAGATGTTTGGAGTCTTAGAGACCATATCATAG
AAAAAGAGAAACTATAGTTAACCTTCGTGTtatttagctctagtttagac
ggccgactttctgccctgcctattctaattgttagagtaggcagaaagag
ggcacaaagttggttgttaaaatctttgcttggaaaggtttgaaagaaga
cattgcattgacgtcaaaagagggctatgcatcACTTTAGAC Coding sequence (CDS) from alignment at sc0000393:142682..144073 >TCONS_00021736 ID=TCONS_00021736|Name=TCONS_00021736|organism=Clytia hemisphaerica|type=CDS|length=1152bp|location=Sequence derived from alignment at sc0000393:142682..144073 (Clytia hemisphaerica)
ATACTCTGGTTTTTCTTCTGTGTCCTCTACTAATGCTCCCCATAAAGCCT
CAATGTATAGACGACAGTTGGCTAACGATCGATCAATTGGCTTGAAGTCA
ATTTTGGTAAGCGCCTCCCGATTTGGAACTGTTGGATTATTGGATAAATC
ACCAAGTGTGCTACCCAATGTCAGGAAGCTGTAGGCAACTTGAACCATAC
GAGGAGGTGTGAAGCGCTTGATTAAAATCATTCTTGTAAAGAACTCTAGT
ACTTTCCATAAGCTCTCAGTTTTCTCCTCAGATTCAGTTGTTTTGATCTT
GTCCATTGCTTGAAGTGCTTTCTTCAAGAAAGGTAGCATCTCTCTACACA
ACGATCTAGTATCTTCTCTGGATGTATCcttaaatgtttcaatttctttg
AGACATGTTCGAGCGAATTGTTTTAACGGAAGCAACATTGTAGGTTCAGT
GCCATTGACATTGACAAGCTTCATATATTCAGAAAAGGGTAAATCTACTG
GCTCCTGGACTTGAGCTTCCCCAACGATGTACAAATTGGCTTTGCATCTC
ATTATCATGTTGCAATCTGAGCTGTGTTTTCTGTCAATTATAACTGTAGG
CCAGTCAAATCCATGCAATGAACTTGGAACAGTTACAAATACATTGCCTT
TCCCTTGCAAAAATGTGAACGGATTATCTTTTTCCCTGAATTCCCACCAA
TATTTGATTTGGCCGCTACTTTGTGGGTCGACTTTATGTGAAGGTTGTGA
TTGGTATAAGATATAATCAGCTACGACTAGGATCCCgtcataattatttt
tcttccgTTCTAAAGCGATCGCTTCATTAATTGAgtcaacaaaaattgga
ggaggGCCTTTCGGAAACACTTGAGGTGGATTTATTAATGCTACTGCAAC
GGTCGAAAAAGTATTTTCAGCATTGATTTTGGCTCTTTTAGCGATCTCCT
TCGTGTTGCGTAAATTGGTTCCAAGTTGAATTGTTTGAAAGCCCTTTGCT
TTAAAGTCAGAAGAGTGATCATCCCTATGTCGGTAGTATAAAACTTTTCG
AGCAACCCACGCAATCTCAACATTGCCGAACAAATCTTCAGGATATATGT
CGTCCCATTCGTCTAAGAAAACCGCTTTGTATTGTTCACTATGATGAGCC
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021736-exon-sc0000393-1491911889:142682..144073 | TCONS_00021736-exon-sc0000393-1491911889:142682..144073 | Clytia hemisphaerica | exon |
| TCONS_00021736-exon-sc0000393-1510915933:142682..144073 | TCONS_00021736-exon-sc0000393-1510915933:142682..144073 | Clytia hemisphaerica | exon |
| TCONS_00021736-exon-sc0000393-1575043694:142682..144073 | TCONS_00021736-exon-sc0000393-1575043694:142682..144073 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000393 | supercontig | sc0000393:142682..144073 . |
Blast
The following BLAST results are available for this feature:
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