TCONS_00021714 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021714
Unique NameTCONS_00021714
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1851

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021714 ID=TCONS_00021714|Name=TCONS_00021714|organism=Clytia hemisphaerica|type=transcript|length=1851bp
aaaaaaacaataaagatTTACCTGAGCTACTGGTGATACCGATAATTTCA
AGATGAGTGGAAAAGATGTGATGGTTGGATGCGTGAATGTCATGTGCGGT
TTTCACAAAGGGAAATGTCACAAACTAGAAGATTTACTAAGTCATTCATT
CCGTTGTGGGAACTTGGAGCTGTGTGCCAAGATGGATGAGAGTAAATACA
ACAGTGCAATATCGAAGTGTGGAGACGCTGAAAGATCTCTTGATACAACT
CGGTTAAAAGTCGAAGAcgctgaaaaagaaatttctcaATTTGAAAAAGA
GTCAAAAGAACTTAATGCAAAGATTGAAATAACTCGAAGgTTCAACAACG
AGGTCATCGAATTGGAGGATCGAAACTTAACACCGAATGCCTTGCCAAGG
GAAATGAatgttgaagaaaaagaaggcaCCCGAAACAATGACCGAATCAG
GACGGATCTTCTCAATTTGATCAGGGCAAAAAGCATTCCCGAATTTTACA
CCACGTTATCGAAAACCAGTCATCTTCTAACCATATCTCAAATCAAAGAG
CTACAAACTTGTGCAGTCCAAGAAAACAATCCGGCTATTCTGACTTATCT
TCTAACCAAACATAACTTGGAGATCATAGAGGCTGATTACATAAGACTTT
TTACAAAGGCATTGAGAATGTACAAAAACAAGCCAACTGAAATATCACCA
TGCATACCAGTGTTACTGAAATTTCATCCTAAATTACTGGTAACTAGGCT
TCCAGAAATGAAGAATGGAACAGCATTTCATTGTGCTCTCTCAgatggaa
atttcactttaTTCAATTATTTATTGAATTATAAGGAAGAAactgatttg
aaaaatttcgatgTATCAACATTTGAGAATCTACACGGCGATGAGAAAAA
GATGGTGAAAAAGTTGGTGAAGGATAAAAGGAAACTACAAGGCGATGGTG
GAGGATTTCTTGAAAAGCTTGGATTataagtttttagttttttgagaata
ttttgtCAACACAACAGTtgactttctttgaaaatattttaaatatttac
gGATACGCGTATGTAATCATATTAATAAAAACATTAATCAAATTCGAGTA
TAAACTATTTACAGTCATTATGCATTTAGTatattttatttacaaaaaaa
attacatttgaacatcaaaatatattcaaaatatcagtaattaaaatcaa
ttttcttcattCAATATAATGTAAGCAAATATGTAAGCAAATATGTCTTT
TGGGCCACAATTTTATAGTGTTATGTCTTATTCTACGTTCGGCCAACGTG
GGATGATATTTTCACATTTGAAGGAATGATTACGATCTATGGCTTTCACC
ATACATGGTAGAAAAGCCACCTCGTAGAGAGCAAACTCGGATTTACATCA
AGTATTTAATGCACGAGAAGTATTATTGTAATATTTTATAAAAGGTTCAT
TCCAATATgcatttgaaaatcttttacaacACAGTTTACGTAATTATACG
ATGAATTCAAAAGTTCAATAGAATAAGGTATCAAAAAGCAGTGTTCAAGT
TTAAAATCTTTAATAGAAAAAACTGTTAATAAAATTCACGAAATCCCTAA
AATCAGGATGTAGACATGAAATTATAATCACAGCCAGATCTAAACATTTT
ATTTACAACAGGGCATTGATTGGTGCCTACAGCTACTTTTTCaagtattg
ggcttttccagaaaaaaaattgaatatgggggtggaggatatgttttttg
gaaatttaccccggaAAACAGAGcttacccctggacattcaaaactaccc
ctaaacagagcaaattttccccaaaaacaaggcaaatttcgcagattttt
c
Run BLAST on NCBI

protein sequence of TCONS_00021714-protein

>TCONS_00021714-protein ID=TCONS_00021714-protein|Name=TCONS_00021714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
MSGKDVMVGCVNVMCGFHKGKCHKLEDLLSHSFRCGNLELCAKMDESKYN
SAISKCGDAERSLDTTRLKVEDAEKEISQFEKESKELNAKIEITRRFNNE
VIELEDRNLTPNALPREMNVEEKEGTRNNDRIRTDLLNLIRAKSIPEFYT
TLSKTSHLLTISQIKELQTCAVQENNPAILTYLLTKHNLEIIEADYIRLF
TKALRMYKNKPTEISPCIPVLLKFHPKLLVTRLPEMKNGTAFHCALSDGN
FTLFNYLLNYKEETDLKNFDVSTFENLHGDEKKMVKKLVKDKRKLQGDGG
GFLEKLGL
Run BLAST on NCBI

transcript from alignment at sc0000393:224681..229796+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021714 ID=TCONS_00021714|Name=TCONS_00021714|organism=Clytia hemisphaerica|type=transcript|length=5116bp|location=Sequence derived from alignment at sc0000393:224681..229796+ (Clytia hemisphaerica)
aaaaaaacaataaagatTTACCTGAGCTACTGGTGATACCGATAATTTCA AGATGAGTGGAAAAGATGTGATGGTTGGATGCGTGAATGTCATGTGCGGT TTTCACAAAGGGAAATGTGTAAGTACTTTGCtgattttgcatattttttt aagcacacattttcttataaacaacTGCAATTTTCGGGTCAGCCTTTGGG GGTTGTTTAGCATTCTAGCTAAGGGGTTAGTTTGTTACAGGGCGCTATGG GTGTTTGTTACAGGGCGCTGTGGGTGTTTGTTACATGGCGCTTTTGAGAA GGCGTTGCGGAAAACAAGTCACGTACAGatagaaaatctagaaaatgatt gaattGAAATGTTGGGGCGCTCCTCGTTAAGTTTTTGAAACCCAAAAAAA ACAGAACTAAGAAAAAGAACTATTGTACTTAGTATGTAACTAATTTTAAA AATCGAACCTTTACAAAAGGAATGTATCCTTAATAACTCGAATAAGTTTT ATGATCCCTTCCGTTtgcaatgccttataaaccttactccataactcgaa tttccttaactcgaacaaatttgtgttcccctacgtgttcgagttataaa gaTTCCACGGTTGTAACAGTTTTGACATTCTTCCATCTAGCACAAACTAG AAGATTTACTAAGTCATTCATTCCGTTGTGGGAACTTGGAGCTGTGTGCC AAGATGGATGAGAGTAAATACAACAGTGCAATATCGAAGTGTGGAGACGC TGAAAGATCTCTTGATACAACTCGGTTAAAAGTCGAAGAcgctgaaaaag aaatttctcaATTTGAAAAAGAGTCAAAAGAACTTAATGCAAAGATTGAA ATAACTCGAAGGTAAAGAAGATTTTCAGTTTGATTTCGtgtatttttcta aagaatcaTAGTTAACCTTGCTGTTATTTGGGATACTCGGCTAAGATGTT GTACTATTTCTGGATGACAGGCCCCTCatagatttttcactaaaacTCAT CCCCAGAAAGATATGATTAGGTACTAGAATGAAAATAGATCAGGGCTTAA AGTCGTTATCATTAATCGAAATAATAGATGAATGTATTTTTAGTTTCTTC TGGATAAACTCAATTTACCTAGACTGTAGTGGCCTGAAGATATAACTCAA CCAATAAAATATCGAGAATGTACAACTAAAAGATGTTTTGGACTGAGGAC TCGAATACAACACAACcaatgaaatattatttttaaggTTCAACAACGAG GTCATCGAATTGGAGGATCGAAACTTAACACCGAATGCCTTGCCAAGGTA ATTAATTAATCAAGTTCCACTCTACCACAAAGAGTTTCTCATTTGTGAAA GCTCGGacatttttggatgatttcGAAAATAGTAGAGTTTAAGAAAGATT GCGGCTTGACTTATAAGGAGCCGTATTgtatatgttttttataagcatac aaaaatttgaaaacagtttGGAGATGCTTAGGGCGAGGGCTTcataaggc tgaaaaaatgcttATAAGGATGCTTATATTGGAAGAAAAATTTTAGGGGA TTCCAGAAAATCcgttttcgtaggctcaaggtaatgcttgataaaatatt tgccatatctgagcctagatatgcttatgattgcaatgcttataataaaa acatgcAAAAGACTATTGGGTATCATATTCTATTTATTCATAATTTGACT CTTTCATAGGGAAATGAatgttgaagaaaaagaaggcaCCCGAAACAATG GTAAGTTGGTAATTAATAAGTTTATTAGTTTATGTTTACATTAACTAAGG TTTTAACTGCAGAGTCTTTAACCCGAATTTCTATAGCTTAATACCCTTAA TACATATCATCTcccaaaaaggccaaaaatacAGTTCACGAggcttttct ttataagaataattttaaaagaacacgcAAGActtaattttgggaaaaac ttaagaacaaattaagaacaattcctcagatttcagaaatgacTAAGATT CCAATTTTAAGCCCCTTTTTAAGTCAATGAGTAAATAAAGTAAGTATGCT TGACTTTAATCAGATAACTTCTTCAGAGATTTAATTTCGCGTTTTCGCAA ATATAGGCCTTGTGAaaataaaactcgcgaaatcaCGTGAGATTGCTAAT AacttgcaaaattaaatccacgccaaattTATAAGTTCAAatatgtttct taaaatttcctGTAAATTTActtcttttgataaaaattagcCTGTTCAGG GCCTTTTTTAACTGATTTTTGGCCGTTCGCTAAATTAAATTTATGCGTta tatttgaaaacattaattagcgaaaataaatccataaaaattttcgcgat tttttatATCTCGAAGTTATATCTCATATGAAAATTAACCCAATTAAAGT TAGACCTGAATATCACGAAAAAAGTTAACAGCCTAGGattagccaaaatt tactggttccttcacccccttctcacagacgcgttggaattttatcaaac agtgggggtaaaaataacggacaaaaactcaacggggattgatattttca tttttatggcttgggatttcattgttttctatcaagaaaattcagtgggg atggaaaaatagcacaatattttgcagtggtgATTTGCTCGTCTAactat tttcagcggggacaaaaattagagactggggacaatattttggccaattg acccaatagctcattggttggaagtgacgtaaaagcagtcaatacgtcac tttcaaccaatcagctattagGTGGAACGGAatacattgcaatggtgcat atcatgaattgggaaatcagtttttttattaatttgttTATTTCTCAGAC CGAATCAGGACGGATCTTCTCAATTTGATCAGGGCAAAAAGCATTCCCGA ATTTTACACCACGTTATCGAAAACCAGTCATCTTCTAACCATATCTCAAA TCAAAGAGCTACAAACTTGTGCAGTCCAAGAAAACAATCCGGCTATTCTG ACTTATCTTCTAACCAAACATAACTTGGAGATCATAGAGGCTGATTACAT AAGACTTTTTACAAAGGCATTGAGAATGTACAAAAACAAGCCAACTGAAA TATCACCATGCATACCAGTGTTACTGAAATTTCATCCTAAATTACTGGTA ACTAGGCTTCCAGAAATGAAGAATGGAACAGCATTTCATTGTGCTCTCTC AgatggaaatttcactttaTTCAATTATTTATTGAATTATAAGGAAGAAa ctgatttgaaaaatttcgatgTATCAACATTTGAGAATCTACACGGCGAT GAGAAAAAGATGGTGAAAAAGTTGGTGAAGGATAAAAGGTATGTTTTTTT GATATCACATTTCGTATGATCTACattccctaattttcaaaagtgaatct aattagtttcaatctaggggtgccgggtatgtgcgagccataagggtccc tttttcacacccacGAAAGTCCctcaaaaatcattaaaaagtaatcgagt ctctgtaagggttccaaaattacaaaataaaaaatctactCTCTCAGAGG CTcataaattattgaaatttaGACTAAAATTTGGTgactgaattaaaaaa aatttaattgaaattctaagaaaacttgaaatattATTGATCTTAAACTT TTCAGAATTTGGAAGAAGAAAggctaacttgaattttgagctatcattca ttaattggttcaaaagttataaagaaAATACGAAAACTTTGTTAAAAAAC GTCTGATAGCATTTTTAGTTTTCTGTGAGTGTTCATTTGAActtgtactc ttaggtgccaaataaacgccccccccccgcttgttaatttttcgaaaatt ttccaatctcCCCCCCCCCACCTTATTAGGACAcctccgtttattaattt ttaagaatattttcagttagcAAGAAGAAGTCGCCtcattttgcttcaaa aaacctgattttagcctatatttaccttatttttgggttttcagaaatAC AAtctccaaccccccggcaattatatccccccgtttattcgagcccctcc cgtttatttggcacctaagagtacattgATTTTGAAACACTCGTTGTGCa agactttaaatttcattttgcaTTATTTTTTCCGAAAAACCGAGAAAATA AGGTAGAAAATTCTCTGATTAATAATTCTCTGATTTCTTTTCTAGGAAAC TACAAGGCGATGGTGGAGGATTTCTTGAAAAGCTTGGATTataagttttt agttttttgagaatattttgtCAACACAACAGTtgactttctttgaaaat attttaaatatttacgGATACGCGTATGTAATCATATTAATAAAAACATT AATCAAATTCGAGTATAAACTATTTACAGTCATTATGCATTTAGTatatt ttatttacaaaaaaaattacatttgaacatcaaaatatattcaaaatatc agtaattaaaatcaattttcttcattCAATATAATGTAAGCAAATATGTA AGCAAATATGTCTTTTGGGCCACAATTTTATAGTGTTATGTCTTATTCTA CGTTCGGCCAACGTGGGATGATATTTTCACATTTGAAGGAATGATTACGA TCTATGGCTTTCACCATACATGGTAGAAAAGCCACCTCGTAGAGAGCAAA CTCGGATTTACATCAAGTATTTAATGCACGAGAAGTATTATTGTAATATT TTATAAAAGGTTCATTCCAATATgcatttgaaaatcttttacaacACAGT TTACGTAATTATACGATGAATTCAAAAGTTCAATAGAATAAGGTATCAAA AAGCAGTGTTCAAGTTTAAAATCTTTAATAGAAAAAACTGTTAATAAAAT TCACGAAATCCCTAAAATCAGGATGTAGACATGAAATTATAATCACAGCC AGATCTAAACATTTTATTTACAACAGGGCATTGATTGGTGCCTACAGCTA CTTTTTCaagtattgggcttttccagaaaaaaaattgaatatgggggtgg aggatatgttttttggaaatttaccccggaAAACAGAGcttacccctgga cattcaaaactacccctaaacagagcaaattttccccaaaaacaaggcaa atttcgcagatttttc

Coding sequence (CDS) from alignment at sc0000393:224681..229796+

>TCONS_00021714 ID=TCONS_00021714|Name=TCONS_00021714|organism=Clytia hemisphaerica|type=CDS|length=5562bp|location=Sequence derived from alignment at sc0000393:224681..229796+ (Clytia hemisphaerica)
ATGAGTGGAAAAGATGTGATGGTTGGATGCGTGAATGTCATGTGCGGTTT
TCACAAAGGGAAATGTCACAAACTAGAAGATTTACTAAGTCATTCATTCC
GTTGTGGGAACTTGGAGCTGTGTGCCAAGATGGATGAGAGTAAATACAAC
AGTGCAATATCGAAGTGTGGAGACGCTGAAAGATCTCTTGATACAACTCG
GTTAAAAGTCGAAGAcgctgaaaaagaaatttctcaATTTGAAAAAGAGT
CAAAAGAACTTAATGCAAAGATTGAAATAACTCGAAGgTTCAACAACGAG
GTCATCGAATTGGAGGATCGAAACTTAACACCGAATGCCTTGCCAAGGGA
AATGAatgttgaagaaaaagaaggcaCCCGAAACAATGACCGAATCAGGA
CGGATCTTCTCAATTTGATCAGGGCAAAAAGCATTCCCGAATTTTACACC
ACGTTATCGAAAACCAGTCATCTTCTAACCATATCTCAAATCAAAGAGCT
ACAAACTTGTGCAGTCCAAGAAAACAATCCGGCTATTCTGACTTATCTTC
TAACCAAACATAACTTGGAGATCATAGAGGCTGATTACATAAGACTTTTT
ACAAAGGCATTGAGAATGTACAAAAACAAGCCAACTGAAATATCACCATG
CATACCAGTGTTACTGAAATTTCATCCTAAATTACTGGTAACTAGGCTTC
CAGAAATGAAGAATGGAACAGCATTTCATTGTGCTCTCTCAgatggaaat
ttcactttaTTCAATTATTTATTGAATTATAAGGAAGAAactgatttgaa
aaatttcgatgTATCAACATTTGAGAATCTACACGGCGATGAGAAAAAGA
TGGTGAAAAAGTTGGTGAAGGATAAAAGGAAACTACAAGGCGATGGTGGA
GGATTTCTTGAAAAGCTTGGATTataaATGAGTGGAAAAGATGTGATGGT
TGGATGCGTGAATGTCATGTGCGGTTTTCACAAAGGGAAATGTCACAAAC
TAGAAGATTTACTAAGTCATTCATTCCGTTGTGGGAACTTGGAGCTGTGT
GCCAAGATGGATGAGAGTAAATACAACAGTGCAATATCGAAGTGTGGAGA
CGCTGAAAGATCTCTTGATACAACTCGGTTAAAAGTCGAAGAcgctgaaa
aagaaatttctcaATTTGAAAAAGAGTCAAAAGAACTTAATGCAAAGATT
GAAATAACTCGAAGgTTCAACAACGAGGTCATCGAATTGGAGGATCGAAA
CTTAACACCGAATGCCTTGCCAAGGGAAATGAatgttgaagaaaaagaag
gcaCCCGAAACAATGACCGAATCAGGACGGATCTTCTCAATTTGATCAGG
GCAAAAAGCATTCCCGAATTTTACACCACGTTATCGAAAACCAGTCATCT
TCTAACCATATCTCAAATCAAAGAGCTACAAACTTGTGCAGTCCAAGAAA
ACAATCCGGCTATTCTGACTTATCTTCTAACCAAACATAACTTGGAGATC
ATAGAGGCTGATTACATAAGACTTTTTACAAAGGCATTGAGAATGTACAA
AAACAAGCCAACTGAAATATCACCATGCATACCAGTGTTACTGAAATTTC
ATCCTAAATTACTGGTAACTAGGCTTCCAGAAATGAAGAATGGAACAGCA
TTTCATTGTGCTCTCTCAgatggaaatttcactttaTTCAATTATTTATT
GAATTATAAGGAAGAAactgatttgaaaaatttcgatgTATCAACATTTG
AGAATCTACACGGCGATGAGAAAAAGATGGTGAAAAAGTTGGTGAAGGAT
AAAAGGAAACTACAAGGCGATGGTGGAGGATTTCTTGAAAAGCTTGGATT
ataaATGAGTGGAAAAGATGTGATGGTTGGATGCGTGAATGTCATGTGCG
GTTTTCACAAAGGGAAATGTCACAAACTAGAAGATTTACTAAGTCATTCA
TTCCGTTGTGGGAACTTGGAGCTGTGTGCCAAGATGGATGAGAGTAAATA
CAACAGTGCAATATCGAAGTGTGGAGACGCTGAAAGATCTCTTGATACAA
CTCGGTTAAAAGTCGAAGAcgctgaaaaagaaatttctcaATTTGAAAAA
GAGTCAAAAGAACTTAATGCAAAGATTGAAATAACTCGAAGgTTCAACAA
CGAGGTCATCGAATTGGAGGATCGAAACTTAACACCGAATGCCTTGCCAA
GGGAAATGAatgttgaagaaaaagaaggcaCCCGAAACAATGACCGAATC
AGGACGGATCTTCTCAATTTGATCAGGGCAAAAAGCATTCCCGAATTTTA
CACCACGTTATCGAAAACCAGTCATCTTCTAACCATATCTCAAATCAAAG
AGCTACAAACTTGTGCAGTCCAAGAAAACAATCCGGCTATTCTGACTTAT
CTTCTAACCAAACATAACTTGGAGATCATAGAGGCTGATTACATAAGACT
TTTTACAAAGGCATTGAGAATGTACAAAAACAAGCCAACTGAAATATCAC
CATGCATACCAGTGTTACTGAAATTTCATCCTAAATTACTGGTAACTAGG
CTTCCAGAAATGAAGAATGGAACAGCATTTCATTGTGCTCTCTCAgatgg
aaatttcactttaTTCAATTATTTATTGAATTATAAGGAAGAAactgatt
tgaaaaatttcgatgTATCAACATTTGAGAATCTACACGGCGATGAGAAA
AAGATGGTGAAAAAGTTGGTGAAGGATAAAAGGAAACTACAAGGCGATGG
TGGAGGATTTCTTGAAAAGCTTGGATTataaATGAGTGGAAAAGATGTGA
TGGTTGGATGCGTGAATGTCATGTGCGGTTTTCACAAAGGGAAATGTCAC
AAACTAGAAGATTTACTAAGTCATTCATTCCGTTGTGGGAACTTGGAGCT
GTGTGCCAAGATGGATGAGAGTAAATACAACAGTGCAATATCGAAGTGTG
GAGACGCTGAAAGATCTCTTGATACAACTCGGTTAAAAGTCGAAGAcgct
gaaaaagaaatttctcaATTTGAAAAAGAGTCAAAAGAACTTAATGCAAA
GATTGAAATAACTCGAAGgTTCAACAACGAGGTCATCGAATTGGAGGATC
GAAACTTAACACCGAATGCCTTGCCAAGGGAAATGAatgttgaagaaaaa
gaaggcaCCCGAAACAATGACCGAATCAGGACGGATCTTCTCAATTTGAT
CAGGGCAAAAAGCATTCCCGAATTTTACACCACGTTATCGAAAACCAGTC
ATCTTCTAACCATATCTCAAATCAAAGAGCTACAAACTTGTGCAGTCCAA
GAAAACAATCCGGCTATTCTGACTTATCTTCTAACCAAACATAACTTGGA
GATCATAGAGGCTGATTACATAAGACTTTTTACAAAGGCATTGAGAATGT
ACAAAAACAAGCCAACTGAAATATCACCATGCATACCAGTGTTACTGAAA
TTTCATCCTAAATTACTGGTAACTAGGCTTCCAGAAATGAAGAATGGAAC
AGCATTTCATTGTGCTCTCTCAgatggaaatttcactttaTTCAATTATT
TATTGAATTATAAGGAAGAAactgatttgaaaaatttcgatgTATCAACA
TTTGAGAATCTACACGGCGATGAGAAAAAGATGGTGAAAAAGTTGGTGAA
GGATAAAAGGAAACTACAAGGCGATGGTGGAGGATTTCTTGAAAAGCTTG
GATTataaATGAGTGGAAAAGATGTGATGGTTGGATGCGTGAATGTCATG
TGCGGTTTTCACAAAGGGAAATGTCACAAACTAGAAGATTTACTAAGTCA
TTCATTCCGTTGTGGGAACTTGGAGCTGTGTGCCAAGATGGATGAGAGTA
AATACAACAGTGCAATATCGAAGTGTGGAGACGCTGAAAGATCTCTTGAT
ACAACTCGGTTAAAAGTCGAAGAcgctgaaaaagaaatttctcaATTTGA
AAAAGAGTCAAAAGAACTTAATGCAAAGATTGAAATAACTCGAAGgTTCA
ACAACGAGGTCATCGAATTGGAGGATCGAAACTTAACACCGAATGCCTTG
CCAAGGGAAATGAatgttgaagaaaaagaaggcaCCCGAAACAATGACCG
AATCAGGACGGATCTTCTCAATTTGATCAGGGCAAAAAGCATTCCCGAAT
TTTACACCACGTTATCGAAAACCAGTCATCTTCTAACCATATCTCAAATC
AAAGAGCTACAAACTTGTGCAGTCCAAGAAAACAATCCGGCTATTCTGAC
TTATCTTCTAACCAAACATAACTTGGAGATCATAGAGGCTGATTACATAA
GACTTTTTACAAAGGCATTGAGAATGTACAAAAACAAGCCAACTGAAATA
TCACCATGCATACCAGTGTTACTGAAATTTCATCCTAAATTACTGGTAAC
TAGGCTTCCAGAAATGAAGAATGGAACAGCATTTCATTGTGCTCTCTCAg
atggaaatttcactttaTTCAATTATTTATTGAATTATAAGGAAGAAact
gatttgaaaaatttcgatgTATCAACATTTGAGAATCTACACGGCGATGA
GAAAAAGATGGTGAAAAAGTTGGTGAAGGATAAAAGGAAACTACAAGGCG
ATGGTGGAGGATTTCTTGAAAAGCTTGGATTataaATGAGTGGAAAAGAT
GTGATGGTTGGATGCGTGAATGTCATGTGCGGTTTTCACAAAGGGAAATG
TCACAAACTAGAAGATTTACTAAGTCATTCATTCCGTTGTGGGAACTTGG
AGCTGTGTGCCAAGATGGATGAGAGTAAATACAACAGTGCAATATCGAAG
TGTGGAGACGCTGAAAGATCTCTTGATACAACTCGGTTAAAAGTCGAAGA
cgctgaaaaagaaatttctcaATTTGAAAAAGAGTCAAAAGAACTTAATG
CAAAGATTGAAATAACTCGAAGgTTCAACAACGAGGTCATCGAATTGGAG
GATCGAAACTTAACACCGAATGCCTTGCCAAGGGAAATGAatgttgaaga
aaaagaaggcaCCCGAAACAATGACCGAATCAGGACGGATCTTCTCAATT
TGATCAGGGCAAAAAGCATTCCCGAATTTTACACCACGTTATCGAAAACC
AGTCATCTTCTAACCATATCTCAAATCAAAGAGCTACAAACTTGTGCAGT
CCAAGAAAACAATCCGGCTATTCTGACTTATCTTCTAACCAAACATAACT
TGGAGATCATAGAGGCTGATTACATAAGACTTTTTACAAAGGCATTGAGA
ATGTACAAAAACAAGCCAACTGAAATATCACCATGCATACCAGTGTTACT
GAAATTTCATCCTAAATTACTGGTAACTAGGCTTCCAGAAATGAAGAATG
GAACAGCATTTCATTGTGCTCTCTCAgatggaaatttcactttaTTCAAT
TATTTATTGAATTATAAGGAAGAAactgatttgaaaaatttcgatgTATC
AACATTTGAGAATCTACACGGCGATGAGAAAAAGATGGTGAAAAAGTTGG
TGAAGGATAAAAGGAAACTACAAGGCGATGGTGGAGGATTTCTTGAAAAG
CTTGGATTataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012182XLOC_012182Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021714-proteinTCONS_00021714-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021714-exon-sc0000393-1491911889:224681..224798TCONS_00021714-exon-sc0000393-1491911889:224681..224798Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:224681..224798TCONS_00021714-exon-sc0000393-1510915933:224681..224798Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:224681..224798TCONS_00021714-exon-sc0000393-1575043694:224681..224798Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1491911889:225321..225541TCONS_00021714-exon-sc0000393-1491911889:225321..225541Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:225321..225541TCONS_00021714-exon-sc0000393-1510915933:225321..225541Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:225321..225541TCONS_00021714-exon-sc0000393-1575043694:225321..225541Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1491911889:225918..225977TCONS_00021714-exon-sc0000393-1491911889:225918..225977Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:225918..225977TCONS_00021714-exon-sc0000393-1510915933:225918..225977Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:225918..225977TCONS_00021714-exon-sc0000393-1575043694:225918..225977Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1491911889:226390..226430TCONS_00021714-exon-sc0000393-1491911889:226390..226430Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:226390..226430TCONS_00021714-exon-sc0000393-1510915933:226390..226430Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:226390..226430TCONS_00021714-exon-sc0000393-1575043694:226390..226430Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1491911889:227529..228018TCONS_00021714-exon-sc0000393-1491911889:227529..228018Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:227529..228018TCONS_00021714-exon-sc0000393-1510915933:227529..228018Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:227529..228018TCONS_00021714-exon-sc0000393-1575043694:227529..228018Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1491911889:228876..229796TCONS_00021714-exon-sc0000393-1491911889:228876..229796Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1510915933:228876..229796TCONS_00021714-exon-sc0000393-1510915933:228876..229796Clytia hemisphaericaexon
TCONS_00021714-exon-sc0000393-1575043694:228876..229796TCONS_00021714-exon-sc0000393-1575043694:228876..229796Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:224681..229796 +
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.8403 26.8849 9.9943 8.66289 4.92423 3.59413 6.80572 6.84057 6.04483 4.87138 5.47255 4.51838 4.75857 3.91199 5.44078 4.3248 11.9914 14.1195 4.73143 4.98465 7.12747 7.82558 16.1815 15.6432 5.4283 6.63499 4.74832 3.00375 8.3072 8.92224
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021714 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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