TCONS_00021599 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021599
Unique NameTCONS_00021599
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1633

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021599 ID=TCONS_00021599|Name=TCONS_00021599|organism=Clytia hemisphaerica|type=transcript|length=1633bp
CCACGGCGTATTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGATTT
TATCCTGTCACCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGGAT
GAACGACGAGATGCTTGCCGGATTCACAGAACCATTGATCGATAAATATC
CCAATACCTACACATTTACTAAAGCACTCGCTGAGCACCTTATTAAGAAA
GAATCTGAAAATATACCATTTATGATTGTCCGCCCGTCCATTGTCAGTTC
CAGTATCTCTGATCCTTTTCCTGGCTGGGTAGATAATTACAACGGTGTCA
GTGGTATTGTTGTTGCTATTTCGCGAGGTCTCCTGCGTTCAATGCATGTC
CCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATGTGTCCAATTG
TATCATCACTTCAACGTGGTACTATGCTACTTCAAGAGACAAGCAACCAT
TGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACATCATTCTGTGAC
CTAGGAAATATGGTTAACGACTTTTACACCTATGACAATCCACTGAATTG
TATAATACGTCGTCCCAACTTCAAGGTTACAAACAGATATATGAATCAGT
ATTGGCAAGTGTTCAGTCACTATCTACCAGCTATCATCCTCGATGGATTG
TCCATCATCACTGGATCAAAACCAAGGTTTATGAACATCTACCGAACAAT
TGACACCTCTTTAACAACACTCGACTACTTCATTCAAAACCAGTGGAAGT
GGGGTAACCATAATCAACAAAAGATATTGAAAGCCATTCCCGAAGATGAA
GTCGAGGTATACGATTTTGATATGCGCAAGATAGTTTGGAAGACATATTA
TCAAGAAATGATGACAGGAATAAAATTGTATTTAGTGAAAGAAGATCAGT
CAGAACTCCCTAAAGCCCGAAGCACACATCGAAGATACAAAATGGTGCGA
TGGTTGTCTTCtacgattttcattttattggcTGGTCGATTCTTCTTCTT
GAAATCTGAAAGATTCCGTAAATTATGGTTCGAAGCTTTGTTCTCCATCT
ACAAATTTTTGCACCTTCTACGAATTCCAACTTTTCGAATTGTATGATAT
GTGAAATGAAGAAAGGGCATTTTCATTGGTCGTTCATTTTTCTTGGTCGT
TCATTGGTCATTCTGTgaatctattttattgaaatttgtttcaatttgGT
TTTTCAATCAGATCAACGCGGCTGTACTGAAATATGAGGAGTACATAATT
TACTCCTTCTTACCggtgttttgatagatttaaaaaaaactctCTTAGGT
GAATTTATTATAGTTGtaatttgttaaatttttcttcttaaCCCTTAATT
ATATACCTGGAAGTTTTAATAACTAAATTTTATGTGCTAAGCCACCTTTt
atgttgaaaattgaaaaatgtatatctatctatctatctacttttaaaaa
tttgatttatttttaattcgGTACGCACCAAAGTTAGTCCAATCAATATA
TTTATTTGTGCTTAATTGCCTTACGGGTTCTTTATTGAATATTAAGATGC
ATATAAGCAGAATGTCGTATTCTTGATTATGATTTTGCGGAAATTTTTGT
ATTCGTTATCATTTTTAggtatttattgaaaat
Run BLAST on NCBI

transcript from alignment at sc0000390:204679..212733-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021599 ID=TCONS_00021599|Name=TCONS_00021599|organism=Clytia hemisphaerica|type=transcript|length=8055bp|location=Sequence derived from alignment at sc0000390:204679..212733- (Clytia hemisphaerica)
CCACGGCGTATTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGATTT
TATCCTGTCACCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGAGT
ATACTGGGACCATTACAACACGCTGGAAAGTCCATCAGTAATTTTGTACA
TTTTTGTGATATAGTTTTAAACTGTCAAGCATGGATCTATCCATACTTAT
CTATCTATACTTTCTATAGAAAGTATTGGGTCATTTTTTATTAGGCTTTT
TTCAAGATGTGAAAGTGCCTAATATTCCTCTGAGACANGGGGCTTAGGCA
AGTGAAGGTATGGGTATGTGCCGTCCTTAAGGATGCCTTTTTGCGAACCT
GGCAGTCCCTGTAACGTTTCGAAAAATCTGAAAATTGAATCTCAGTCCCA
TCAAGGGTCATATAATAGGGAATTTTCAATTTTTTACGTCTAAAAACAAC
GAAAGAGTCGTAAAATTCGCAAAATCTTACAGTTTTCCATCATTTTAAGT
TCTGCTAAGGGACCGAGGGTCGACANAAGAAATTTTGGCGGATTTGGCCA
AAATCCGCCAAATTAAGTTCCCGCCAAAAGTTATATTATCCGTAGTCCGC
CAAATCAAATTCTCGCCAAATTTAATTTATATAACGTATCGCCAAATTTC
GTCCTATATTAGACTCCAAAATTTGGTTTTCAACGATTTTGCTATCATTT
TTTACCCTAAATATCTTGCAACCGCCAAACTTAATTTTCACGGCCATCCG
CCAAATTCAATTCCGTCTGAAAAAACTTTTTCAACCATCTGTCAATNGCG
GCAACCCCCGTCATCCTGTAAACCTAGGATTCCCTCGCCCTTCGGGTGTG
CCTGCACCTTTCAAGTTCGATCTCTAAAAAGTCTTACCTCTGCTTGGTTT
TGTTTGAAATGTTTTCACTTAAACGAGAGGCAATTTCTTCCAAAAAGCCG
AAAAAGTCATGTTATTGTTATTGTTATCTGTTGTTATTCTACGTTAGTTA
TTATATTATGACCTAAGAAAATCTCAAAGTTTTCTCTTTTCTAATACCAT
ACCAATTTCTTGAACTTTAAACTCAAGTAACTTCGCTTTTATTAGGGTTG
CAATGGAAATGAATGTGGTAGCCGTCAAAGAAATTCTTACTCTTGCAAAA
GCCCTGAAACATTTAGAGGTATCGGCATTCTTTTCTTTCGAACATACAAA
CTAACCTAAGTCATGCAGGAACATTTATGACAAAACATTCATCAAGCAGC
TTACTCTATGTTAAATTTTGACATAGATATTTTTAATCAAAATCAAGGCA
ATTTTTCTTGTTGTTGGTTTCTAGGTATTTTGTCACGTCTCCACGGCGTA
TTCACAATGTAATCAAGAGAAGGCTATTATGGAGAGATTTTATCCTGTCA
CCATCGAACCTGGCCGCATACTTGAAGCAATGGAGTGAGTATACTGGGAC
CATTACAACACGCTGGAAAGTCCATCAGTAATTTTGTACATTTTTGTGAT
ATAGTTTTAAACTGTCAAGCATGGATCTATCCATACTTATCTATCTATAC
TTTCTATAGAAAGTATTGGGTCATCTTTTATTAGGCTTTTTTCAGTATGA
TTTTCATGCAGGCTATGATACGACCGGACAATGGTTTTCAAGATGTGAAA
GTGCCTAATATTCCTCTGAGACATGGCATCACCTCAAACACTTTTCACGT
TGTCAAAAATCTGTGCTTCTCTTTCTTTCCGTCTGTCTATTTGTCTGTTA
TTCCGTCTGTAATACTTTAAAGGAAGAAATTTTGGCGGATTTGGCCAAAA
TCCGCCAAATTAAGTTCCCGCCAAAAGTTATATTATCCGTAGTCCGCCAA
ATCAAATTCTCGCCAAATTTAATTTATATAACGTATCGCCAAATTTCGTC
CTATATTAGACTCCAAAATTGGGTTTTCAACGATTTTGCTATCATTTTTT
ACCCTAAATATCTTGCAAACTTAATTTTCACGGCCATCCGCCAAATTCAA
TTCCGTCTGAAAAAACTTTTTCAACCATCTGCCAATGAAATTAAATTCCC
GCCAAAATCTCCTCATTTAATGTAATCGAACTTTGCAGGTGGATGAACGA
CGAGATGCTTGCCGGATTCACAGAACCATTGATCGATAAATATCCCAATA
CCTACACATTTACTAAAGCACTCGCTGAGCACCTTATTAAGAAAGAATCT
GAAAATATACCATTTATGATTGTCCGCCCGTCCATTGTCAGTTCCAGTAT
CTCTGATCCTTTTCCTGTAAGTTTTGACTTGACTGTATTTCTCGTCTATT
TTAGTTTTTCACTTTGAATTATTATTCTAACCTTACTATTATTTCAGTTT
CGTAAGATTATTAACATTCTACTTGAAAACTGTCAATGGTGTTGTTTATG
CACGTTGCAATTATCTTGTACCCACATTTTTTCACTTTCAGGGCTGGGTA
GATAATTACAACGGTGTCAGTGGTATTGTTGTTGCTGTAAGTTGTTCTTT
TTTCTCTCTATCACCAAAAAACAGGTCCCTAGGTTCACTTAACTAAAATT
AACTGAGATCAAGTAATAGTAATTTTAAAAGACTTTTAATAGGATATGTA
TTGTACTATACTTCTACTACTATCTTAGAGATTTTGGGATTTTATCGAAG
CAATCCTGAGAGGGGTTGTTCGAGGTTAAATAATTGATTTTTGGACCTAC
CCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTTTGTTCGTTCG
TTCGTTCGTTCGTTATTAGTTTTCGTCATGATTGGCTCATTATTTTTTTC
TGATTTTTTGCAGAATGTGACGGAGCCTGATTTTCGAAAAAAAAATTTTT
TGGGCAAATTTGGGCCAAAAAAAGGCTAAAAAACGGTTTTTTTTTGTGAA
AAATTGGATCATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCA
TCATAGGTAAAAGAAAGCTCAAGCAGATTTTTGCAAACAAATTTTGTAAG
CTCAAAAAACGCATGTTTATCTATAAGAATCTCTATTAATAAGCATACTT
CAATGTTTTTAGTCAAATTATTCAAATTTTTTATGAGATAGATGTTTTTT
TTGCTCACGAGGACTTACTTTTAAAGAATATGTGTGTTTAGACAAGAAAT
TTTGGTTGCTTGGCGTTTTTCTTTTTAGAAAAACTGCCCAAATTCGATAT
CTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACTGAATGATTGTTTAATGGTCACGCTC
ACGTAGATATCAATTGTATATGTGTTAAATGCATAACCAGGTATGTCCAT
AAAAGTATCACTTGTTTTCAAGCGATTTACTCATTTAAAAGGAGGTTTCC
CGAAAGCTGATGCCATAAGTTTTTATCGTATAACTATCCTGTGAGATGTT
TAATTGATGAATTCGTTTGAAGCAACTCAAAAACTCTTGCGAAATGATTG
TAAACAACCAGTATGAAGTAAAATACAAAATCAAAACAAATGTCACATGT
CAAAACATGAAATCAATTCAATATGACTGTTCTTCTTGTTGAGCAGATTG
TCAATTGTGCATGACACACGATGCTCGAACTTAAGTACTTTAACTGATAT
CCCACCTTTAAGCACCTAAATCCAAACAATTGCATCAACAATTGCAGGGA
AAATGAAAACCTGCAATCTAAAAAATACAAAATCCATAATCGAATTATCG
GGAACATCTAATTGAAGGCTAAATCACTCGGTAAAAACATGATACAATTT
CAAAAAAATCTACGAAATTCCATACCTCTAACATTATTTATGGAATCGTT
TATTTTGAAATACAAATACGTAATTCTATAAGAAGAGCCTGTAAAGAAAA
TCGAGGAAATTTAATAATGGTCGCCGGTGCTTATTAGAGGTCCTTATGAC
TAATTTTATTTTTGTTCCAGATTTCGCGAGGTCTCCTGCGTTCAATGCAT
GTCCCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATGTGTCCAA
TTGTATCATCACTTCAACGTGGTACTATGCTACTTCAAGGTTTGTCAATC
ACCAACCTTAAGAAATCTTTCATGTGACAAGAACAGTCCGACTGCTCCTT
TTTGATCACACCTTTCTAAAAACAAAGCTGAGTCTGAATAAAAGGTCAGA
AAGAATACCTCATTATTGCCCAAAAATAAAAACAGGGTAAGAACAATTTG
AGATTTAAAATGCCAAAAAAATGAACAGCTGAGCCTTTAAGAAAAAATTT
AGTGGTTCTCATTAAAAAGAATTTTTTTTTTTCTTCTCCAGAGACAAGCA
ACCATTGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACATCATTCT
GTGACCTAGGAAATATGGTTAACGACTTTTACACCTATGACAATCCACTG
AATTGTATAATACGTCGTCCCAACTTCAAGGTTACAAACAGGTAGATTTT
GTTTTCTTCTATATTCCTGGGTTAATTCTCAACTTCAGTTGAGCTATAAT
CTGAGAATGTCTGTATGTATGTCTGTCNACCTCTAACATTATTTATGGAA
TCGTTTATTTTGAAATACAAATACGTAATTCTATAAGAAGAGCCTGTAAA
GAAAATCGAGGAAATTTAATAATGGTCGCCGGTGCTTATTAGAGGTCCTT
ATGACTAATTTTATTTTTGTTCCAGATTTCGCGAGGTCTCCTGCGTTCAA
TGCATGTCCCGACGGTTATCAAACACGATATCGTTCCTGTAGACTATGTG
TCCAATTGTATCATCACTTCAACGTGGTACTATGCTACTTCAAGGTTTGT
CAATCACCAACCTTAAGAAATCTTTCATGTGACAAGAACAGTCCAACTGC
TCCTTTTTGATCACACCTTTCTAAAAACAAAGCTGAGTCTGAGTAAAAGG
TCAGAAAGAATACCTCATTATTGCCCAAAAATAAAAACAGGGTAAGAACA
ATTTGAGATTTAAAATGCCAAAAAAATGAACAGCTGAGCCTTTAAGAAAA
AATTTAGTGGTTCTCATTAAAAAGAATTTTTTTTTTCTTCACCAGAGACA
AGCAACCATTGATTTGCAACTGTACGTCAAGCGGTGTCAATCCTACATCA
TTCTGTGACCTAGGAAATATGGTTAACGACTTTTACACCTATGACAATCC
ACTGAATTGTATAATACGTCGTCCCAACTTCAAGGTTACAAACAGGTAGA
TTTTATTTTTTTCTATATTCCTGGGTTAATTTGTATTGTAATCGGACAAT
GTACTTCCAGTAGATTTGAAGTTGTTTCTAACGTTTGGACTGAACCTTTA
TCAACTTTTTTTTCAATTGCACAGATATATGAATCAGTATTGGCAAGTGT
TCAGTCACTATCTACCAGCTATCATCCTCGATGGATTGTCCATCATCACT
GGATCAAAACCAAGGTAACACATAACCTCTTACGAAAATGTCACAAGCTA
CACCTTGTCTTAACACCTTGATTGATATTGAAACAATTTTTGTACGTTTG
GAACCCTTTTTACTTTTTATGGTAACCTTTTTAAACTCTGTACACAATAT
TTGATGGATCATTCACTTATTTTCAGGTTTATGAACATCTACCGAACAAT
TGACACCTCTTTAACAACACTCGACTACTTCATTCAAAACCAGTGGAAGG
TATAGAACTTCTTCTTTAACTGAAACTTATCAAACGATTTCAGACTGTTG
AAATATATCACCTTTGCTAACGGACATAAAAATATTAAATCCTCGGGTTT
CGTAAAACAATTCTGCCTCAATTCGTACATGTACTAAGGCTTTTACGTGA
GATGCAGTTGTCATTATTACATAACTTATTTTTTTAGTGGGGTAACCATA
ATCAACAAAAGATATTGAAAGCCATTCCCGAAGATGAAGTCGAGGTAAGA
TGAAATTTTAGCCTGAAATGTTTCAAACAAAAATGAAATGAAGATGTTCT
CAAAGTCTGTTTTGATAATGTACAAAAAGCTTCGTATTTATGTTCTGACA
CGGCTTGTTGATTGATCATGGTAAATATAATGAAGATGATTGTTTTTCAA
TTTTATATACTGATACCTTTATACCTTACAGGCCTTGTCTTTTTTTGGTT
GTAGGTATACGATTTTGATATGCGCAAGATAGTTTGGAAGACATATTATC
AAGAAATGATGACAGGAATAAAATTGTATTTAGTGAAAGAAGATCAGTCA
GAACTCCCTAAAGCCCGAAGCACACATCGAAGGTTTTTGCCCTACTTTTC
AATTTCTTTTGATAACTGTTGCCAGGTTCATAGGTTGCTGGCATCCTCAT
ACTCCTTATAGATTATCAACCATTGGATTTGTGTAGACTATCAGATTTTC
TATGCTAAATAGATAGCTCCTATGAATTTTTCTAAGTAGCATTTTCTTGC
TTTTAGATACAAAATGGTGCGATGGTTGTCTTCTACGATTTTCATTTTAT
TGGCTGGTCGATTCTTCTTCTTGAAATCTGAAAGATTCCGTAAATTATGG
TTCGAAGCTTTGTTCTCCATCTACAAATTTTTGCACCTTCTACGAATTCC
AACTTTTCGAATTGTATGATATGTGAAATGAAGAAAGGGCATTTTCATTG
GTCGTTCATTTTTCTTGGTCGTTCATTGGTCATTCTGTGAATCTATTTTA
TTGAAATTTGTTTCAATTTGGTTTTTCAATCAGATCAACGCGGCTGTACT
GAAATATGAGGAGTACATAATTTACTCCTTCTTACCGGTGTTTTGATAGA
TTTAAAAAAAACTCTCTTAGGTGAATTTATTATAGTTGTAATTTGTTAAA
TTTTTCTTCTTAACCCTTAATTATATACCTGGAAGTTTTAATAACTAAAT
TTTATGTGCTAAGCCACCTTTTATGTTGAAAATTGAAAAATGTATATCTA
TCTATCTATCTACTTTTAAAAATTTGATTTATTTTTAATTCGGTACGCAC
CAAAGTTAGTCCAATCAATATATTTATTTGTGCTTAATTGCCTTACGGGT
TCTTTATTGAATATTAAGATGCATATAAGCAGAATGTCGTATTCTTGATT
ATGATTTTGCGGAAATTTTTGTATTCGTTATCATTTTTAGGTATTTATTG
AAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012113XLOC_012113Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021599-exon-sc0000390-1575043694:212640..212733TCONS_00021599-exon-sc0000390-1575043694:212640..212733Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:210468..210645TCONS_00021599-exon-sc0000390-1575043694:210468..210645Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:210248..210292TCONS_00021599-exon-sc0000390-1575043694:210248..210292Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:207745..207863TCONS_00021599-exon-sc0000390-1575043694:207745..207863Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:207343..207492TCONS_00021599-exon-sc0000390-1575043694:207343..207492Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:206370..206459TCONS_00021599-exon-sc0000390-1575043694:206370..206459Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:206135..206207TCONS_00021599-exon-sc0000390-1575043694:206135..206207Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:205890..205946TCONS_00021599-exon-sc0000390-1575043694:205890..205946Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:205552..205679TCONS_00021599-exon-sc0000390-1575043694:205552..205679Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1575043694:204679..205377TCONS_00021599-exon-sc0000390-1575043694:204679..205377Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:212640..212733TCONS_00021599-exon-sc0000390-1510915933:212640..212733Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:210468..210645TCONS_00021599-exon-sc0000390-1510915933:210468..210645Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:210248..210292TCONS_00021599-exon-sc0000390-1510915933:210248..210292Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:207745..207863TCONS_00021599-exon-sc0000390-1510915933:207745..207863Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:207343..207492TCONS_00021599-exon-sc0000390-1510915933:207343..207492Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:206370..206459TCONS_00021599-exon-sc0000390-1510915933:206370..206459Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:206135..206207TCONS_00021599-exon-sc0000390-1510915933:206135..206207Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:205890..205946TCONS_00021599-exon-sc0000390-1510915933:205890..205946Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:205552..205679TCONS_00021599-exon-sc0000390-1510915933:205552..205679Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1510915933:204679..205377TCONS_00021599-exon-sc0000390-1510915933:204679..205377Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:212640..212733TCONS_00021599-exon-sc0000390-1491911889:212640..212733Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:210468..210645TCONS_00021599-exon-sc0000390-1491911889:210468..210645Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:210248..210292TCONS_00021599-exon-sc0000390-1491911889:210248..210292Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:207745..207863TCONS_00021599-exon-sc0000390-1491911889:207745..207863Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:207343..207492TCONS_00021599-exon-sc0000390-1491911889:207343..207492Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:206370..206459TCONS_00021599-exon-sc0000390-1491911889:206370..206459Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:206135..206207TCONS_00021599-exon-sc0000390-1491911889:206135..206207Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:205890..205946TCONS_00021599-exon-sc0000390-1491911889:205890..205946Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:205552..205679TCONS_00021599-exon-sc0000390-1491911889:205552..205679Clytia hemisphaericaexon
TCONS_00021599-exon-sc0000390-1491911889:204679..205377TCONS_00021599-exon-sc0000390-1491911889:204679..205377Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000390supercontigsc0000390:204679..212733 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.6465	1.14228	1.00223	0.844712	0	0	0	0.0092769	1.06497	0.379763	7.69532e-07	0.155013	1.82595	0.463062	2.31259	1.45314	0	0.695232	0.00132843	1.76727	3.63953	1.69054	1.21004	0.454258	0	0	0.00665187	0.947488	6.27731	5.95869
Blast
[Close]
BLAST of TCONS_00021599 vs. Swiss-Prot (Human)
Match: FACR2 (Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.465e-79
Identity = 133/359 (37.05%), Postives = 212/359 (59.05%), Query Frame = 3 
Query:    3 TAYSQCNQEKAIMERFYPVTIEPGRILEAMEWMNDEMLAGFTEPLIDKYPNTYTFTKALAEHLIKKESENIPFMIVRPXXXXXXXXDPFPGWVDNYNGVSGIVVAISRGLLRSMHVPTVIKHDIVPVDYVSNCIITSTWYYATSRDKQPLICNCTSSGVNPTSFCDLGNMVNDFYTYDN-PLNCIIRRPNFKVT-NRYMNQYWQVFSHYLPAIILDGLSIITGSKPRFMNIYRTIDTSLTTLDYFIQNQWKWGNHNQQKILKAIPEDEVEVYDFDMRKIVWKTYYQEMMTGIKLYLVKEDQSELPKARSTHRRYKMVRWLSSTIFILLAGRFFFLKSERFRKLWFEALFSIYKFLHLLR 1073
            TAYS CN  K I E  YP  +EP +I++++EW++D ++   T  LI  +PN YT+TKAL E ++++ES N+   I+RPSIV ++  +PFPGWVDN NG +GI++A  +G LR++    +   D++PVD V N ++   WY A  R K  L+ + TS  +NP ++  +G  V    T++  P     RRPN   T N + +QYW   SH  PAII D    +TG KPR   +   +  +++ L+YFI   W+W  +N + ++  +  ++  V++FD+R++ W  Y +  + G+K YL+KED + +PKA+   +R + + +L +T   L+A R    +S+  R +WF  +   YKFL   R
Sbjct:  153 TAYSNCNL-KHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAVADVIPVDTVVNLMLAVGWYTAVHRPKSTLVYHITSGNMNPCNWHKMG--VQVLATFEKIPFERPFRRPNANFTSNSFTSQYWNAVSHRAPAIIYDCYLRLTGRKPRMTKLMNRLLRTVSMLEYFINRSWEWSTYNTEMLMSELSPEDQRVFNFDVRQLNWLEYIENYVLGVKKYLLKEDMAGIPKAKQRLKRLRNIHYLFNTALFLIAWRLLIARSQMARNVWFFIVSFCYKFLSYFR 508
The following BLAST results are available for this feature:
BLAST of TCONS_00021599 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FACR22.465e-7937.05Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2... [more]
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