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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021464 ID=TCONS_00021464|Name=TCONS_00021464|organism=Clytia hemisphaerica|type=transcript|length=1330bp
GGAAAATGTACATATCTTTGATATATAGTGTATAtgataaaataatcaaa
aattaaatgtAAAGGCAACAACATCGGGGTCtcagtaaaaattaaaaaac
tatgacaaataaagaaagaaaatcaaaactagatatattgtcaaaaaaat
tataaaatcaaaaaaatcgggaaaatttctttttacataaagcttaaaat
cttaaaaatattaaatattaattcgtcaaaataagaaataagaaatttca
aaataaaaataaactcaaatatatataaaaatatggaaagaaaattttga
tgactAAATTTAGACAATATGACAAATGAAAGTGAAGATAATTCTATAGT
CAAATTAAAAAAGGAGGTTTTAGATAACTGCGTCTTGCCTCTTGACAGTA
TTCGATAGAGGAATCTGTCCCTGGAAATACAATAACAATTTTCTACGACT
AATATGTATTTGAAAAACAATATAGTTTTTATCAGATCTGAGaatcactt
ttgaaaaaaagaaaaaaccttgCCGAACAGAAGAAAtgcactttaaaaaa
taatttttgtaaccATTTTAGTACCCACGACCTTTTATACTAAATTCCAT
GCTCTTCCCAGCCTGCGCTCTTCGAAAGCCAAAGAAAAATGACTTGTTGT
ATTAAAGTTTGGTCCCTATATTGGTCATTCTGCGTAACGGCTGGAAAAAT
TTTACCACAAAAAGTTAATAGTTTTACTCTGCGTTATGGCTTAACAAATT
TACCACAAACACTATCCTTCGTTCTGCGTGACGGCTGTAAGAAATTTACC
ACAAACAGTATGCTTTATTCTGCGTGATGGATGTAAGAAATTTACTACAA
ACATTATGCTTCATTATGCGTGATGGCTGTAAGAAATCTACCATAAACAT
TATGTTTCATTCTGTGTTTCTGTGTGATGAATGTAGTAAAATTACCACAG
ACATTATGCTTCATTCTGCGTGAttacttcttcatcttcttcacgTTGGT
CATGATGATATCTGGCAACACGAATCGCCTCTAATTTCTTACGAGCTTTT
TCCAAAGCTTTCTCTTGTTTCAAGATGGCTTCTTGTGCCATCAATTCGTC
CTTAAACATTTGATGTTTGGAATCATTGGCCACTTTGTACACAGATGGAT
TGTCAACCTCGTCATTGAAGAATGCAGATTCTTGAGCAGCTGTAACAAGA
CTGTCGGATGCGCGTTTGACAGCTGTTCCCGCATgctgaaaacaaaaatt
aagaGAATGTAGTAATTCCGGCAAACAGTATCCTGTACCACCCTACGCAC
CGgggattttttatattttgaacttATTTT Run BLAST on NCBI transcript from alignment at sc0000386:156382..157757- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021464 ID=TCONS_00021464|Name=TCONS_00021464|organism=Clytia hemisphaerica|type=transcript|length=1376bp|location=Sequence derived from alignment at sc0000386:156382..157757- (Clytia hemisphaerica)
GGAAAATGTACATATCTTTGATATATAGTGTATATGATAAAATAATCAAA
AATTAAATGTAAAGGCAACAACATCGGGGTCTCAGTAAAAATTAAAAAAC
TATGACAAATAAAGAAAGAAAATCAAAACTAGATATATTGTCAAAAAAAT
TATAAAATCAAAAAAATCGGGAAAATTTCTTTTTACATAAAGCTTAAAAT
CTTAAAAATATTAAATATTAATTCGTCAAAATAAGAAATAAGAAATTTCA
AAATAAAAATAAACTCAAATATATATAAAAATATGGAAAGAAAATTTTGA
TGACTAAATTTAGACAATATGACAAATGAAAGTGAAGATAATTCTATAGT
CAAATTAAAAAAGGAGGTTTTAGATAACTGCGTCTTGCCTCTTGACAGTA
TTCGATAGAGGAATCTGTCCCTGGAAATACAATAACAATTTTCTACGACT
AATATGTATTTGAAAAACAATATAGTTTTTATCAGATCTGAGAATCACTT
TTGAAAAAAAGAAAAAACCTTGCCGAACAGAAGAAATGCACTTTAAAAAA
TAATTTTTGTAACCATTTTAGTACCCACGACCTTTTATACTAAATTCCAT
GCTCTTCCCAGCCTGCGCTCTTCGAAAGCCAAAGAAAAATGACTTGTTGT
ATTAAAGTTTGGTCCCTATATTGGTCATTCTGCGTAACGGCTGGAAAAAT
TTTACCACAAAAAGTTAATAGTTTTACTCTGCGTTATGGCTTAACAAATT
TACCACAAACACTATCCTTCGTTCTGCGTGACGGCTGTAAGAAATTTACC
ACAAACAGTATGCTTTATTCTGCGTGATGGATGTAAGAAATTTACTACAA
ACATTACACTTCATTCTGTGTGATGGATGTAAGAAATTTACTACAAACAT
TATGCTTCATTATGCGTGATGGCTGTAAGAAATCTACCATAAACATTATG
TTTCATTCTGTGTTTCTGTGTGATGAATGTAGTAAAATTACCACAGACAT
TATGCTTCATTCTGCGTGATTACTTCTTCATCTTCTTCACGTTGGTCATG
ATGATATCTGGCAACACGAATCGCCTCTAATTTCTTACGAGCTTTTTCCA
AAGCTTTCTCTTGTTTCAAGATGGCTTCTTGTGCCATCAATTCGTCCTTA
AACATTTGATGTTTGGAATCATTGGCCACTTTGTACACAGATGGATTGTC
AACCTCGTCATTGAAGAATGCAGATTCTTGAGCAGCTGTAACAAGACTGT
CGGATGCGCGTTTGACAGCTGTTCCCGCATGCTGAAAACAAAAATTAAGA
GAATGTAGTAATTCCGGCAAACAGTATCCTGTACCACCCTACGCACCGGG
GATTTTTTATATTTTGAACTTATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021464-exon-sc0000386-1575043694:156906..157757 | TCONS_00021464-exon-sc0000386-1575043694:156906..157757 | Clytia hemisphaerica | exon |
| TCONS_00021464-exon-sc0000386-1575043694:156382..156859 | TCONS_00021464-exon-sc0000386-1575043694:156382..156859 | Clytia hemisphaerica | exon |
| TCONS_00021464-exon-sc0000386-1510915933:156906..157757 | TCONS_00021464-exon-sc0000386-1510915933:156906..157757 | Clytia hemisphaerica | exon |
| TCONS_00021464-exon-sc0000386-1510915933:156382..156859 | TCONS_00021464-exon-sc0000386-1510915933:156382..156859 | Clytia hemisphaerica | exon |
| TCONS_00021464-exon-sc0000386-1491911889:156906..157757 | TCONS_00021464-exon-sc0000386-1491911889:156906..157757 | Clytia hemisphaerica | exon |
| TCONS_00021464-exon-sc0000386-1491911889:156382..156859 | TCONS_00021464-exon-sc0000386-1491911889:156382..156859 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000386 | supercontig | sc0000386:156382..157757 - |
Blast
The following BLAST results are available for this feature:
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