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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021693 ID=TCONS_00021693|Name=TCONS_00021693|organism=Clytia hemisphaerica|type=transcript|length=634bp
TAACATACAGCTGCTGATCAGCACTTAGGATTGTCTTATGCTTGAAGCTA
TGTGCATGGATTCGGTTGGTTGGCTCACACAtcgtaaaaaaagaaatatg
tttGACCGACTGGTGTGTTTGATTGCGTTTCTGGCTGCTTTTCAAACTGC
TTTGATAGAAGCTGGAAGTGCTGAAGAGAGTATTTCTAATGGCACCACAC
NGGTTCTCAGGGGGTTTAATTCTAGAAACAACGAAACACAGTAAAACTGT
AAAGAGAGATCTTTACATTTCCGTAGTTTTTTTACGGAACTTTACTAAGG
ATCTCAGGATTGGCATGGAGGTTACCGCCTGGTAGCCTATTTTCAACTAG
ATTTTCCACTTTTGAACAGTGAACGACGACAAGTACGCATACCATCAAGG
TGACCCACGAATCTTAACAATCAATAATGTAGGATACGGTGATCGTGATT
GGTACACTTGCACATCAACATCNGGCTCCTCGTGGTAAAGGAGTTAAAAT
CGTATGGACAGCTGAGAAGAATACTATAAATGCCGAAGTCAATGGTATGT
GATTATATTTATTTGTTAAAttttaaacctcgtgggacacttggGCTCTC
ATAAAACAAAGACTTATTgttgactctctctcta Run BLAST on NCBI transcript from alignment at sc0000393:88187..89491+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021693 ID=TCONS_00021693|Name=TCONS_00021693|organism=Clytia hemisphaerica|type=transcript|length=1305bp|location=Sequence derived from alignment at sc0000393:88187..89491+ (Clytia hemisphaerica)
TAACATACAGCTGCTGATCAGCACTGTgagtgttttttgttttttcttct
gcATTAAGAACACTTTCTATTagcattttatattttttaattccaATCGT
TAAATCTTTAATcaagaaatttgtaaaatctacCCATTTAAtcacttttc
agaaaaaaattacctcTAGCCTAAGGGGACATTGAGTCGCTCAGGCTCTT
GAAAGTTTATGCTACATAGACTCAAAATCTTTCTTATAATACAATTTAGA
GTATTTCTGATAGGGATGATTTACTGATTTATACATCCTTTATtatcaaa
aacctttttttcttaTCTTGCAATAGTAGGATTGTCTTATGCTTGAAGCT
ATGTGCATGGATTCGGTTGGTTGGCTCACACAtcgtaaaaaaagaaatat
gtttGACCGACTGGTGTGTTTGATTGCGTTTCTGGCTGCTTTTCAAACTG
CTTTGATAGAAGGTACTTTATTTGATACTtctaaatcttttaaaaaacta
TTTCTATGATGTGTGCtctttttcaggaatttttagATAACCTTTTGGTT
TATTCATAACTTATTAATAAGTTAAGTTAAATTTTTGAGAGCCTACCCTT
TGGAAGACTAAAGACttaatcaaatatttttaacaaattgtatctaaagt
tttgaaaattttcttattcatgatatgcaccattgcaatgtcttctgaca
tcaCACCagagacccaacagctgattggttgttcAACCAATCAGTTGCCC
GGTCCGTGGAAGATATTgcagtgttgcatatcatgaattgcaatggtgca
tataatGAATTGACCACTTTTCTTATTTATAGCTGGAAGTGCTGAAGAGA
GTATTTCTAATGGCACCACACNGGTTCTCAGGGGGTTTAATTCTAGAAAC
AACGAAACACAGTAAAACTGTAAAGAGAGATCTTTACATTTCCGTAGTTT
TTTTACGGAACTTTACTAAGGATCTCAGGATTGGCATGGAGGTTACCGCC
TGGTAGCCTATTTTCAACTAGATTTTCCACTTTTGAACAGTGAACGACGA
CAAGTACGCATACCATCAAGGTGACCCACGAATCTTAACAATCAATAATG
TAGGATACGGTGATCGTGATTGGTACACTTGCACATCAACATCNGGCTCC
TCGTGGTAAAGGAGTTAAAATCGTATGGACAGCTGAGAAGAATACTATAA
ATGCCGAAGTCAATGGTATGTGATTATATTTATTTGTTAAAttttaaacc
tcgtgggacacttggGCTCTCATAAAACAAAGACTTATTgttgactctct
ctcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021693-exon-sc0000393-1491911889:88187..88211 | TCONS_00021693-exon-sc0000393-1491911889:88187..88211 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1510915933:88187..88211 | TCONS_00021693-exon-sc0000393-1510915933:88187..88211 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1575043694:88187..88211 | TCONS_00021693-exon-sc0000393-1575043694:88187..88211 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1491911889:88513..88648 | TCONS_00021693-exon-sc0000393-1491911889:88513..88648 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1510915933:88513..88648 | TCONS_00021693-exon-sc0000393-1510915933:88513..88648 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1575043694:88513..88648 | TCONS_00021693-exon-sc0000393-1575043694:88513..88648 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1491911889:89019..89491 | TCONS_00021693-exon-sc0000393-1491911889:89019..89491 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1510915933:89019..89491 | TCONS_00021693-exon-sc0000393-1510915933:89019..89491 | Clytia hemisphaerica | exon |
| TCONS_00021693-exon-sc0000393-1575043694:89019..89491 | TCONS_00021693-exon-sc0000393-1575043694:89019..89491 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000393 | supercontig | sc0000393:88187..89491 + |
Blast
The following BLAST results are available for this feature:
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