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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021652 ID=TCONS_00021652|Name=TCONS_00021652|organism=Clytia hemisphaerica|type=transcript|length=712bp
ctgattttcgtgatcgtgactgaagacaaaaaattgtgtgatatcgtgat
cagagttaccgctaGGGGGAGGGGCCTCTTTAAAGGTAAacagaaaaatt
atatttctttataaTCCAACCATTTTAACAGTTCATTTCATAAGATTAAA
CACATAATTTCATTCAAGTAGAATTCAGTGAAAGTAAACCGTTGGTGGTG
TCGAATTATTAGCAAGCATGGTGAGGATCCATACCTTTGACGAAATATTA
TGTGCATTGGCATGGATTTTCAGTAACATTCATAACACAATTCGTTACTG
ATCTATCCACCAAGTGAAAAATTTCCAATTTAAACTTATAAGAAATCATA
AAGATGAATTATTTTCGGTAATGTCACTGAAATCGGAAGCACACTAATAC
CTCACATCGACATCAAATGTTGCCAAAACGTTTTCCAGCTTCTTCTACAC
TGTCGGTCCAAATTCTAGCCAGCCTTAtatccatttttcaaaaaaatata
atactttGATATCCATATTTTGAAAGCAAGTAGCGTTCTCTTTGTTATGC
TGTGTGAGAAATTGATCTACTTGAgccgaaaataaaaaaatgtggtgttt
ccggaatgcgggtgaaggaaaaaagctctcatgcggccggccggaaaaac
tttttttgttgctatttttgataacttaagatcattgaaatagaacttta
aagataactttt Run BLAST on NCBI transcript from alignment at sc0000391:173821..175015- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021652 ID=TCONS_00021652|Name=TCONS_00021652|organism=Clytia hemisphaerica|type=transcript|length=1195bp|location=Sequence derived from alignment at sc0000391:173821..175015- (Clytia hemisphaerica)
CTGATTTTCGTGATCGTGACTGAAGACAAAAAATTGTGTGATATCGTGAT
CAGAGTTACCGCTAGGGGGAGGGGCCTCTTTAAAGGTAAACAGAAAAATT
ATATTTCTTTATAATCCAACCATTTTAACAGTTCATTTCATAAGATTAAA
CACATAATTTCATTCAAGTAGAATTCAGTGAAAGTAAACCGTTGGTGGTG
TCGAATTATTAGCAAGCATGGTGAGGATCCATACCTTTGACGAAATATTA
TGTGCATTGGCATGGATTTTCAGTAACATTCATAACACAATTCGTTACTG
ATCTATCCACCAAGTGAAAAATTTCCAATTTAAACTTATAAGAAATCATA
AAGATGAATTATTTTCGGTAATGTCACTGAAATCGGAAGCACACTAATAC
CTCACATCGGCATCAAATGTTGCCAAAACGTTTTCGAGCTTCTTCTACAC
TGTCGGTCCAAATTTTAGCCAGCCGTATCCATTCTCAACAAATACTTTGN
AGTAAAAGGAAACCATTTGTGGTGTCGAAATATTAGCAAGCAACCAAACA
CAGCTTTAACCATTTTCTAAAATCCATCATAAATGTTGTATATGGCAATA
ACCAATTCTCCATTTGGCCTTATGCTTATGCCAACATCGAGCTCCTAAAA
TCAGAACCCTCGTAATTTTTCTTCTCAAAAAGGGAAATACATCCGGGCGA
GGATTCAAACCTTTGACGAAATACTACTTAGGTGCATTAGCATGGATTTT
AAGCGACATTCATCATAACACAATTCATTACCGATCTATCCACCAAGTGA
AAAATTTCCAATTTTAACTTATAAGAAATCATAAAGATGAATTATTTTCG
GTAATGCCACTGAAATCGGAAGCACACTAATACCTTACATCGACATCAAA
TGTTGCCAAAACGTTTTCCAGCTTCTTCTACACTGTCGGTCCAAATTCTA
GCCAGCCTTATATCCATTTTTCAAAAAAATATAATACTTTGATATCCATA
TTTTGAAAGCAAGTAGCGTTCTCTTTGTTATGCTGTGTGAGAAATTGATC
TACTTGAGCCGAAAATAAAAAAATGTGGTGTTTCCGGAATGCGGGTGAAG
GAAAAAAGCTCTCATGCGGCCGGCCGGAAAAACTTTTTTTGTTGCTATTT
TTGATAACTTAAGATCATTGAAATAGAACTTTAAAGATAACTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021652-exon-sc0000391-1575043694:174611..175015 | TCONS_00021652-exon-sc0000391-1575043694:174611..175015 | Clytia hemisphaerica | exon |
| TCONS_00021652-exon-sc0000391-1575043694:173821..174127 | TCONS_00021652-exon-sc0000391-1575043694:173821..174127 | Clytia hemisphaerica | exon |
| TCONS_00021652-exon-sc0000391-1510915933:174611..175015 | TCONS_00021652-exon-sc0000391-1510915933:174611..175015 | Clytia hemisphaerica | exon |
| TCONS_00021652-exon-sc0000391-1510915933:173821..174127 | TCONS_00021652-exon-sc0000391-1510915933:173821..174127 | Clytia hemisphaerica | exon |
| TCONS_00021652-exon-sc0000391-1491911889:174611..175015 | TCONS_00021652-exon-sc0000391-1491911889:174611..175015 | Clytia hemisphaerica | exon |
| TCONS_00021652-exon-sc0000391-1491911889:173821..174127 | TCONS_00021652-exon-sc0000391-1491911889:173821..174127 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391 | supercontig | sc0000391:173821..175015 - |
Blast
The following BLAST results are available for this feature:
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