TCONS_00021731 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021731
Unique NameTCONS_00021731
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1918

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021731 ID=TCONS_00021731|Name=TCONS_00021731|organism=Clytia hemisphaerica|type=transcript|length=1918bp
aaatattcgaatgttttcgatacgatgtaaacaaatatggcggaTTGGTA
AATCTCGAAACATCGCTATTTTTATccgttttgttgatttttcttgactt
tGGTGCCGACAAAATGGATCTCAACAATATGCCACCAAAACCACCGCCAT
ATGTCATGTGTTATTTATGTGGAAGAAAATATGGCACCAAATCGATTGTC
ATTCATGAGCCAAGCTGTATTAAAAAGTGgcatgctgaaaataagaaatt
accCAAACATTTGAGACGTAAAATGCCAACGAAACCTGATTACAGTAAAT
TAGCAAGTGGTGATTACGATGGCAATTATGTTGATCAAATGAATGATGCA
GCTTATAAAGCGGCACAAGAACAATTGATTCCTTGTGGGAATTGTGGTAG
AACTTTTTTACCGGAACGGTTACAAGTTCATCAGAAGTCTTGCACTGTTG
ACAATCCAATGAAAAGTAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCA
TCCAATCCTGAAATCAATAACAACAGGCCGACAACTAGTGATGGGAATAG
TGTTAATCCAACACAATCAAATACACCATCAAAGATAAttcataaaaaca
aactttgttGTTTGTGTATGAAAAAGATTCCAACATCTATTCTTCCAAAT
CATTTGGTAAAATGTAATGACTCTAAAATAGTAGAATTGAAAAACTCTGA
TGATTTATCAGAACCATCACCTTCGTCAAGTGTAGAACGTAAAAATActt
ttaacaaaggaaaaatcgCTCAGAAACCAAAAGCATCAAGCTCGACATCC
TCGCAGGAAAGTGTCAACCAATCAACATACGATCTAGATGATTCACAGTC
CGTAGAAAGGCCGTCAACCAGAACATTAAAACGAAGAACACCATCTAATA
ACACACAAGGGACTTACGATGTCGATTCTCCAGACGAGGATCCTGTTCCT
CCAAAACCAAAACCTAGCAAAACAAATAAACCAAAGAAATCTCCAATCAA
CCAAGCACCATCATCCAACAATGATTTTGCAGACCAGGTAGATCAACAAC
AAGGTGACGTTTCGTTAACACCGTGCCATCTTTGTAATCGAAAGTTTGCT
TCAGATCGTATCGATAAACATATGGTTATATGCCAGAAAACGAGTTCCAA
AAACCGTAAAGTATTTGATTCATCAAAACAACGTTCTGTTGGAAGTGATG
CTAACCCGCTCAAAAAGTCTAGTAGTTCTTCGTCAGCACCGAAGAAAGGT
GGTGGTAACTGGCGTCAAACGCATGAGGACTTTATTCGTTCAATTCGTGC
AGCTAAACAAGTTACCAAACACATGGCAAGTGGTGGTAAAGCATCAGATC
TACCTCCGCCACCACCATCCTTGAATCCTAATTACGTCCATTGCCAGTAC
TGTGATCGTAGATTCAACCCTGAAGTTGCTGAACGACATATTCCTAAATG
TGCTACTACACAGAATCGACCAAAACCACCAAAACAGAAAGCATTAGACG
TCTATAATAAAAAACCACAACCCAAAACAACATCTAAACCAGTCAGCTCA
GCTAGAAAGAAACCATCCAACCAAAAAGTAGGCTCCAACAATAACCTGTT
ACGACAATCATCAAGTGGGGGTTATAACAGTCCAACTATTGACCGAGGAT
ATCAAAATTACGACACGCCCTCTTCCAGTAAACAAAGTTTTAGCAGGAGC
AGTCCAAGGCAACAAGGAAATGATCCTTACAAGGCAAAAACTTTCAATGG
CATCAACAACAGGACTCCTGCTGCGAATAGAGGGTTTACATACAACGCAA
TGAATCATACGGGACCAAATTTCTTTGGTTAAGAAGTGTAACTCGAAGAT
TTCCTCAACAAAACTCTTAatatttttccctaaaaatgggctcttccaga
aaattgttttaaattggG
Run BLAST on NCBI

protein sequence of TCONS_00021731-protein

>TCONS_00021731-protein ID=TCONS_00021731-protein|Name=TCONS_00021731-protein|organism=Clytia hemisphaerica|type=polypeptide|length=609bp
IFECFRYDVNKYGGLVNLETSLFLSVLLIFLDFGADKMDLNNMPPKPPPY
VMCYLCGRKYGTKSIVIHEPSCIKKWHAENKKLPKHLRRKMPTKPDYSKL
ASGDYDGNYVDQMNDAAYKAAQEQLIPCGNCGRTFLPERLQVHQKSCTVD
NPMKSRTGGKPASSSSSNPEINNNRPTTSDGNSVNPTQSNTPSKIIHKNK
LCCLCMKKIPTSILPNHLVKCNDSKIVELKNSDDLSEPSPSSSVERKNTF
NKGKIAQKPKASSSTSSQESVNQSTYDLDDSQSVERPSTRTLKRRTPSNN
TQGTYDVDSPDEDPVPPKPKPSKTNKPKKSPINQAPSSNNDFADQVDQQQ
GDVSLTPCHLCNRKFASDRIDKHMVICQKTSSKNRKVFDSSKQRSVGSDA
NPLKKSSSSSSAPKKGGGNWRQTHEDFIRSIRAAKQVTKHMASGGKASDL
PPPPPSLNPNYVHCQYCDRRFNPEVAERHIPKCATTQNRPKPPKQKALDV
YNKKPQPKTTSKPVSSARKKPSNQKVGSNNNLLRQSSSGGYNSPTIDRGY
QNYDTPSSSKQSFSRSSPRQQGNDPYKAKTFNGINNRTPAANRGFTYNAM
NHTGPNFFG
Run BLAST on NCBI

transcript from alignment at sc0000393:230794..234930-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021731 ID=TCONS_00021731|Name=TCONS_00021731|organism=Clytia hemisphaerica|type=transcript|length=4137bp|location=Sequence derived from alignment at sc0000393:230794..234930- (Clytia hemisphaerica)
AAATATTCGAATGTTTTCGATACGATGTAAACAAATATGGCGGATTGGTA AATCTCGAAACATCGCTATTTTTATCCGTTTTGTTGATTTTTCTTGACTT TGGTGCCGACAAAATGGTAAGAATTCATTAATTTTAATAAGCTTTTCATG ACTTCCATAGTGATCATCAATGATTTACCCGTTAAATATGAAAATAAAGT GAATACTAGGTTGGGAGAATATTTTCCGTTTTAACCATCTTTTGAATGAT TGAGGTCACATTTTTTATACAGGGCAGACGTAACAGAAACTTCTTCAGTA CCTAGTTAGTAGGTGTTTTTTCTTGTATTTTTCTTTATATATATTCAATG ATTGAGACATGTATCACGGTACGATGTAATGATTTTGAGAGCTTGAAAAT AAAATTCTGAGCGTGACCCAAATTCCCGACGGCACAAGACAAGCTGACCC ATGCACGTTCGGGGCGTTTGGAAAACGATCTGAAACGATATCATAATAAT ATAATAATAATAATAATAATAATAACATATATTTTAAGTGGCATGCTCCA AAAAATTCTAAAGCTTTTAGTGTTTAGGCAGCTGAAGAATTGTTTCCACA AAGGGCCACTATGAACAGAACAAGAACTGGGAAAATCGAACAAGACAGAA AGACTTAAATTTAATTATCTAACAAAAAAAGTACTCCAGGATGCAAGTGA AATTTTTCTATCTGTGGACCTAGACGGGGTTCAGTTATAATCAGTTAGTA GGGTTAGGGTTGGAGCTTAAGAGTCACACTAGGGTATTCGTGCCCCCCTA GGCTAGACTTAACTTAGGATCCCAGGGATCCTTGTAGGGTTGGGAGCTTT GTTAATTAAGGTCCTGTAAATTACACGCTATAGGTATTTGTGAATGACAG CATTCTGCAGTGTCTTGTTGGCGCAATCAGGTAGGCATTGGATTTGTAAA CCAAGATTGCTTGCATTTGGGGGTTCGAGCTGAGGTGGGAGACTATCTAT TTCACCAGTATGGGCCTGTATGGGCAAGTTTCAGAAAAATACTTAGAAAG CAGTTAGAAACACTTGAAAAAGTTAGAAAATCAGAATAGAAAATAGGATC AAAGTCGAAATTAGGAGGGAAATAAGAGAGGATGCATCCTGGAGTATGAT ATCGTTTTCCGATCGTTTGGGGCATGTTCAAGCCAGGTTTTAGAGGGAAA ATCTAAGACTTTTTTGCTCAAACTTGGTTCAAGCATTGATTTTTTGACAA AAAAATGTTTTGCTATTTCAGCTAGCCTGTAACATGACCCAAAAATGTTC AGGTATATCTATTCAAGCCATACTAATTGTGGGTTGTCACCTGAAATCTT AAGCTACTGCCTTCTTTAAAAAATGGATATACTGTAGAAGATGGTTTGAA ATATTTTACAATGAATTTCCACCATGTAACTGAACAAAGCATAGCAAAAC CTCAATCAAAATATCTATTTCTCCAGATCTCTTTTCTATCTCTGTTTATA TCTCTATCTATTTTATTTTGACTTTTAGTAAGAAAATAAAGAATTTCAAA AACTTAAGAACCGTGTCAAGAACCCCTTTTTAGTAATTTCAAATTGTGAT TTCTCAACTTTTGGAAAAAAGTTAGAAAAAAATCAAAGGTTTTACCCCCC CCACCCCGCAGAAGGTTTTTGCAAGCTAAATATATCAAACCATCTGATTA TCCCTTCGAGTCTGCATTGCAATGGCTACGGTCTAATAATAACAATAAAA TAATAAATTATCTAGCCTTAATTTCAGCTTATAGAAGAGCTTGTCAGAGT CAAAAATACTTCTGACACATTTATCTTTGTGTCAAAAATTTAATTAGAAT AAAAATCAGATAGGGGGCTTTAAAGTACCTCCATACAAAAAAAGGAAGTT TGTAGCATCAAAATGATAAAGTAAACAATAGCTTCCACTATTCTTTCACT TTTCATCTCCATTTTATTTGAAATTATTTTTCACAAAAATTAGAGTACCA GTATTCTGAATTAACTTGTTAAGAAATGACAAGCAAAATAAAGATTAGCG CACACTTTACTTTAAAGTGAATGCACTTAAGCATAAAACACTTACCCAGC AAGCCAGTATAAAAGGGAATAAATTGATTTTGTTTAAAATGATGCAATCC ACTTAAACTTTTTTTCCAAAATATGTGTTACAGTGATCATCATCAACCCT TATTAACCCAAAGTTTGGTTTCAACTTATTAAAGTTCACTTGTTCACTTC ACACGGGTCGACCCTTGCTACGTTAGGGGAAATGGGTAGACAGTCCAGGG CTGTGTTAACGGCATTATTATCTTTACTTTTTTAGGATCTCAACAATATG CCACCAAAACCACCGCCATATGTCATGTGTTATTTATGTGGAAGAAAATA TGGCACCAAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGTGGC ATGCTGAAAATAAGAAATTACCCAAACATTTGAGACGTAAAATGCCAACG AAACCTGATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTATGT TGATCAAATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGATTC CTTGTGGGAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTTCAT CAGAAGTCTTGCACTGTTGACAATCCAATGAAAAGTAGGACAGGAGGAAA ACCAGCTTCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGCCGA CAACTAGTGATGGGAATAGTGTTAATCCAACACAATCAAATACACCATCA AAGATAATTCATAAAAACAAACTTTGTTGTTTGTGTATGAAAAAGATTCC AACATCTATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAATAG TAGAATTGAAAAACTCTGATGATTTATCAGAACCATCACCTTCGTCAAGT GTAGAACGTAAAAATACTTTTAACAAAGGAAAAATCGCTCAGAAACCAAA AGCATCAAGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACATACG ATCTAGATGATTCACAGTCCGTAGAAAGGCCGTCAACCAGAACATTAAAA CGAAGAACACCATCTAATAACACACAAGGGACTTACGATGTCGATTCTCC AGACGAGGATCCTGTTCCTCCAAAACCAAAACCTAGCAAAACAAATAAAC CAAAGAAATCTCCAATCAACCAAGCACCATCATCCAACAATGATTTTGCA GACCAGGTAGATCAACAACAAGGTGACGTTTCGTTAACACCGTGCCATCT TTGTAATCGAAAGTTTGCTTCAGATCGTATCGATAAACATATGGTTATAT GCCAGAAAACGAGTTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAA CGTTCTGTTGGAAGTGATGCTAACCCGCTCAAAAAGTCTAGTAGTTCTTC GTCAGCACCGAAGAAAGGTGGTGGTAACTGGCGTCAAACGCATGAGGACT TTATTCGTTCAATTCGTGCAGCTAAACAAGTTACCAAACACATGGCAAGT GGTGGTAAAGCATCAGATCTACCTCCGCCACCACCATCCTTGAATCCTAA TTACGTCCATTGCCAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTG AACGACATATTCCTAAATGTGCTACTACACAGAATCGACCAAAACCACCA AAACAGAAAGCATTAGACGTCTATAATAAAAAACCACAACCCAAAACAAC ATCTAAACCAGTCAGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAG GCTCCAACAATAACCTGTTACGACAATCATCAAGTGGGGGTTATAACAGT CCAACTATTGACCGAGGATATCAAAATTACGACACGCCCTCTTCCAGTAA ACAAAGTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACA AGGCAAAAACTTTCAATGGCATCAACAACAGGACTCCTGCTGCGAATAGA GGGTTTACATACAACGCAATGAATCATACGGGACCAAATTTCTTTGGTTA AGAAGTGTAACTCGAAGATTTCCTCAACAAAACTCTTAATATTTTTCCCT AAAAATGGGCTCTTCCAGAAAATTGTTTTAAATTGGG

Coding sequence (CDS) from alignment at sc0000393:230794..234930-

>TCONS_00021731 ID=TCONS_00021731|Name=TCONS_00021731|organism=Clytia hemisphaerica|type=CDS|length=3660bp|location=Sequence derived from alignment at sc0000393:230794..234930- (Clytia hemisphaerica)
GATCTCAACAATATGCCACCAAAACCACCGCCATATGTCATGTGTTATTT
ATGTGGAAGAAAATATGGCACCAAATCGATTGTCATTCATGAGCCAAGCT
GTATTAAAAAGTGGCATGCTGAAAATAAGAAATTACCCAAACATTTGAGA
CGTAAAATGCCAACGAAACCTGATTACAGTAAATTAGCAAGTGGTGATTA
CGATGGCAATTATGTTGATCAAATGAATGATGCAGCTTATAAAGCGGCAC
AAGAACAATTGATTCCTTGTGGGAATTGTGGTAGAACTTTTTTACCGGAA
CGGTTACAAGTTCATCAGAAGTCTTGCACTGTTGACAATCCAATGAAAAG
TAGGACAGGAGGAAAACCAGCTTCAAGTAGTTCATCCAATCCTGAAATCA
ATAACAACAGGCCGACAACTAGTGATGGGAATAGTGTTAATCCAACACAA
TCAAATACACCATCAAAGATAATTCATAAAAACAAACTTTGTTGTTTGTG
TATGAAAAAGATTCCAACATCTATTCTTCCAAATCATTTGGTAAAATGTA
ATGACTCTAAAATAGTAGAATTGAAAAACTCTGATGATTTATCAGAACCA
TCACCTTCGTCAAGTGTAGAACGTAAAAATACTTTTAACAAAGGAAAAAT
CGCTCAGAAACCAAAAGCATCAAGCTCGACATCCTCGCAGGAAAGTGTCA
ACCAATCAACATACGATCTAGATGATTCACAGTCCGTAGAAAGGCCGTCA
ACCAGAACATTAAAACGAAGAACACCATCTAATAACACACAAGGGACTTA
CGATGTCGATTCTCCAGACGAGGATCCTGTTCCTCCAAAACCAAAACCTA
GCAAAACAAATAAACCAAAGAAATCTCCAATCAACCAAGCACCATCATCC
AACAATGATTTTGCAGACCAGGTAGATCAACAACAAGGTGACGTTTCGTT
AACACCGTGCCATCTTTGTAATCGAAAGTTTGCTTCAGATCGTATCGATA
AACATATGGTTATATGCCAGAAAACGAGTTCCAAAAACCGTAAAGTATTT
GATTCATCAAAACAACGTTCTGTTGGAAGTGATGCTAACCCGCTCAAAAA
GTCTAGTAGTTCTTCGTCAGCACCGAAGAAAGGTGGTGGTAACTGGCGTC
AAACGCATGAGGACTTTATTCGTTCAATTCGTGCAGCTAAACAAGTTACC
AAACACATGGCAAGTGGTGGTAAAGCATCAGATCTACCTCCGCCACCACC
ATCCTTGAATCCTAATTACGTCCATTGCCAGTACTGTGATCGTAGATTCA
ACCCTGAAGTTGCTGAACGACATATTCCTAAATGTGCTACTACACAGAAT
CGACCAAAACCACCAAAACAGAAAGCATTAGACGTCTATAATAAAAAACC
ACAACCCAAAACAACATCTAAACCAGTCAGCTCAGCTAGAAAGAAACCAT
CCAACCAAAAAGTAGGCTCCAACAATAACCTGTTACGACAATCATCAAGT
GGGGGTTATAACAGTCCAACTATTGACCGAGGATATCAAAATTACGACAC
GCCCTCTTCCAGTAAACAAAGTTTTAGCAGGAGCAGTCCAAGGCAACAAG
GAAATGATCCTTACAAGGCAAAAACTTTCAATGGCATCAACAACAGGACT
CCTGCTGCGAATAGAGGGTTTACATACAACGCAATGAATCATACGGGACC
AAATTTCTTTGGTTAAATATTCGAATGTTTTCGATACGATGTAAACAAAT
ATGGCGGATTGGTAAATCTCGAAACATCGCTATTTTTATCCGTTTTGTTG
ATTTTTCTTGACTTTGGTGCCGACAAAATGGATCTCAACAATATGCCACC
AAAACCACCGCCATATGTCATGTGTTATTTATGTGGAAGAAAATATGGCA
CCAAATCGATTGTCATTCATGAGCCAAGCTGTATTAAAAAGTGGCATGCT
GAAAATAAGAAATTACCCAAACATTTGAGACGTAAAATGCCAACGAAACC
TGATTACAGTAAATTAGCAAGTGGTGATTACGATGGCAATTATGTTGATC
AAATGAATGATGCAGCTTATAAAGCGGCACAAGAACAATTGATTCCTTGT
GGGAATTGTGGTAGAACTTTTTTACCGGAACGGTTACAAGTTCATCAGAA
GTCTTGCACTGTTGACAATCCAATGAAAAGTAGGACAGGAGGAAAACCAG
CTTCAAGTAGTTCATCCAATCCTGAAATCAATAACAACAGGCCGACAACT
AGTGATGGGAATAGTGTTAATCCAACACAATCAAATACACCATCAAAGAT
AATTCATAAAAACAAACTTTGTTGTTTGTGTATGAAAAAGATTCCAACAT
CTATTCTTCCAAATCATTTGGTAAAATGTAATGACTCTAAAATAGTAGAA
TTGAAAAACTCTGATGATTTATCAGAACCATCACCTTCGTCAAGTGTAGA
ACGTAAAAATACTTTTAACAAAGGAAAAATCGCTCAGAAACCAAAAGCAT
CAAGCTCGACATCCTCGCAGGAAAGTGTCAACCAATCAACATACGATCTA
GATGATTCACAGTCCGTAGAAAGGCCGTCAACCAGAACATTAAAACGAAG
AACACCATCTAATAACACACAAGGGACTTACGATGTCGATTCTCCAGACG
AGGATCCTGTTCCTCCAAAACCAAAACCTAGCAAAACAAATAAACCAAAG
AAATCTCCAATCAACCAAGCACCATCATCCAACAATGATTTTGCAGACCA
GGTAGATCAACAACAAGGTGACGTTTCGTTAACACCGTGCCATCTTTGTA
ATCGAAAGTTTGCTTCAGATCGTATCGATAAACATATGGTTATATGCCAG
AAAACGAGTTCCAAAAACCGTAAAGTATTTGATTCATCAAAACAACGTTC
TGTTGGAAGTGATGCTAACCCGCTCAAAAAGTCTAGTAGTTCTTCGTCAG
CACCGAAGAAAGGTGGTGGTAACTGGCGTCAAACGCATGAGGACTTTATT
CGTTCAATTCGTGCAGCTAAACAAGTTACCAAACACATGGCAAGTGGTGG
TAAAGCATCAGATCTACCTCCGCCACCACCATCCTTGAATCCTAATTACG
TCCATTGCCAGTACTGTGATCGTAGATTCAACCCTGAAGTTGCTGAACGA
CATATTCCTAAATGTGCTACTACACAGAATCGACCAAAACCACCAAAACA
GAAAGCATTAGACGTCTATAATAAAAAACCACAACCCAAAACAACATCTA
AACCAGTCAGCTCAGCTAGAAAGAAACCATCCAACCAAAAAGTAGGCTCC
AACAATAACCTGTTACGACAATCATCAAGTGGGGGTTATAACAGTCCAAC
TATTGACCGAGGATATCAAAATTACGACACGCCCTCTTCCAGTAAACAAA
GTTTTAGCAGGAGCAGTCCAAGGCAACAAGGAAATGATCCTTACAAGGCA
AAAACTTTCAATGGCATCAACAACAGGACTCCTGCTGCGAATAGAGGGTT
TACATACAACGCAATGAATCATACGGGACCAAATTTCTTTGGTTAAATAT
TCGAATGTTTTCGATACGATGTAAACAAATATGGCGGATTGGTAAATCTC
GAAACATCGCTATTTTTATCCGTTTTGTTGATTTTTCTTGACTTTGGTGC
CGACAAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012192XLOC_012192Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021731-proteinTCONS_00021731-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021731-exon-sc0000393-1575043694:234815..234930TCONS_00021731-exon-sc0000393-1575043694:234815..234930Clytia hemisphaericaexon
TCONS_00021731-exon-sc0000393-1575043694:230794..232595TCONS_00021731-exon-sc0000393-1575043694:230794..232595Clytia hemisphaericaexon
TCONS_00021731-exon-sc0000393-1510915933:234815..234930TCONS_00021731-exon-sc0000393-1510915933:234815..234930Clytia hemisphaericaexon
TCONS_00021731-exon-sc0000393-1510915933:230794..232595TCONS_00021731-exon-sc0000393-1510915933:230794..232595Clytia hemisphaericaexon
TCONS_00021731-exon-sc0000393-1491911889:234815..234930TCONS_00021731-exon-sc0000393-1491911889:234815..234930Clytia hemisphaericaexon
TCONS_00021731-exon-sc0000393-1491911889:230794..232595TCONS_00021731-exon-sc0000393-1491911889:230794..232595Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:230794..234930 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.33108 1.52072 2.60771 2.71344 20.3805 15.8837 15.9336 14.6419 6.57064 11.3953 10.0533 11.4212 1.03715 3.7697 2.65654 2.85088 2.9267 3.29976 3.72992 4.33677 4.14637 2.7579 1.34104 3.25369 12.7481 12.4921 3.74202 5.11162 2.1636 1.52129
Blast
BLAST of TCONS_00021731 vs. Swiss-Prot (Human)
Match: ZN474 (Zinc finger protein 474 OS=Homo sapiens GN=ZNF474 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.995e-31
Identity = 74/194 (38.14%), Postives = 104/194 (53.61%), Query Frame = 3
Query:  129 MPPKPPPYVMCYLCGRKYGTKSIVIHEPSCIKKWHAENKKLPKHLRRKMPTKPDYSKLASGDYDGNYVDQMNDAAYKAAQEQLIPCGNCGRTFLPERLQVHQKSCTVDNPMKSRTGGKPAXXXXXNPEINNNRPTTSDGNSVNPTQSNTPSKIIHKNKLCCLCMKKIPTSILPNHLVKC-------NDSKIVEL 689
            +P + P + +CY+CGR++G++SI IHEP C++KWH EN KLPKHLRR  P+KP     +            N+AA+++AQ QL+PC +CGRTFLP+ L VH +SC            KP       P  N++   T    +     S TP++   +  +C +C K+  T  LP H  KC       ND   VEL
Sbjct:   87 IPARRPGFRVCYICGREFGSQSIAIHEPQCLQKWHIENSKLPKHLRRPEPSKPQSLSSSGSYSL----QATNEAAFQSAQAQLLPCESCGRTFLPDHLLVHHRSC------------KPKGEGPRAPHSNSSDHLTGLKKAC----SGTPARP--RTVICYICGKEFGTLSLPIHEPKCLEKWKMENDRLPVEL 258          
The following BLAST results are available for this feature:
BLAST of TCONS_00021731 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN4741.995e-3138.14Zinc finger protein 474 OS=Homo sapiens GN=ZNF474 ... [more]
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