TCONS_00021435 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021435
Unique NameTCONS_00021435
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1990

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021435 ID=TCONS_00021435|Name=TCONS_00021435|organism=Clytia hemisphaerica|type=transcript|length=1990bp
AGttgctctatctagtgttttatataagacaTAGTTAATGCCTTTCTTCC
ACCGATTACAAAGCTGTTTATTCCGGAAAATTTTGTACGTTTTTGTCTAC
ATGATTATGTTATTTCTTTCAGGTACCACTAGCAAGATGATGGAGTTCGT
CAGAAATGACGATGTCCAAAAGCAGTTCGAGATTGCGGCGAAAGGAGATT
CCGAGCCCTTCCTCAATTTTCAAAGTAAACGATCGGTGCAAAATAAGTTC
GCTGGAGTGGAAAATGAGGTGGAGGATTTTGAAATCCCGGTTTACTGGGA
GAAAATGAATACCCTCAAAAAAAGAGATCTTGTTCGTAACTTGGTCAGAT
GGTACACTGAGGCATGGCAGCCATGGATTCCTTCCTTGAAGCCAGAGTGG
TGGCCCAATGACATCCAATATCGATCGACAAGAAAATCTGATGTAGCGTC
GTTGGATAAGATATTGAAAAGCTTCTTCGAGTTCCGTGCTAAAAGCAGTA
TGgcCTCCTTCAAAGCTTCCGATCTTCCAACTGGGGAACAGTGGGCAGAC
TCAAAGTGGAATGAGGAATCACTTTGCCCTAAATACTGGCTCGAAAGGCA
TTGGTTTCCTCCAAAAACAACGTTTGACACGCGACTTGTATCTATAAAGT
ATCGCTGTTTGGTTGTTGGTACGGACTTGGAGCCATTTCATTTTGATACA
ACAGGAGAATGTATTTCTTTTGCCTTGTTTGCGACTCCTCAGTTTTCGCC
ATTTATGAAGTTGGCTACAATATTAGGCTGCTTATCGAACCTTGATGTTA
TGCTTGAGTGGaTCAAAAATGGTTTTGGTGATATGAAATATGAGGTCGTG
CAAACCTTATTTGGTGCAACAAACAAGAAGGAGCTGGAAGAACAAATAAT
CCAGAAAACAATAGATTCTACCACCAAAACAACAAACGTCTAAACTTTGG
TAAAACTTGCAAGAACCTCATAACTGATTAAACTGACCAACTGACACCTT
TGTAAACGTAATTACAAATAATGACAAATATTTTGCTCATAGTATAGAAC
GACCAGTATTGACATATAACGATGACAGATAAACAACTGCTCAGgtaTTT
TTGAGCTTGTTGGTGTATTTTTAGCCTTCGGAATATCTGTTTCCATTAGT
ACAGAAGCTGGTCTCTTTGTGTTCGGAGATACGGAGAGAAAGATTCATCT
CTTGTTTAATGACCAAACAACAGAATACTGTTGTTTGTTGAAAGGCGTAT
CATTTGATAAAACCTGCCGCCAACACAACCACTATTGTAATGCGGTATTG
ACGGCAACACAAACATTCCAGTGCCAAAGTTGTTTGCTGGAGTACCACAT
ATTCTGTGCCGCGGACGATCGTGATTGTGGGTGTTCATCAGAATCTCAAG
TAATACAAATGATCAAAGAACATATTCTTCAGGGTGATGATAAACATATA
GAATCAATGCTGCTCTTCAAACGAGATAGGCAATTAGAGAGCTATATCCT
CCAGATTCTGAAAGGAATTTATCCTGCCTGTCGTACCAAAATTGTCACGA
AACTTGTCAACGATCGGGATGCAgaagaaaatagattttttatgaaaact
atGTCATCTTCAAAACGCAAATTTGCTATCGATTGCATAAAGTCATCACT
CACCATTGATGCGAAAATGATTATCGAAAACCGTTTTTCTTCAGTATTGG
TGGATATGGTAATTGAAAGATGGTTGTTGCCAGAGGTTATCATGgaattg
ataaaaagaatgGTTAGAGGAAAATGCACGAATCTAATGCTTGAGCGCTC
ACTATTCCGATTGAGCAATGGCTTTGTATAGTTttgtatatataatatat
gatTTACTATAAAAAAATTAGGAGCGTAGAGATTAATTAAGAGATGATGG
TTTTGGCTCAGAGATCTTTCTTCttctgtatacttttttttcttttttgt
taatTGAGTATAAGGGAACTTTGTATATGAAATATCAGAA
Run BLAST on NCBI

protein sequence of TCONS_00021435-protein

>TCONS_00021435-protein ID=TCONS_00021435-protein|Name=TCONS_00021435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=301bp
MPFFHRLQSCLFRKILYVFVYMIMLFLSGTTSKMMEFVRNDDVQKQFEIA
AKGDSEPFLNFQSKRSVQNKFAGVENEVEDFEIPVYWEKMNTLKKRDLVR
NLVRWYTEAWQPWIPSLKPEWWPNDIQYRSTRKSDVASLDKILKSFFEFR
AKSSMASFKASDLPTGEQWADSKWNEESLCPKYWLERHWFPPKTTFDTRL
VSIKYRCLVVGTDLEPFHFDTTGECISFALFATPQFSPFMKLATILGCLS
NLDVMLEWIKNGFGDMKYEVVQTLFGATNKKELEEQIIQKTIDSTTKTTN
V
Run BLAST on NCBI

transcript from alignment at sc0000386:51411..59295+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021435 ID=TCONS_00021435|Name=TCONS_00021435|organism=Clytia hemisphaerica|type=transcript|length=7885bp|location=Sequence derived from alignment at sc0000386:51411..59295+ (Clytia hemisphaerica)
AGttgctctatctagtgttttatataagacaTAGTTAATGCCTTTCTTCC
ACCGATTACAAAGCTGTTTATTCCGGAAAATTTTGTACGTTTTTGTCTAC
ATGATTATGTTATTTCTTTCAGGTACCACTAGCAAGATGATGGAGTTCGT
CAGAAATGACGATGTCCAAAAGCAGTTCGAGATTGCGGCGAAAGGAGATT
CCGAGCCCTTCCTCAATTTTCAAAGTAATAGCCCCCGatctaaattttta
attttttgaacattgttgttttctttttaagttaTGTTGAATCAATtata
ttttctaagaaatgCCTTGCAATAATGTTGGATTCTTAAGTTTTTGAAGT
CTCTTGCATCGCATTACAAAGGTAGGTAAAATATTAAAGAATGAACCTCA
GTAATTTGAGGAATAAATTTCATGGACTAGCTTCTATGATAAGTTTTAAG
TTAGTAATTATTAAAATAAAGCACAGTTGAATTTCGATAAGTATACGCAT
GGGACCAAAGAAAAATGGTACTAATTGTAAGAATCTACCTTAAGTTAGTA
CTTATTATATGAGAATGTTCAAATTGTCCTACTTAACAGGATGCTTGaca
agaaaatttcaaaccatgAAATTAAGTGGGAAAAATCAGTCAATTAAGAC
TTTTGTCTAAGTTTTTAGAGACTCATATCTTCGAATTTTGAAACAGGCAA
TGTTGTTTCTCCAATCTATTACAGGATGTCCTACTTAAGCCCGTCCCGAG
TCTTACTTATTCCCAACTTTTTCTCTTCAAGGGAACGCAGAAAAGTGATA
ATACTTTTAGCCGCGTACTACTCGTCCGTAGTACTACTCGTCCGTAGTAC
TACTTATCCAATTTTTCNACAGATGGTAGGAAGCGCAGAGCTAAAGAAAA
GgtcaagttggagcagttggaAAACCTTGTATGTATTACGAACATTACGA
GCAACAGTTCCTTcctaaaaacatttgaaaaagaaatgatgAAAGCCTAA
ATCTATTCTAGCCtttgtgatatttttcaaagtaaaaaggaTAGACATAG
ATGGGATGTTTGTGTATTTTTTCTGCTTCCAACGATTAAGTGTTTTAATC
ATCATGTTGATTTTAGTCTGAAAGAACGTGGTCCAAATCTTTGTCTACTG
TATTATtcactgtttttcttttttttttaatcttcgcAACCTTTTTTTTT
AGATTAATCAAGTTTCAGNAAAAGTACTCGAATTTTATTGATTGTTCATC
CAAACTCCTCAATTAGGTAAACGATCGGTGCAAAATAAGTTCGCTGGAGT
GGAAAATGAGGTGGAGGATTTTGAAATCCCGGTTTACTGGGAGAAAATGA
ATACCCTCAAAAAAAGAGATCTTGTTCGTAACTTGGTCAGATGGTACACT
GGTAAATCATTTTCGaattcatttcaaattcaatcattaaatcTTTATCA
ATATCAATTATAACATTTCGGATACTAATGCATTGTTTCATCTTCAtgct
gaaatttttgtttacttgatCACGTTACTGAGTTTTCCTCTTCAGACTGC
TTTGCTGATTGCAAGGATGAATAGTGAAATGCTAATTTTGATATCTGTTG
TTTTATTTCCAGAGGCATGGCAGCCATGGATTCCTTCCTTGAAGCCAGAG
TGGTGGCCCAATGACATCCAATATCGATCGACAAGAAAATCTGATGTAGC
GTCGTTGGATAAGATATTGAAAAGCTTCTTCGAGTTCCGTGCTAAAAGCA
GTATGGTTAGTCTATTAATTCATTTATTATAGACCTACTGGAGTTTCCTA
TACATAAATGAAAAACTCTAATCTTTTCGTCTGTTACCAAACTACTAGGT
TTAAAACAGCAATGCCCCGAAAAAAATGTTTGGATAGAAAAATCACTCGA
ACTTTTTTCCATGCAATAGGACTTATTTTGTTATTAATTCTTTAGCAGAA
AGATCTATCAGAATTAATTTCCCATTATAGGCTTCTTTCAAATCCTCGAG
TTTCGTGCTACCAGCAATATGTTGGTATAAAACATTTTGActgcaaaatt
tcaaggaaCAAAGTggcatttgaaaaaatatgtatCGACCTTTTTGTGTT
GGCATACTGCCACGGAGAGGTTGTAAATCTAAGTTTAAAGTAGCTCAAGC
ATCGCTATACTAGGCGGTttaagaatgaaaatttttaagtgAGACTCTGT
CCTTAtgttaaatatattttgatattttaggcCTCCTTCAAAGCTTCCGA
TCTTCCAACTGGGGAACAGTGGGCAGACTCAAAGTGGAATGAGGAATCAC
TTTGCCCTAAATACTGGCTCGAAAGGCATTGGTTTCCTCCAAAAACAACG
TTTGACACGCGACTTGTATCTATAAAGTATATAAAATCAGTTCCTGAGAT
TTTTTGCgcattcttcttttcttttttattttctttttctttttcttttt
taaaatacTAAATACTACcccaaaacttttcaaaggtATGGAAAGCCGTT
GCctctccatctatctttgtTATATTTAACTCaataccgggtgtgccaga
aATATGTTACCCTCTTTAATTTGATATTGCAGGCAGTAGTTcaaagattt
ctcaaaaatagtctcgagataattcagagaaaatcctaacttaaaatttt
gtgTATCAccttttaattttacttcattaaagttcaaaagttatgtcccC
GAGTTATGTCAAAAGATCTAAAAcgtcatttttaaaaaatatcaaaaaag
gcTGAAAACAAGATTATCAATTCATAAAAGAAAGGACTTCTTCAACCAta
acattaaaatacaaagttttggTGCTTATTTATTCATCTTGATTGTGACT
TCCCTTTCCCTTATTAATGATCTCCGTTGGGCATCAACAGGAGGaggatt
cttcaatcttcacaaaaaattaacatcttTCCAAGAGTTTCCAAAGCTTT
TTCTGTGTGTACATCATCTTTCTGAAACATAGAGAAGGTTTGAGAAAAAT
GATTCATTAGAAATGCTGCACATCTGCAATCTCGGACCACAGatgataaa
aaatgtatttacaGAGACGCTTACCGCGTAAATCAGTACTTTTTACATAG
TGgaaatacatttattttatcTCTATTCATTACAATTAATTTAAagtcaa
agagggtaacttatttctggCACACCCGGTAGTCCGAGGGAAAATGAAAT
GTGATTCGTATTATAGAGAGAAAAGTACTTATACAATGAATTAAACTTTT
ATTGTTTAGGTATCGCTGTTTGGTTGTTGGTACGGACTTGGAGCCATTTC
ATTTTGATACAACAGGAGAATGTATTTCTTTTGCCTTGTTTGCGACTCCT
CAGTTTTCGCCATTTATGAAGTTGGCTACAATATTAGGCTGCTTATCGAA
CCTTGATGTTATGCTTGAGTGGGTTAgtacatttttttcttgatcattaa
gtaaattttatttaaaaaacttagCAATCCCTTAGCATTAATATGCACTA
ATATGCACTAATTGAGGCGGCAACCTGGTGGATTCTATTTTTTTCATGCT
TGAAACGGCGAAATTCTAAGTTCGCTCGGATAAAATAGGATGCCTGCTGG
GATATGGAATAAAGGTCGAGGGTTTCTTTTGCGATTTTTCCCCCTTACCC
AAGGTTAGATGAAACATAAGCTTTGTTTAACAGAACTGCAAAAGATGTAC
AGACTTCGGAACTTGTTGTATTCAATTCCTAGAGAGAGAATATGTTTTGG
TTTATTTTCGTCTTGTCAagagatattttctttttaatcgatagaTCAAA
AATGGTTTTGGTGATATGAAATATGAGGTCGTGCAAACCTTATTTGGTGC
AACAAACAAGAAGGAGCTGGAAGAACAAATAATCCAGAAAACAATAGATT
CTAGTAAGAAATTTTCATCGTTCAACAAAAATCCATGTAAACTCGAAACT
CGACTCTCctagaaagaaaataaacttttcaaaTGTTCTCAGCATGTATT
TATATGCTATATCAAAAATactatacaccgttggaaaggtaTTTTCAAGG
AGAATAATCAAATTGATTaaagacttttgaaaatttggaaaatgaagatg
aaaaagaaaatgtagtttttccaggtttttcTTCTGCTTCAAAAATAGTG
ACACCAGGCGTTTTGGAATATTTGAACCTTGCTGTTGTGTTCAGATTTTG
CGTATCTCTCTCAGATAATGAGTTGCATTACGTGGTGAATTAGgtcattt
ttgctgtttttggtcatttttagcCGTTTTAGGTCTACTTCAAAAAATGA
CTAACTTTTTATGCAACAAAGCTGAACAAAGATAGGAAAAGCAAGGTTCA
AATATTGCAAGAGTCTGATgctatgatttttttaattttgatttcactgc
atttgattgttttttacctgAGGACAAAAGGGTTTTTATCACATtgagat
ttcgatagaaattttcatcctcaCTGCAAGAAGAAGTTCTACCGGGGCta
tgagacagggatgtctaTTGTGTTATGAAATATTTTGACTACTTTTGAAG
ACTACAGAATTTTCATGGATGGACTTTTCTTGTTGAACCCGGTAAATAAC
GACTAGTATTGACATATAACGATGACAGATAAACAACTGTACAGGTTTGT
TACAGACTTCATGTAGACGACAATTAATAagacatttttttacatatttt
tctgTTCATGCAAGCCACCAAAACAACAAACGTCTAAACTTTGGTAAAAC
TTGCAAGAACCTCATAACTGATTAAACTGACCAACTGACACCTTTGTAAA
CGTAATTACAAATAATGACAAATATTTTGCTCATAGTATAGAACGACCAG
TATTGACATATAACGATGACAGATAAACAACTGCTCAGGTTTGTTACAGA
CTTCATGTAGACGACAATTAATGcgacattttttatttctctatGATTTA
ACATCACTTAGTTATGGCTCAAATTGAACTTCAGACATATTTGCTAAAAT
ATATGATAAAATATAAAGTATGATGAATTATAAACCTAGAAAatgcaaaa
gaaaaatttcttttttcaggtaTTTTTGAGCTTGTTGGTGTATTTTTAGC
CTTCGGAATATCTGTTTCCATTAGTACAGAAGCTGGTCTCTTTGTGTTCG
GAGATACGGAGAGAAAGATTCATCTCTTGTTTAATGACCAAACAACAGAA
TACTGTTGTTTGTTGAAAGGCGTATCATTTGATAAAACCTGCCGCCAACA
CAACCACTATTGTAATGCGGTATTGACGGCAACACAAACATTCCAGTGCC
AAAGTTGTTTGCTGGAGTACCACATATTCTGTGCCGCGGACGATCGTGAT
TGTGGGTGTTCATCAGAATCTCAAGTAATACAAATGTAAGTGattgatag
accttttcataaattacgtcacgaacatcacttacctcgtATCCAAATaa
tttccatggtgatcatatcccttgagacattaaatggttttttatgaata
gaaagtagttgtaataaaatccgctgggagttaatagctatggcaataat
ttcaaaacgaggcatatgatgttcgtgacgtaatttatgaaaaggtctat
tttatcCTTTTATATAGGTAGAACAAAAACATTTAACACTCGTGATAGTT
GGACCAAACTATTTGGTATAGTAGAGTCCTCTCTTTTCTTTATGTGGTCA
GAATCTTAGCATGCTATAATTATCTGTGTTGggagaaaaaagtttttaag
aaattttcttACCTGTCGATGTCACTGGTTCTATCCatgattttgaatta
aaattaaatttttgtaaattgtaCCTGGTCCTCGGGGGTGGTTGGCCACA
AAGTGACCCATTACATTTCTATGAACCAATGAAAAATGAGTTGAAATAAA
GAAAGAACTGCTTCGGGAGATTGACCTTTACTAGCAACAACAATCTCTTG
CCAATTACATTTCAGGATCAAAGAACATATTCTTCAGGGTGATGATAAAC
ATATAGAATCAATGCTGCTCTTCAAACGAGATAGGCAATTAGAGGTAACT
TCATTCAGTGATAATTTTTTGATTCATGCAAACCTTTCTTAACAAAACAG
TCTTAAGAAAAAAGACAACGTATAATTGATCTAATAACATCATGCGAACG
ATCGAAAATAATATTTGGTTTGGTCGAAATATTTTTAGTGCAATATGGTT
AATTTAATTTCTCCTTTTCAAATATATTATTGACATAACTATATTGCAGA
AAAGAATGCTCCACGTTCAAACAGCTTATGAATTTCAAGAATTATGACTA
AAATTTGTACCTAAACTCATACTTAGTTTCGAACAACTTTGATTATAACT
ATCTTTTGGACGATGGTGGATAAGGAATTTGTATATGATTCGTTCTTGAA
GTCTAATATGTTTACTTCTACTATATAAACTTTATAATTGCTTCTATTTA
GAGCTATATCCTCCAGATTCTGAAAGGAATTTATCCTGCCTGTCGTACCA
AAATTGTCACGAAACTTGTCAACGATCGGGATGCAgaagaaaatagattt
tttatgaaaactatGTCATCTTCAAAAGTAAGTTCTGTTGTCTAACATTT
TACGGCATGAAGACTGTTCAGCTCTACCTAGCGTAAAAAGTTCTCTGAAA
TCTTTCGCTTTGTCATTTTCTAAAAGGAATTTTTAACATGAGCTTGTTTA
ATGTATTAATGAAGTctctttcaaagaattttagcattccttactttttt
taaaccaaagaaattcacgttatttttttaaatttctacgAGCGATGGCC
GAgtcctagaacacccccttctcacagacccactgggaccccttcccact
ggaaaatcctcactgcaaaatattgtgctattttttccatccccactgta
TTTTTTTGGCTCGAACACAATAGATTTCAAATCCCCGTGCCATACAAAAG
ATCGGATAATCAATCCTCATCGAGTTTtggttatttttacccccactggc
tgataaaatcctaccgggtctgcgagaaggggaTGTCTTAGATAGCCAAG
TCAGCTGGCTGTGATTCCCTCAAAAACAATCGAGAGAAtgcctaaaagtc
ctagattacttgGCTTTCCATGTAAAATATTGACTCTTTCAatcgaatat
aattattttaacACAGTTTTGTGTCCATTTcgtgaaataaaaaatctagt
TCTAAACgagaacaaaaaataatatctttGACCTTTTTAGCGCAAATTTG
CTATCGATTGCATAAAGTCATCACTCACCATTGATGCGAAAATGATTATC
GAAAACCGTTTTTCTTCAGTATTGGTGGATATGGTAATTGAAAGATGGTT
GTTGCCAGAGGTTAGTGTAAAGTTATTTAAGTCTGCTTGAAGCCATTACA
TTTAATTGAATTGGATAAATATTTGCTTTTTTAGTCcgagtattaaaaaa
aaacatggatGTCTAAAGCGAGAACAATATAAGAACAATGCTAAGCCTAG
AATTTGACACAAATTTAATGGTCAACGTACAGTCAACTCTGCCTGATTCT
CTCTAATACCTCTCGCTATTCGAATTTTCTGTAATTCTCGCATACTTTGG
GAAACAATTTTCATGTTCTTCTATTTTAAGGTTATCATGgaattgataaa
aagaatgGTTAGAGGAAAATGCACGAATCTAATGCTTGAGCGCTCACTAT
TCCGATTGAGCAATGGCTTTGTATAGTTttgtatatataatatatgatTT
ACTATAAAAAAATTAGGAGCGTAGAGATTAATTAAGAGATGATGGTTTTG
GCTCAGAGATCTTTCTTCttctgtatacttttttttcttttttgttaatT
GAGTATAAGGGAACTTTGTATATGAAATATCAGAA

Coding sequence (CDS) from alignment at sc0000386:51411..59295+

>TCONS_00021435 ID=TCONS_00021435|Name=TCONS_00021435|organism=Clytia hemisphaerica|type=CDS|length=6342bp|location=Sequence derived from alignment at sc0000386:51411..59295+ (Clytia hemisphaerica)
ATGCCTTTCTTCCACCGATTACAAAGCTGTTTATTCCGGAAAATTTTGTA
CGTTTTTGTCTACATGATTATGTTATTTCTTTCAGGTACCACTAGCAAGA
TGATGGAGTTCGTCAGAAATGACGATGTCCAAAAGCAGTTCGAGATTGCG
GCGAAAGGAGATTCCGAGCCCTTCCTCAATTTTCAAAGTAAACGATCGGT
GCAAAATAAGTTCGCTGGAGTGGAAAATGAGGTGGAGGATTTTGAAATCC
CGGTTTACTGGGAGAAAATGAATACCCTCAAAAAAAGAGATCTTGTTCGT
AACTTGGTCAGATGGTACACTGAGGCATGGCAGCCATGGATTCCTTCCTT
GAAGCCAGAGTGGTGGCCCAATGACATCCAATATCGATCGACAAGAAAAT
CTGATGTAGCGTCGTTGGATAAGATATTGAAAAGCTTCTTCGAGTTCCGT
GCTAAAAGCAGTATGgcCTCCTTCAAAGCTTCCGATCTTCCAACTGGGGA
ACAGTGGGCAGACTCAAAGTGGAATGAGGAATCACTTTGCCCTAAATACT
GGCTCGAAAGGCATTGGTTTCCTCCAAAAACAACGTTTGACACGCGACTT
GTATCTATAAAGTATCGCTGTTTGGTTGTTGGTACGGACTTGGAGCCATT
TCATTTTGATACAACAGGAGAATGTATTTCTTTTGCCTTGTTTGCGACTC
CTCAGTTTTCGCCATTTATGAAGTTGGCTACAATATTAGGCTGCTTATCG
AACCTTGATGTTATGCTTGAGTGGaTCAAAAATGGTTTTGGTGATATGAA
ATATGAGGTCGTGCAAACCTTATTTGGTGCAACAAACAAGAAGGAGCTGG
AAGAACAAATAATCCAGAAAACAATAGATTCTACCACCAAAACAACAAAC
GTCTAAATGCCTTTCTTCCACCGATTACAAAGCTGTTTATTCCGGAAAAT
TTTGTACGTTTTTGTCTACATGATTATGTTATTTCTTTCAGGTACCACTA
GCAAGATGATGGAGTTCGTCAGAAATGACGATGTCCAAAAGCAGTTCGAG
ATTGCGGCGAAAGGAGATTCCGAGCCCTTCCTCAATTTTCAAAGTAAACG
ATCGGTGCAAAATAAGTTCGCTGGAGTGGAAAATGAGGTGGAGGATTTTG
AAATCCCGGTTTACTGGGAGAAAATGAATACCCTCAAAAAAAGAGATCTT
GTTCGTAACTTGGTCAGATGGTACACTGAGGCATGGCAGCCATGGATTCC
TTCCTTGAAGCCAGAGTGGTGGCCCAATGACATCCAATATCGATCGACAA
GAAAATCTGATGTAGCGTCGTTGGATAAGATATTGAAAAGCTTCTTCGAG
TTCCGTGCTAAAAGCAGTATGgcCTCCTTCAAAGCTTCCGATCTTCCAAC
TGGGGAACAGTGGGCAGACTCAAAGTGGAATGAGGAATCACTTTGCCCTA
AATACTGGCTCGAAAGGCATTGGTTTCCTCCAAAAACAACGTTTGACACG
CGACTTGTATCTATAAAGTATCGCTGTTTGGTTGTTGGTACGGACTTGGA
GCCATTTCATTTTGATACAACAGGAGAATGTATTTCTTTTGCCTTGTTTG
CGACTCCTCAGTTTTCGCCATTTATGAAGTTGGCTACAATATTAGGCTGC
TTATCGAACCTTGATGTTATGCTTGAGTGGaTCAAAAATGGTTTTGGTGA
TATGAAATATGAGGTCGTGCAAACCTTATTTGGTGCAACAAACAAGAAGG
AGCTGGAAGAACAAATAATCCAGAAAACAATAGATTCTACCACCAAAACA
ACAAACGTCTAAATGCCTTTCTTCCACCGATTACAAAGCTGTTTATTCCG
GAAAATTTTGTACGTTTTTGTCTACATGATTATGTTATTTCTTTCAGGTA
CCACTAGCAAGATGATGGAGTTCGTCAGAAATGACGATGTCCAAAAGCAG
TTCGAGATTGCGGCGAAAGGAGATTCCGAGCCCTTCCTCAATTTTCAAAG
TAAACGATCGGTGCAAAATAAGTTCGCTGGAGTGGAAAATGAGGTGGAGG
ATTTTGAAATCCCGGTTTACTGGGAGAAAATGAATACCCTCAAAAAAAGA
GATCTTGTTCGTAACTTGGTCAGATGGTACACTGAGGCATGGCAGCCATG
GATTCCTTCCTTGAAGCCAGAGTGGTGGCCCAATGACATCCAATATCGAT
CGACAAGAAAATCTGATGTAGCGTCGTTGGATAAGATATTGAAAAGCTTC
TTCGAGTTCCGTGCTAAAAGCAGTATGgcCTCCTTCAAAGCTTCCGATCT
TCCAACTGGGGAACAGTGGGCAGACTCAAAGTGGAATGAGGAATCACTTT
GCCCTAAATACTGGCTCGAAAGGCATTGGTTTCCTCCAAAAACAACGTTT
GACACGCGACTTGTATCTATAAAGTATCGCTGTTTGGTTGTTGGTACGGA
CTTGGAGCCATTTCATTTTGATACAACAGGAGAATGTATTTCTTTTGCCT
TGTTTGCGACTCCTCAGTTTTCGCCATTTATGAAGTTGGCTACAATATTA
GGCTGCTTATCGAACCTTGATGTTATGCTTGAGTGGaTCAAAAATGGTTT
TGGTGATATGAAATATGAGGTCGTGCAAACCTTATTTGGTGCAACAAACA
AGAAGGAGCTGGAAGAACAAATAATCCAGAAAACAATAGATTCTACCACC
AAAACAACAAACGTCTAAATGCCTTTCTTCCACCGATTACAAAGCTGTTT
ATTCCGGAAAATTTTGTACGTTTTTGTCTACATGATTATGTTATTTCTTT
CAGGTACCACTAGCAAGATGATGGAGTTCGTCAGAAATGACGATGTCCAA
AAGCAGTTCGAGATTGCGGCGAAAGGAGATTCCGAGCCCTTCCTCAATTT
TCAAAGTAAACGATCGGTGCAAAATAAGTTCGCTGGAGTGGAAAATGAGG
TGGAGGATTTTGAAATCCCGGTTTACTGGGAGAAAATGAATACCCTCAAA
AAAAGAGATCTTGTTCGTAACTTGGTCAGATGGTACACTGAGGCATGGCA
GCCATGGATTCCTTCCTTGAAGCCAGAGTGGTGGCCCAATGACATCCAAT
ATCGATCGACAAGAAAATCTGATGTAGCGTCGTTGGATAAGATATTGAAA
AGCTTCTTCGAGTTCCGTGCTAAAAGCAGTATGgcCTCCTTCAAAGCTTC
CGATCTTCCAACTGGGGAACAGTGGGCAGACTCAAAGTGGAATGAGGAAT
CACTTTGCCCTAAATACTGGCTCGAAAGGCATTGGTTTCCTCCAAAAACA
ACGTTTGACACGCGACTTGTATCTATAAAGTATCGCTGTTTGGTTGTTGG
TACGGACTTGGAGCCATTTCATTTTGATACAACAGGAGAATGTATTTCTT
TTGCCTTGTTTGCGACTCCTCAGTTTTCGCCATTTATGAAGTTGGCTACA
ATATTAGGCTGCTTATCGAACCTTGATGTTATGCTTGAGTGGaTCAAAAA
TGGTTTTGGTGATATGAAATATGAGGTCGTGCAAACCTTATTTGGTGCAA
CAAACAAGAAGGAGCTGGAAGAACAAATAATCCAGAAAACAATAGATTCT
ACCACCAAAACAACAAACGTCTAAATGCCTTTCTTCCACCGATTACAAAG
CTGTTTATTCCGGAAAATTTTGTACGTTTTTGTCTACATGATTATGTTAT
TTCTTTCAGGTACCACTAGCAAGATGATGGAGTTCGTCAGAAATGACGAT
GTCCAAAAGCAGTTCGAGATTGCGGCGAAAGGAGATTCCGAGCCCTTCCT
CAATTTTCAAAGTAAACGATCGGTGCAAAATAAGTTCGCTGGAGTGGAAA
ATGAGGTGGAGGATTTTGAAATCCCGGTTTACTGGGAGAAAATGAATACC
CTCAAAAAAAGAGATCTTGTTCGTAACTTGGTCAGATGGTACACTGAGGC
ATGGCAGCCATGGATTCCTTCCTTGAAGCCAGAGTGGTGGCCCAATGACA
TCCAATATCGATCGACAAGAAAATCTGATGTAGCGTCGTTGGATAAGATA
TTGAAAAGCTTCTTCGAGTTCCGTGCTAAAAGCAGTATGgcCTCCTTCAA
AGCTTCCGATCTTCCAACTGGGGAACAGTGGGCAGACTCAAAGTGGAATG
AGGAATCACTTTGCCCTAAATACTGGCTCGAAAGGCATTGGTTTCCTCCA
AAAACAACGTTTGACACGCGACTTGTATCTATAAAGTATCGCTGTTTGGT
TGTTGGTACGGACTTGGAGCCATTTCATTTTGATACAACAGGAGAATGTA
TTTCTTTTGCCTTGTTTGCGACTCCTCAGTTTTCGCCATTTATGAAGTTG
GCTACAATATTAGGCTGCTTATCGAACCTTGATGTTATGCTTGAGTGGaT
CAAAAATGGTTTTGGTGATATGAAATATGAGGTCGTGCAAACCTTATTTG
GTGCAACAAACAAGAAGGAGCTGGAAGAACAAATAATCCAGAAAACAATA
GATTCTACCACCAAAACAACAAACGTCTAAATGCCTTTCTTCCACCGATT
ACAAAGCTGTTTATTCCGGAAAATTTTGTACGTTTTTGTCTACATGATTA
TGTTATTTCTTTCAGGTACCACTAGCAAGATGATGGAGTTCGTCAGAAAT
GACGATGTCCAAAAGCAGTTCGAGATTGCGGCGAAAGGAGATTCCGAGCC
CTTCCTCAATTTTCAAAGTAAACGATCGGTGCAAAATAAGTTCGCTGGAG
TGGAAAATGAGGTGGAGGATTTTGAAATCCCGGTTTACTGGGAGAAAATG
AATACCCTCAAAAAAAGAGATCTTGTTCGTAACTTGGTCAGATGGTACAC
TGAGGCATGGCAGCCATGGATTCCTTCCTTGAAGCCAGAGTGGTGGCCCA
ATGACATCCAATATCGATCGACAAGAAAATCTGATGTAGCGTCGTTGGAT
AAGATATTGAAAAGCTTCTTCGAGTTCCGTGCTAAAAGCAGTATGgcCTC
CTTCAAAGCTTCCGATCTTCCAACTGGGGAACAGTGGGCAGACTCAAAGT
GGAATGAGGAATCACTTTGCCCTAAATACTGGCTCGAAAGGCATTGGTTT
CCTCCAAAAACAACGTTTGACACGCGACTTGTATCTATAAAGTATCGCTG
TTTGGTTGTTGGTACGGACTTGGAGCCATTTCATTTTGATACAACAGGAG
AATGTATTTCTTTTGCCTTGTTTGCGACTCCTCAGTTTTCGCCATTTATG
AAGTTGGCTACAATATTAGGCTGCTTATCGAACCTTGATGTTATGCTTGA
GTGGaTCAAAAATGGTTTTGGTGATATGAAATATGAGGTCGTGCAAACCT
TATTTGGTGCAACAAACAAGAAGGAGCTGGAAGAACAAATAATCCAGAAA
ACAATAGATTCTACCACCAAAACAACAAACGTCTAAATGCCTTTCTTCCA
CCGATTACAAAGCTGTTTATTCCGGAAAATTTTGTACGTTTTTGTCTACA
TGATTATGTTATTTCTTTCAGGTACCACTAGCAAGATGATGGAGTTCGTC
AGAAATGACGATGTCCAAAAGCAGTTCGAGATTGCGGCGAAAGGAGATTC
CGAGCCCTTCCTCAATTTTCAAAGTAAACGATCGGTGCAAAATAAGTTCG
CTGGAGTGGAAAATGAGGTGGAGGATTTTGAAATCCCGGTTTACTGGGAG
AAAATGAATACCCTCAAAAAAAGAGATCTTGTTCGTAACTTGGTCAGATG
GTACACTGAGGCATGGCAGCCATGGATTCCTTCCTTGAAGCCAGAGTGGT
GGCCCAATGACATCCAATATCGATCGACAAGAAAATCTGATGTAGCGTCG
TTGGATAAGATATTGAAAAGCTTCTTCGAGTTCCGTGCTAAAAGCAGTAT
GgcCTCCTTCAAAGCTTCCGATCTTCCAACTGGGGAACAGTGGGCAGACT
CAAAGTGGAATGAGGAATCACTTTGCCCTAAATACTGGCTCGAAAGGCAT
TGGTTTCCTCCAAAAACAACGTTTGACACGCGACTTGTATCTATAAAGTA
TCGCTGTTTGGTTGTTGGTACGGACTTGGAGCCATTTCATTTTGATACAA
CAGGAGAATGTATTTCTTTTGCCTTGTTTGCGACTCCTCAGTTTTCGCCA
TTTATGAAGTTGGCTACAATATTAGGCTGCTTATCGAACCTTGATGTTAT
GCTTGAGTGGaTCAAAAATGGTTTTGGTGATATGAAATATGAGGTCGTGC
AAACCTTATTTGGTGCAACAAACAAGAAGGAGCTGGAAGAACAAATAATC
CAGAAAACAATAGATTCTACCACCAAAACAACAAACGTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012019XLOC_012019Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021435-proteinTCONS_00021435-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021435-exon-sc0000386-1491911889:51411..51634TCONS_00021435-exon-sc0000386-1491911889:51411..51634Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:51411..51634TCONS_00021435-exon-sc0000386-1510915933:51411..51634Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:51411..51634TCONS_00021435-exon-sc0000386-1575043694:51411..51634Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:52677..52811TCONS_00021435-exon-sc0000386-1491911889:52677..52811Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:52677..52811TCONS_00021435-exon-sc0000386-1510915933:52677..52811Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:52677..52811TCONS_00021435-exon-sc0000386-1575043694:52677..52811Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:53023..53165TCONS_00021435-exon-sc0000386-1491911889:53023..53165Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:53023..53165TCONS_00021435-exon-sc0000386-1510915933:53023..53165Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:53023..53165TCONS_00021435-exon-sc0000386-1575043694:53023..53165Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:53641..53786TCONS_00021435-exon-sc0000386-1491911889:53641..53786Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:53641..53786TCONS_00021435-exon-sc0000386-1510915933:53641..53786Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:53641..53786TCONS_00021435-exon-sc0000386-1575043694:53641..53786Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:54670..54832TCONS_00021435-exon-sc0000386-1491911889:54670..54832Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:54670..54832TCONS_00021435-exon-sc0000386-1510915933:54670..54832Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:54670..54832TCONS_00021435-exon-sc0000386-1575043694:54670..54832Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:55205..55313TCONS_00021435-exon-sc0000386-1491911889:55205..55313Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:55205..55313TCONS_00021435-exon-sc0000386-1510915933:55205..55313Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:55205..55313TCONS_00021435-exon-sc0000386-1575043694:55205..55313Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:56125..56298TCONS_00021435-exon-sc0000386-1491911889:56125..56298Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:56125..56298TCONS_00021435-exon-sc0000386-1510915933:56125..56298Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:56125..56298TCONS_00021435-exon-sc0000386-1575043694:56125..56298Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:56480..56795TCONS_00021435-exon-sc0000386-1491911889:56480..56795Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:56480..56795TCONS_00021435-exon-sc0000386-1510915933:56480..56795Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:56480..56795TCONS_00021435-exon-sc0000386-1575043694:56480..56795Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:57376..57454TCONS_00021435-exon-sc0000386-1491911889:57376..57454Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:57376..57454TCONS_00021435-exon-sc0000386-1510915933:57376..57454Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:57376..57454TCONS_00021435-exon-sc0000386-1575043694:57376..57454Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:57862..57987TCONS_00021435-exon-sc0000386-1491911889:57862..57987Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:57862..57987TCONS_00021435-exon-sc0000386-1510915933:57862..57987Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:57862..57987TCONS_00021435-exon-sc0000386-1575043694:57862..57987Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:58651..58770TCONS_00021435-exon-sc0000386-1491911889:58651..58770Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:58651..58770TCONS_00021435-exon-sc0000386-1510915933:58651..58770Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:58651..58770TCONS_00021435-exon-sc0000386-1575043694:58651..58770Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1491911889:59041..59295TCONS_00021435-exon-sc0000386-1491911889:59041..59295Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1510915933:59041..59295TCONS_00021435-exon-sc0000386-1510915933:59041..59295Clytia hemisphaericaexon
TCONS_00021435-exon-sc0000386-1575043694:59041..59295TCONS_00021435-exon-sc0000386-1575043694:59041..59295Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000386supercontigsc0000386:51411..59295 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.505317	0.960485	0.183287	0	1.10808	0.601514	0.649903	0.368562	0.166024	0.534529	0	0.95349	0.395922	0.249106	1.13954	0.933597	0.297116	2.66902	0	0.577511	0	0.121809	0.622126	1.03639	0	0.513461	0.0686387	0	0.140702	0.727309
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021435 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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