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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021661 ID=TCONS_00021661|Name=TCONS_00021661|organism=Clytia hemisphaerica|type=transcript|length=4271bp GTTTtggaagtaaaaaaataaaataacaaaaattgaagtttgaaaaaaaa aaataataattttttagaattttgataaaataaatttagGAAGTTTACAA AATAATCAATTAGTTTTAACTATGTTTACTAATAATGACGCCCGAAAAAA ATTAAGGTCTCAATATCCAAAAAAGGGGATAGCCTCAAATTTAATGGAAT ATTTTAAGTTATGAACATCCTACCACGTGGCTTTTAAATATTGACTGGTA CACACTGTTTATGAGATTCAGTAAAATTTATCTTATTGGGAAAATTTCAG TCTCCCCGACAGGGACAGGGAAAGTAAGtaatttcatctaaaattttgaa attttgaacctcATTTACTTATAAAAATCAATACTCCCAGAGTCAGCTCT TACGACTATGAGAAGGCAGTAcgtgagtgaaaaaaaaaaattattcaatt acTAAACTGCAGGAGTTAAAGTTCACATGATTTTGGCTTTTGAATCTGTG GAACTTAATATTCTTAATAAACAGACGTAATGAAACGGAGTACTGTTAAa gttacagttgacgctctctaatccgACATTTTACTATTCGAGACGCTCCA TAAttcaataatattgaaagtcgccATTAACTAAAGACGCTTAACCATTC GATATGCTCCCTCATTCGATGAAAATGGAACTCTATAGATTGTCAACTAT AATGTTAAATTTACAGTAGGCGCTCACTCATTCGAACTTCTACACTTCGa actttttcataatttgaacTTATTACCCGTCCCCGTCAAGGATAAACatt cttaaaatactttctttttcatgatatgcaccattgcaatgtcttccacg gacccaacagttgattggttagaagtgacgtattaactgattttatgtga tttacaaccaatcagctattgggtccatgatgtaatgtcagaagacatta aAATGgagcatatcatgaataattcGATTCCCTGTTCGAGTTCAAATTAG CGAGAATCATCTGCATTTAAAATAAcgcaaaaatgcaaaatatccTTTCA GCATCATACAaaaccatttttcttttgaatctgAAGTGTCAATGAGCCTC CGTTCCCGTTCAACGGCGTGTGTACAATCTCTTCAACCTCACTATCACGC CGTGATCCCGGATATTTAGTCAGCTTACGTTTCAAATAAACATCCAAACT TATCCCAATCACAAAGAGAACAAATATAGCTCCAAGTAAACCCTGCACGA AAACAGATTTGAATAGATCAGCCACCGACTCAATATATAAAGTTTCGGTC GGGCAATAACGTCCGTATTTGATTTTAGCACGTTCGTAGACTTCTGTTTT GAATTCGTGCATACACCGTATGATGGGTTTGAACTCGTCCGGTATGTGCA GTGAAAACACCATATTCAGGTTTAAACGTGTCGGTAACAACATTACGATA CGTAAAGGGTTCTTAACGTCGTCGTTTTGTATGTCGTCGATATTCCACGC TGCTATTTCAGCGTTGACAGCACCCGCGTAAACATCGCCACGTCGGACAG CGGCGTATACTTCTTCGTACGTTGGACAAGGATACGGGATACCACGAAAG TCTGAAAACACTCGTTCTGCTTCCGTTGAGTTTTCCAAGACGGCAATTTT CTTTCCTGTAATGGATAAGTCACTAACGCCGTTCACCACTTCTGCGACAG TTGCCGTCACGATACACGCAATCATGACGCCGATACAAACCCAGACGACG GCGATACAACGTCCGAAAACAGAATTCGGGACAACGTCACCGTAACCGAC TGTTGTCATAGAAACAAAACTCCACCAAACTCCTGTCCCGGTCCCGATAA AACAGGAATCGGGAAACGCCGGATTATTAACACGTTCCGATAACCAGATA AGAACACCGAAAAATATAGTCATTAGAAAAGTCATGAAGAAAATCTGTCC ACAACTGATGATGCCTCGGAATATTTTGTACGGTAGTGAAATGTAATCAC GGTGCACAATTACAGCTAAGTTCTCTGCTTTATCAATATCAAAATTAATg aacagttttttttcttcaactttgATCATATAGTCGTCCCGTTGATAAAT CGCCGGTAGGTAGATATCACGTCCTGGTACCAAACCCGGTGGATATTGTC CAGCTTTGTAAAGTTCCATGAAACTACGACGCGAAGTTTGACCAAAAGTT TCGAAATCGATCATTCTAGTCGCGTTGTACATTTGAAATAAGGTTCGATT ACGGCCACACATTTTCATGGCGTTAGCGAAAATTTGCGGATAGAATCCGT CGATTTCTCCCTTGTCGTTACGATAGATGTACGGCTTGACTTCCCAAAAT ACGGCAGTGAAAATAGCGTTCCCGTTACGTTTTGCTGTGATGGCGCGACC CTTGGCGCCGTGTCCTTTACCGCAGCTCATGGTCCCGTTGATTTCTTTAC AAGGTTTAGGAGTAGTTGTCATTAAATCATCAAAACTGGTTCGTGTGTTA TTCAGTGTCATATTATAAGTTTCCGTATATAATAAAAGCGCGTTGAATAA CGCTAACCTCCAAAGTATATTCATGGTAGTGCTCGGAAATAAAATCACCG TAGGTATATTTCATCCAATAAAAATCAAGCCATATAAGAGTTTTGAATGG TTGCTATGATCTCCTAATGTTGCTGGTCTCGTGCAGGAGGTCTTTCGATC AAGCTGCAAGTGCACAAAAGCAGTTTGATGGTTGCAGCATTTATATTGAG TNagttttttttcttcaactttgATCATATAGTCGTCCCGTTGATAAATC GCCGGTAGGTAGATATCACGTCCTGGTACCAAACCCGGTGGATATTGTCC AGCTTTGTAAAGTTCCATGAAACTACGACGCGAAGTTTGACCAAAAGTTT CGAAATCGATCATTCTAGTCGCGTTGTACATTTGAAATAAGGTTCGATTA CGGCCACACATTTTCATGGCGTTAGCGAAAATTTGCGGATAGAATCCGTC GATTTCTCCCTTGTCGTTACGATAGATGTACGGCTTGACTTCCCAAAATA CGGCAGTGAAAATAGCGTTCCCGTTACGTTTTGCTGTGATGGCGCGACCC TTGGCGCCGTGTCCTTTACCGCAGCTCATGGTCCCGTTGATTTCTTTACA AGGTTTAGGAGTAGTTGTCATTAAATCATCAAAACTGGTTCGTGTGTTAT TCAGTGTCATATTATAAGTTTCCGTATATAATAAAAGCGCGTTGAATAAC GCTAACCTCCAAAGTATATTCATGGTAGTGCTCGGAAATAAAATCACCGT AGGTATATTTCATCCAATAAAAATCAAGCCATATAAGAGTTTTGAATGGT TGCTATGATCTCCTAATGTTGCTGGTCTCGTGCAGGAGGTCTTTCGATCA AGCTGCAAGTGCACAAAAGCAGTTTGATGGTTGCAGCATTTATATTGAGT ACTGCTCCCAAATACGTGTCTTgaagagagagagaaagagataAATTATA AATAAAGAAATCCATAAAACATTTGTCCAAGTCCCAGAATGGATTTAATA GAAAGCGAAGGCGTCATACAAAAAAAGTACAACAACTTTAGGAAAGGTTG ATTGAGTAACCTTTGCACGTAATAATTCATGAATATGTAAAAAATAGAAT AGAATGCAAatgtattgaaaagaaatcggAAAAACCTTTTTGATTCGTAA TTCTTTTATTGTGGCTAGGGACATACAAACTTCGATTCGATTTGTTGACT TCGACTTGACAACTGATATCAAAAGACAATGTTTGATTCGGTTTAACGGC GCATGGCGGTCCCATATGCGattgaattctttttttacttcaacttcaaa atttcatttgttcttcttttttgtgAGCTCTTGAAATCTGTCAGCGATAG GTCAAGTTTAAAGAAGTGATAGAGGATAAACACAGTCAATAGTTATCAAT AATGAATAACGATACGAAACTACGAGCTTCTTTTTCgatgaaattttgtt tgtagcagaaaaatctttgaagcaAACACAGCGATTCTCCTTCTTTTGAC GGCTGTCTTTCCAGACTGCAATTGTTTCCACAAGATCAAGTTGTTTCAAT GTGTAGTCAAAATGATGACAAACCTTTTTAACAGCGAAATacttattttc caaaatttgttttCGTTAGCAGAACGCAGGGCGTGGAATCTTCTTGTAAT GTTTTTTTACGCTGTTTTCTTAAAACTCCATGCATCCAATAGAGAATGAC ATAACAATATCACCTACTGAG Run BLAST on NCBI protein sequence of TCONS_00021661-protein >TCONS_00021661-protein ID=TCONS_00021661-protein|Name=TCONS_00021661-protein|organism=Clytia hemisphaerica|type=polypeptide|length=506bp
MNILWRLALFNALLLYTETYNMTLNNTRTSFDDLMTTTPKPCKEINGTMS CGKGHGAKGRAITAKRNGNAIFTAVFWEVKPYIYRNDKGEIDGFYPQIFA NAMKMCGRNRTLFQMYNATRMIDFETFGQTSRRSFMELYKAGQYPPGLVP GRDIYLPAIYQRDDYMIKVEEKKLFINFDIDKAENLAVIVHRDYISLPYK IFRGIISCGQIFFMTFLMTIFFGVLIWLSERVNNPAFPDSCFIGTGTGVW WSFVSMTTVGYGDVVPNSVFGRCIAVVWVCIGVMIACIVTATVAEVVNGV SDLSITGKKIAVLENSTEAERVFSDFRGIPYPCPTYEEVYAAVRRGDVYA GAVNAEIAAWNIDDIQNDDVKNPLRIVMLLPTRLNLNMVFSLHIPDEFKP IIRCMHEFKTEVYERAKIKYGRYCPTETLYIESVADLFKSVFVQGLLGAI FVLFVIGISLDVYLKRKLTKYPGSRRDSEVEEIVHTPLNGNGGSLTLQIQ KKNGFV Run BLAST on NCBI transcript from alignment at sc0000391:98244..102514 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021661 ID=TCONS_00021661|Name=TCONS_00021661|organism=Clytia hemisphaerica|type=transcript|length=4271bp|location=Sequence derived from alignment at sc0000391:98244..102514 (Clytia hemisphaerica) CTCAGTAGGTGATATTGTTATGTCATTCTCTATTGGATGCATGGAGTTTT
AAGAAAACAGCGTAAAAAAACATTACAAGAAGATTCCACGCCCTGCGTTC
TGCTAACGaaaacaaattttggaaaataagtATTTCGCTGTTAAAAAGGT
TTGTCATCATTTTGACTACACATTGAAACAACTTGATCTTGTGGAAACAA
TTGCAGTCTGGAAAGACAGCCGTCAAAAGAAGGAGAATCGCTGTGTTtgc
ttcaaagatttttctgctacaaacaaaatttcatcGAAAAAGAAGCTCGT
AGTTTCGTATCGTTATTCATTATTGATAACTATTGACTGTGTTTATCCTC
TATCACTTCTTTAAACTTGACCTATCGCTGACAGATTTCAAGAGCTcaca
aaaaagaagaacaaatgaaattttgaagttgaagtaaaaaaagaattcaa
tCGCATATGGGACCGCCATGCGCCGTTAAACCGAATCAAACATTGTCTTT
TGATATCAGTTGTCAAGTCGAAGTCAACAAATCGAATCGAAGTTTGTATG
TCCCTAGCCACAATAAAAGAATTACGAATCAAAAAGGTTTTTccgatttc
ttttcaatacatTTGCATTCTATTCTATTTTTTACATATTCATGAATTAT
TACGTGCAAAGGTTACTCAATCAACCTTTCCTAAAGTTGTTGTACTTTTT
TTGTATGACGCCTTCGCTTTCTATTAAATCCATTCTGGGACTTGGACAAA
TGTTTTATGGATTTCTTTATTTATAATTtatctctttctctctctcttcA
AGACACGTATTTGGGAGCAGTACTCAATATAAATGCTGCAACCATCAAAC
TGCTTTTGTGCACTTGCAGCTTGATCGAAAGACCTCCTGCACGAGACCAG
CAACATTAGGAGATCATAGCAACCATTCAAAACTCTTATATGGCTTGATT
TTTATTGGATGAAATATACCTACGGTGATTTTATTTCCGAGCACTACCAT
GAATATACTTTGGAGGTTAGCGTTATTCAACGCGCTTTTATTATATACGG
AAACTTATAATATGACACTGAATAACACACGAACCAGTTTTGATGATTTA
ATGACAACTACTCCTAAACCTTGTAAAGAAATCAACGGGACCATGAGCTG
CGGTAAAGGACACGGCGCCAAGGGTCGCGCCATCACAGCAAAACGTAACG
GGAACGCTATTTTCACTGCCGTATTTTGGGAAGTCAAGCCGTACATCTAT
CGTAACGACAAGGGAGAAATCGACGGATTCTATCCGCAAATTTTCGCTAA
CGCCATGAAAATGTGTGGCCGTAATCGAACCTTATTTCAAATGTACAACG
CGACTAGAATGATCGATTTCGAAACTTTTGGTCAAACTTCGCGTCGTAGT
TTCATGGAACTTTACAAAGCTGGACAATATCCACCGGGTTTGGTACCAGG
ACGTGATATCTACCTACCGGCGATTTATCAACGGGACGACTATATGATca
aagttgaagaaaaaaaactNACTCAATATAAATGCTGCAACCATCAAACT
GCTTTTGTGCACTTGCAGCTTGATCGAAAGACCTCCTGCACGAGACCAGC
AACATTAGGAGATCATAGCAACCATTCAAAACTCTTATATGGCTTGATTT
TTATTGGATGAAATATACCTACGGTGATTTTATTTCCGAGCACTACCATG
AATATACTTTGGAGGTTAGCGTTATTCAACGCGCTTTTATTATATACGGA
AACTTATAATATGACACTGAATAACACACGAACCAGTTTTGATGATTTAA
TGACAACTACTCCTAAACCTTGTAAAGAAATCAACGGGACCATGAGCTGC
GGTAAAGGACACGGCGCCAAGGGTCGCGCCATCACAGCAAAACGTAACGG
GAACGCTATTTTCACTGCCGTATTTTGGGAAGTCAAGCCGTACATCTATC
GTAACGACAAGGGAGAAATCGACGGATTCTATCCGCAAATTTTCGCTAAC
GCCATGAAAATGTGTGGCCGTAATCGAACCTTATTTCAAATGTACAACGC
GACTAGAATGATCGATTTCGAAACTTTTGGTCAAACTTCGCGTCGTAGTT
TCATGGAACTTTACAAAGCTGGACAATATCCACCGGGTTTGGTACCAGGA
CGTGATATCTACCTACCGGCGATTTATCAACGGGACGACTATATGATcaa
agttgaagaaaaaaaactgttcATTAATTTTGATATTGATAAAGCAGAGA
ACTTAGCTGTAATTGTGCACCGTGATTACATTTCACTACCGTACAAAATA
TTCCGAGGCATCATCAGTTGTGGACAGATTTTCTTCATGACTTTTCTAAT
GACTATATTTTTCGGTGTTCTTATCTGGTTATCGGAACGTGTTAATAATC
CGGCGTTTCCCGATTCCTGTTTTATCGGGACCGGGACAGGAGTTTGGTGG
AGTTTTGTTTCTATGACAACAGTCGGTTACGGTGACGTTGTCCCGAATTC
TGTTTTCGGACGTTGTATCGCCGTCGTCTGGGTTTGTATCGGCGTCATGA
TTGCGTGTATCGTGACGGCAACTGTCGCAGAAGTGGTGAACGGCGTTAGT
GACTTATCCATTACAGGAAAGAAAATTGCCGTCTTGGAAAACTCAACGGA
AGCAGAACGAGTGTTTTCAGACTTTCGTGGTATCCCGTATCCTTGTCCAA
CGTACGAAGAAGTATACGCCGCTGTCCGACGTGGCGATGTTTACGCGGGT
GCTGTCAACGCTGAAATAGCAGCGTGGAATATCGACGACATACAAAACGA
CGACGTTAAGAACCCTTTACGTATCGTAATGTTGTTACCGACACGTTTAA
ACCTGAATATGGTGTTTTCACTGCACATACCGGACGAGTTCAAACCCATC
ATACGGTGTATGCACGAATTCAAAACAGAAGTCTACGAACGTGCTAAAAT
CAAATACGGACGTTATTGCCCGACCGAAACTTTATATATTGAGTCGGTGG
CTGATCTATTCAAATCTGTTTTCGTGCAGGGTTTACTTGGAGCTATATTT
GTTCTCTTTGTGATTGGGATAAGTTTGGATGTTTATTTGAAACGTAAGCT
GACTAAATATCCGGGATCACGGCGTGATAGTGAGGTTGAAGAGATTGTAC
ACACGCCGTTGAACGGGAACGGAGGCTCATTGACACTTcagattcaaaag
aaaaatggtttTGTATGATGCTGAAAggatattttgcatttttgcgTTAT
TTTAAATGCAGATGATTCTCGCTAATTTGAACTCGAACAGGGAATCgaat
tattcatgatatgctcCATTttaatgtcttctgacattacatcatggacc
caatagctgattggttgtaaatcacataaaatcagttaatacgtcacttc
taaccaatcaactgttgggtccgtggaagacattgcaatggtgcatatca
tgaaaaagaaagtattttaagaatGTTTATCCTTGACGGGGACGGGTAAT
AAgttcaaattatgaaaaagttCGAAGTGTAGAAGTTCGAATGAGTGAGC
GCCTACTGTAAATTTAACATTATAGTTGACAATCTATAGAGTTCCATTTT
CATCGAATGAGGGAGCATATCGAATGGTTAAGCGTCTTTAGTTAATggcg
actttcaatattattgaaTTATGGAGCGTCTCGAATAGTAAAATGTcgga
ttagagagcgtcaactgtaactTTAACAGTACTCCGTTTCATTACGTCTG
TTTATTAAGAATATTAAGTTCCACAGATTCAAAAGCCAAAATCATGTGAA
CTTTAACTCCTGCAGTTTAgtaattgaataatttttttttttcactcacg
TACTGCCTTCTCATAGTCGTAAGAGCTGACTCTGGGAGTATTGATTTTTA
TAAGTAAATgaggttcaaaatttcaaaattttagatgaaattaCTTACTT
TCCCTGTCCCTGTCGGGGAGACTGAAATTTTCCCAATAAGATAAATTTTA
CTGAATCTCATAAACAGTGTGTACCAGTCAATATTTAAAAGCCACGTGGT
AGGATGTTCATAACTTAAAATATTCCATTAAATTTGAGGCTATCCCCTTT
TTTGGATATTGAGACCTTAATTTTTTTCGGGCGTCATTATTAGTAAACAT
AGTTAAAACTAATTGATTATTTTGTAAACTTCctaaatttattttatcaa
aattctaaaaaattattatttttttttttcaaacttcaatttttgttatt
ttatttttttacttccaAAAC Coding sequence (CDS) from alignment at sc0000391:98244..102514 >TCONS_00021661 ID=TCONS_00021661|Name=TCONS_00021661|organism=Clytia hemisphaerica|type=CDS|length=1521bp|location=Sequence derived from alignment at sc0000391:98244..102514 (Clytia hemisphaerica) ATGAATATACTTTGGAGGTTAGCGTTATTCAACGCGCTTTTATTATATAC GGAAACTTATAATATGACACTGAATAACACACGAACCAGTTTTGATGATT TAATGACAACTACTCCTAAACCTTGTAAAGAAATCAACGGGACCATGAGC TGCGGTAAAGGACACGGCGCCAAGGGTCGCGCCATCACAGCAAAACGTAA CGGGAACGCTATTTTCACTGCCGTATTTTGGGAAGTCAAGCCGTACATCT ATCGTAACGACAAGGGAGAAATCGACGGATTCTATCCGCAAATTTTCGCT AACGCCATGAAAATGTGTGGCCGTAATCGAACCTTATTTCAAATGTACAA CGCGACTAGAATGATCGATTTCGAAACTTTTGGTCAAACTTCGCGTCGTA GTTTCATGGAACTTTACAAAGCTGGACAATATCCACCGGGTTTGGTACCA GGACGTGATATCTACCTACCGGCGATTTATCAACGGGACGACTATATGAT caaagttgaagaaaaaaaactgttcATTAATTTTGATATTGATAAAGCAG AGAACTTAGCTGTAATTGTGCACCGTGATTACATTTCACTACCGTACAAA ATATTCCGAGGCATCATCAGTTGTGGACAGATTTTCTTCATGACTTTTCT AATGACTATATTTTTCGGTGTTCTTATCTGGTTATCGGAACGTGTTAATA ATCCGGCGTTTCCCGATTCCTGTTTTATCGGGACCGGGACAGGAGTTTGG TGGAGTTTTGTTTCTATGACAACAGTCGGTTACGGTGACGTTGTCCCGAA TTCTGTTTTCGGACGTTGTATCGCCGTCGTCTGGGTTTGTATCGGCGTCA TGATTGCGTGTATCGTGACGGCAACTGTCGCAGAAGTGGTGAACGGCGTT AGTGACTTATCCATTACAGGAAAGAAAATTGCCGTCTTGGAAAACTCAAC GGAAGCAGAACGAGTGTTTTCAGACTTTCGTGGTATCCCGTATCCTTGTC CAACGTACGAAGAAGTATACGCCGCTGTCCGACGTGGCGATGTTTACGCG GGTGCTGTCAACGCTGAAATAGCAGCGTGGAATATCGACGACATACAAAA CGACGACGTTAAGAACCCTTTACGTATCGTAATGTTGTTACCGACACGTT TAAACCTGAATATGGTGTTTTCACTGCACATACCGGACGAGTTCAAACCC ATCATACGGTGTATGCACGAATTCAAAACAGAAGTCTACGAACGTGCTAA AATCAAATACGGACGTTATTGCCCGACCGAAACTTTATATATTGAGTCGG TGGCTGATCTATTCAAATCTGTTTTCGTGCAGGGTTTACTTGGAGCTATA TTTGTTCTCTTTGTGATTGGGATAAGTTTGGATGTTTATTTGAAACGTAA GCTGACTAAATATCCGGGATCACGGCGTGATAGTGAGGTTGAAGAGATTG TACACACGCCGTTGAACGGGAACGGAGGCTCATTGACACTTcagattcaa aagaaaaatggtttTGTATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00021661-exon-sc0000391-1491911889:98244..102514 | TCONS_00021661-exon-sc0000391-1491911889:98244..102514 | Clytia hemisphaerica | exon |
| TCONS_00021661-exon-sc0000391-1510915933:98244..102514 | TCONS_00021661-exon-sc0000391-1510915933:98244..102514 | Clytia hemisphaerica | exon |
| TCONS_00021661-exon-sc0000391-1575043694:98244..102514 | TCONS_00021661-exon-sc0000391-1575043694:98244..102514 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000391 | supercontig | sc0000391:98244..102514 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
| GO:0006813 | potassium ion transport |
Vocabulary: Molecular Function
| Term | Definition |
| GO:0005249 | voltage-gated potassium channel activity |
Vocabulary: Cellular Component
| Term | Definition |
| GO:0008076 | voltage-gated potassium channel complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006813 |
potassium ion transport |
| cellular_component |
GO:0008076 |
voltage-gated potassium channel complex |
| molecular_function |
GO:0005249 |
voltage-gated potassium channel activity |
Blast
The following BLAST results are available for this feature:
|