TCONS_00021336 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021336
Unique NameTCONS_00021336
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2639

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021336 ID=TCONS_00021336|Name=TCONS_00021336|organism=Clytia hemisphaerica|type=transcript|length=2639bp
aaaaatattttgcagtcgCCTGGCACCGAATTCTGAAATGGCAGTTCATG
CATTGAGTGTacaaaaaagatattttgacaCAATAAAAGATGGGACAAAA
AAGGTTGAAGGTCGTGTTGGTAAAGTTGACACATCAAAAGGAATCAATGA
GAATTACAAAGAATCACAATCTGTTTATAAACAAGATGATGAGATCAAAT
TTGTAATATCTGGTGAAGAAGAAACATCAGAGATTTTGATGTGTAAGATT
ttgaaagttgaattttttgatACCATTGAAGACATGTTGAAATTATGTGG
ACTATCGAACTGTTTACCTGGTATAACCTCTTACGAAGAAGGAGTTCAAA
TTTATCATGGATTTCCAAATTATGCAGAACGTGAAAAACTTTATGGAGCT
ATTGGAATTTATGTTCAAGTGTTGAAAACAGTATAGGATTTTTTTTGGTT
ATAATCTTTAAGTTTATTACAGTATAACATGCATTCCACATTAAAAACAA
TACAGTTCAGTTCTTATCTCTGGTTTTCTTTCtcagaatttttttattgt
atttatcTATTCAAAgcacttttttttaaaccaatcaagAGAATaataga
agaaaagaaaaatgaaaagagcTGCTTCAACATCAATTGATGACGAAGAT
GAGAGATATTATTGCACACCATCAACTCTCACTGAACAACACTTCAAGAT
TCTAAAATCACTCTTCCAAAATGCAAACACAAATATGAGTTCATTGATAG
AAATTTACCGTAAATTGAGTGAAAAATTGGATGAAAGTGACTTTCCGAAA
TTGTACAAAGTACATGGTATAGTTCAACCTATATATAAATGGTTAGATTT
GCTCTATTTGAGAGAATTTAAGCACCAATGGGCGGGCAATCCAGATCCTG
AGAAAATCAACTTCAAGTTTTTATTCAAGAGGACAGATAAAGagatttta
ccattagaaagtcACAAACAATACATTTATGAAGCACACAGAGGTATAAA
GACATTCAAAGGAATGTACAGCCGTGACAAACATCGTAATTATAGGCATA
ATGATGCTAAAACTACAAAGAAACTGTTAAGGACGAAATTTACTGTTGGA
AAGTATGAGTTTGGTATACCAGAGGACTCTATAATGAACGAGGTGTCGCT
GTGTGAACAGTGCAAGATATTCCAACGTGATAAGATACCTGTCATCAAGA
AGCCTTGGATACCTCGTAAACATGTTGAACCGCCCCCAAAATCAACAAAT
GGTTCTGCAGATAATGGTGCAGTGTTGAGATACCCGATCACTCAAGCATG
GGAATGGTCTAATGAAGAAAGTATCTGGTACAATAGATCTGGTTTGAAAG
CAGAGAATGATCGTCTTGCAAAGATTAGAAACATCATACAGGAAATTGGC
GTTGACTTGCCTGCTACACTTACTGGCAACCCTTCTGCTCAAAAACGTGT
TTTGACAAAAATAGTTTGTGCAAAGATGATGATTAACGATAAAACGGAAC
AACTGCAACCAGAACAATacaatatgaatgttcaaactctCTGCGAAGGA
ATGGACACCTTTTTTGAAGAATCATTGAAACATTGCANAATGGTTCTGCA
GATAATGGTGCAGTGTTGAGATACCCGATCACTCAAGCATGGGAATGGTC
TAATGAAGAAAGTATCTGGTACAATAGATCTGGTGGGAATTCTATGATTT
TTAATTAAACTGTTTTCACCACTTTTTCTCTTTACAGCAAGAAGATAGAA
AAGAGTCAGGTTGTGAAGTTGATATGTCATTTcgtaatcagatggtttga
gattcTTGGCTTGTGAAGTCATTTCATGGTCCTGAGTAAAACCTCCAATT
TTTTGGTCCAAGTGTTTTCCAAGGTTTGAAAGCAGAGAATGATCGTCTTG
CAAAGATTAGAAACATCATACAGGAAATTGGCGTTGACTTGCCTGCTACA
CTTACTGGCAACCCTTCTGCTCAAAAACGTGTTTTGACAAAAATAGTTTG
TGCAAAGATGATGATTAACGATAAAATGGAACAACTGCAACCAGAACAAT
acaatatgaatgttcaaactctCTGCGAAGGAATGGACACCTTTTTTGAA
GAATCATTGAAACATTGCAATTATAAGACGTTCATGTACGATATCAACAG
TCTACTTTTCAATAAAGTCTCTCTCACCGATGATAGACAcaAACTTTGGG
ATAATCTATGGGAGCAATTCGAATCGAGGTTGCAAGACATTTTGAAGTTG
GATCAAACAATACCTCGAAAACAAATCGATGGGTTCACTATTGACTTTGA
TAAACctgtacaattaacaaaacaagaTCTTGATGGATTTGAAATAGGCG
TAAAAGATCATGAAAAAGAGGCTGGAAACTCATCACTCGTgtcttcaaat
taaagaaaGTAGATTGAAAAGTGCTTTGATTGTTGCCATCATTTCATTGT
ACTATTATGATAGAGTTACAGGAGCCAATAGGATGTTTGTTATTGTGTAc
agtattttcagttttttagtatCTTTTTTATAGGAATTATTTTGTAGAAG
TCACATGTTTTCCTTTTTATTATCGATTTGTTCATTTACATCACAAGTTA
TATATGTATACTTAAATACAAAATCAACACAAGTCAACT
Run BLAST on NCBI

protein sequence of TCONS_00021336-protein

>TCONS_00021336-protein ID=TCONS_00021336-protein|Name=TCONS_00021336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MKRAASTSIDDEDERYYCTPSTLTEQHFKILKSLFQNANTNMSSLIEIYR
KLSEKLDESDFPKLYKVHGIVQPIYKWLDLLYLREFKHQWAGNPDPEKIN
FKFLFKRTDKEILPLESHKQYIYEAHRGIKTFKGMYSRDKHRNYRHNDAK
TTKKLLRTKFTVGKYEFGIPEDSIMNEVSLCEQCKIFQRDKIPVIKKPWI
PRKHVEPPPKSTNGSADNGAVLRYPITQAWEWSNEESIWYNRSGLKAEND
RLAKIRNIIQEIGVDLPATLTGNPSAQKRVLTKIVCAKMMINDKTEQLQP
EQYNMNVQTLCEGMDTFFEESLKHCXMVLQIMVQC
Run BLAST on NCBI

transcript from alignment at sc0000385:196218..200588+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021336 ID=TCONS_00021336|Name=TCONS_00021336|organism=Clytia hemisphaerica|type=transcript|length=4371bp|location=Sequence derived from alignment at sc0000385:196218..200588+ (Clytia hemisphaerica)
aaaaatattttgcagtcgCCTGGgtgagtttttttttcgtcggccgcatt
tccggaaacaagactactttttttggcctgattttctttttgaaatacaT
GAAATCACTTACATGGTTACCTTTCGTATATATGTTTGTTAATATCGATC
TATTCAGAAAGTTGTTTAATTCAAAAGGTTCCTTCTACATAGCCAGCTTT
CTCTGCTGTTATTATATTATTAGCACCGAATTCTGAAATGGCAGTTCATG
CATTGAGTGTacaaaaaagatattttgacaCAATAAAAGATGGGACAAAA
AAGGTTGAAGGTCGTGTTGGTAAAGTTGACACATCAAAAGGAATCAATGA
GAATTACAAAGAATCACAATCTGTTTATAAACAAGATGATGAGATCAAAT
TTGTAATATCTGGTGAAGAAGAAACATCAGAGATTTTGATGTGTAAGATT
ttgaaagttgaattttttgatACCATTGAAGACATGTTGAAATTATGTGG
ACTATCGAACTGTTTACCTGGTATAACCTCTTACGAAGAAGGAGTTCAAA
TTTATCATGGATTTCCAAATTATGCAGAACGTGAAAAACTTTATGGAGCT
ATTGGAATTTATGTTCAAGTGTTGAAAACAGTATAGGATTTTTTTTGGTT
ATAATCTTTAAGTTTATTACAGTATAACATGCATTCCACATTAAAAACAA
TACAGTTCAGTTCTTATCTCTGGTTTTCTTTCtcagaatttttttattgt
atttatcTATTCAAAgcacttttttttaaaccaatcaagAGAATaataga
agaaaagaaaaatgaaaagagcTGCTTCAACATCAATTGATGACGAAGAT
GAGAGATATTATTGCACACCATCAACTCTCACTGAACAACACTTCAAGAT
TCTAAAATCACTCTTCCAAAATGCAAACACAAATATGAGTTCATTGATAG
AAATTTACCGTAAATTGAGTGAAAAATTGGATGAAAGTGACTTTCCGAAA
TTGTACAAAGTACATGGTATAGTTCAACCTATATATAAATGGTTAGATTT
GCTCTATTTGAGAGAATTTAAGCACCAATGGGCGGGCAATCCAGATCCTG
AGAAAATCAACTTCAAGTTTTTATTCAAGAGGACAGATAAAGagatttta
ccattagaaagtcACAAACAATACATTTATGAAGCACACAGAGGTATAAA
GACATTCAAAGGAATGTACAGCCGTGACAAACATCGTAATTATAGGCATA
ATGATGCTAAAACTACAAAGAAACTGgtgagattttaatttttttaagtt
tctcTGGACAAATCACTTAATTTCTCAACGCCATTATTTGTAGCAAATGG
GGTTTATGAGCTTCTATGAAAAAGCAGCACATAGCCTGTTGTAATAGATA
CGAGAGAGAGAAATTTGCTCAATGCCCAAGGCCATTGAAAATGCAAAATA
ATAAATTTATAGGTAGTTTATAATTGGGTTTTTATTAGTCTTCTGTTTCT
CTCCATTCAGTTAAGGACGAAATTTACTGTTGGAAAGTATGAGTTTGGTA
TACCAGAGGACTCTATAATGAACGAGGTGTCGCTGTGTGAACAGTGCAAG
ATATTCCAACGTGATAAGATACCTGTCATCAAGAAGCCTTGGATACCTCG
TAAACATGTTGAACCGCCCCCAAAATCAACAAATGGTTCTGCAGATAATG
GTGCAGTGTTGAGATACCCGATCACTCAAGCATGGGAATGGTCTAATGAA
GAAAGTATCTGGTACAATAGATCTGGTGGGAATTCTATGATTTTTAATTA
AACTGTTTTCACCACTTTTTCTCTTTACAGCAAGAAGATAGAAAAGAGTC
AGGTTGTGAAGTTGATATGTCATTTcgtaatcagatggtttgagattcTT
GGCTTGTGAAGTCATTTCATGGTCCTGAGTAAAACCTCCAATTTTTTGGT
CCAAGTGTTTTCCAAGGTTGAAATACAATATAAAACGGTGCTTACCATAT
GttaggattttttttaataCTTGCAAAAGTGCATAACTTGTAACTTGAAT
ATCTGGACTTCGAAGAGATTTTAGTAAAACGATTTGGATTtgggtttttt
tttctcatttcattaaaataaatttacagccCAAAGATTTCATGTTCATA
CATACATACTGTTTCGTGTTTTATAGGTTTGAAAGCAGAGAATGATCGTC
TTGCAAAGATTAGAAACATCATACAGGAAATTGGCGTTGACTTGCCTGCT
ACACTTACTGGCAACCCTTCTGCTCAAAAACGTGTTTTGACAAGTAAGAA
ATTACAATCAATGtgagaattatgttttgaaATAATGTTAAAAACTGAAT
AATTGGAATACTTTGACTACTAAGATCGGAAATAGATTTCTTACGGCTTA
ATAATCCGGAAAGAATAACCAAGATATTTTTTAAACCTGCATATTCAACC
TTCTCTGCAAGTCTTGCTTTCATAATCCTAGAAATAGTTTGTGCAAAGAT
GATGATTAACGATAAAACGGAACAACTGCAACCAGAACAATacaatatga
atgttcaaactctCTGCGAAGGAATGGACACCTTTTTTGAAGAATCATTG
AAACATTGCANAATGGTTCTGCAGATAATGGTGCAGTGTTGAGATACCCG
ATCACTCAAGCATGGGAATGGTCTAATGAAGAAAGTATCTGGTACAATAG
ATCTGGTGGGAATTCTATGATTTTTAATTAAACTGTTTTCACCACTTTTT
CTCTTTACAGCAAGAAGATAGAAAAGAGTCAGGTTGTGAAGTTGATATGT
CATTTcgtaatcagatggtttgagattcTTGGCTTGTGAAGTCATTTCAT
GGTCCTGAGTAAAACCTCCAATTTTTTGGTCCAAGTGTTTTCCAAGGTTG
AAATACAATATAAAACGGTGCTTACCATATGttaggattttttttaataC
TTGCAAAAGTGCATAACTTGTAACTTGAATATCTGGACTTCGAAGAGATT
TTAGTAAAACGATTTGGATTtgggtttttttttctcatttcattaaaata
aatttacagccCAAAGATTTCATGTTCATACATACATACTGTTTCGTGTT
TTATAGGTTTGAAAGCAGAGAATGATCGTCTTGCAAAGATTAGAAACATC
ATACAGGAAATTGGCGTTGACTTGCCTGCTACACTTACTGGCAACCCTTC
TGCTCAAAAACGTGTTTTGACAAGTAAGAAATTACAATCAATGtgagaat
tatgttttgaaATAATGTTAAAAACTGAATAATTGGAATACTTTGACTAC
TAAGATCGGAAATAGATTTCTTACGGCTTAATGATCCGGAAAGAATAAAC
AAGATATTTTTTAAACCTACATATTCAACCTTCTCTGCAAGTCTTGCTTT
CATAATCCTAGAAATAGTTTGTGCAAAGATGATGATTAACGATAAAATGG
AACAACTGCAACCAGAACAATacaatatgaatgttcaaactctCTGCGAA
GGAATGGACACCTTTTTTGAAGAATCATTGAAACATTGCAATTATAAGAC
GTTCATGTACGATATCAACAGTCTACTTTTCAATAAAGTCTCTCTCACCG
ATGATAGACAGTAAGTTAATCTCGTTCAATTTTTTATAGGAAATAAAAGC
GACTTTCGTTAAAAATAAAAGGATATCGAAAATCGAACGCTCTTGATAGT
ATCCTTTATTTACTAGTTTAGGAGCATCTTAGAACATCCAGGAACATCTA
GTGTTTGTTTGTGAGCAATTATGAATGTTGAATTGAGTTGATTATTAACC
TTGGTACTCAAATTGTCGTTAGAAACGTTCCCAAATGTTCTGGTGAAGTT
ATTGCAATGgggcatatcatgaataatgattTCTCTGTTGAGCCTGAACT
CTtggatttctttattttcagcaAACTTTGGGATAATCTATGGGAGCAAT
TCGAATCGAGGTTGCAAGACATTTTGAAGTTGGATCAAACAATACCTCGA
AAACAAATCGATGGGTTCACTATTGACTTTGATAAACctgtacaattaac
aaaacaagaTCTTGATGGATTTGAAATAGGCGTAAAAGATCATGAAAAAG
AGGCTGGAAACTCATCACTCGTgtcttcaaattaaagaaaGTAGATTGAA
AAGTGCTTTGATTGTTGCCATCATTTCATTGTACTATTATGATAGAGTTA
CAGGAGCCAATAGGATGTTTGTTATTGTGTAcagtattttcagtttttta
gtatCTTTTTTATAGGAATTATTTTGTAGAAGTCACATGTTTTCCTTTTT
ATTATCGATTTGTTCATTTACATCACAAGTTATATATGTATACTTAAATA
CAAAATCAACACAAGTCAACT

Coding sequence (CDS) from alignment at sc0000385:196218..200588+

>TCONS_00021336 ID=TCONS_00021336|Name=TCONS_00021336|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at sc0000385:196218..200588+ (Clytia hemisphaerica)
atgaaaagagcTGCTTCAACATCAATTGATGACGAAGATGAGAGATATTA
TTGCACACCATCAACTCTCACTGAACAACACTTCAAGATTCTAAAATCAC
TCTTCCAAAATGCAAACACAAATATGAGTTCATTGATAGAAATTTACCGT
AAATTGAGTGAAAAATTGGATGAAAGTGACTTTCCGAAATTGTACAAAGT
ACATGGTATAGTTCAACCTATATATAAATGGTTAGATTTGCTCTATTTGA
GAGAATTTAAGCACCAATGGGCGGGCAATCCAGATCCTGAGAAAATCAAC
TTCAAGTTTTTATTCAAGAGGACAGATAAAGagattttaccattagaaag
tcACAAACAATACATTTATGAAGCACACAGAGGTATAAAGACATTCAAAG
GAATGTACAGCCGTGACAAACATCGTAATTATAGGCATAATGATGCTAAA
ACTACAAAGAAACTGTTAAGGACGAAATTTACTGTTGGAAAGTATGAGTT
TGGTATACCAGAGGACTCTATAATGAACGAGGTGTCGCTGTGTGAACAGT
GCAAGATATTCCAACGTGATAAGATACCTGTCATCAAGAAGCCTTGGATA
CCTCGTAAACATGTTGAACCGCCCCCAAAATCAACAAATGGTTCTGCAGA
TAATGGTGCAGTGTTGAGATACCCGATCACTCAAGCATGGGAATGGTCTA
ATGAAGAAAGTATCTGGTACAATAGATCTGGTTTGAAAGCAGAGAATGAT
CGTCTTGCAAAGATTAGAAACATCATACAGGAAATTGGCGTTGACTTGCC
TGCTACACTTACTGGCAACCCTTCTGCTCAAAAACGTGTTTTGACAAAAA
TAGTTTGTGCAAAGATGATGATTAACGATAAAACGGAACAACTGCAACCA
GAACAATacaatatgaatgttcaaactctCTGCGAAGGAATGGACACCTT
TTTTGAAGAATCATTGAAACATTGCANAATGGTTCTGCAGATAATGGTGC
AGTGTTGAatgaaaagagcTGCTTCAACATCAATTGATGACGAAGATGAG
AGATATTATTGCACACCATCAACTCTCACTGAACAACACTTCAAGATTCT
AAAATCACTCTTCCAAAATGCAAACACAAATATGAGTTCATTGATAGAAA
TTTACCGTAAATTGAGTGAAAAATTGGATGAAAGTGACTTTCCGAAATTG
TACAAAGTACATGGTATAGTTCAACCTATATATAAATGGTTAGATTTGCT
CTATTTGAGAGAATTTAAGCACCAATGGGCGGGCAATCCAGATCCTGAGA
AAATCAACTTCAAGTTTTTATTCAAGAGGACAGATAAAGagattttacca
ttagaaagtcACAAACAATACATTTATGAAGCACACAGAGGTATAAAGAC
ATTCAAAGGAATGTACAGCCGTGACAAACATCGTAATTATAGGCATAATG
ATGCTAAAACTACAAAGAAACTGTTAAGGACGAAATTTACTGTTGGAAAG
TATGAGTTTGGTATACCAGAGGACTCTATAATGAACGAGGTGTCGCTGTG
TGAACAGTGCAAGATATTCCAACGTGATAAGATACCTGTCATCAAGAAGC
CTTGGATACCTCGTAAACATGTTGAACCGCCCCCAAAATCAACAAATGGT
TCTGCAGATAATGGTGCAGTGTTGAGATACCCGATCACTCAAGCATGGGA
ATGGTCTAATGAAGAAAGTATCTGGTACAATAGATCTGGTTTGAAAGCAG
AGAATGATCGTCTTGCAAAGATTAGAAACATCATACAGGAAATTGGCGTT
GACTTGCCTGCTACACTTACTGGCAACCCTTCTGCTCAAAAACGTGTTTT
GACAAAAATAGTTTGTGCAAAGATGATGATTAACGATAAAACGGAACAAC
TGCAACCAGAACAATacaatatgaatgttcaaactctCTGCGAAGGAATG
GACACCTTTTTTGAAGAATCATTGAAACATTGCANAATGGTTCTGCAGAT
AATGGTGCAGTGTTGAatgaaaagagcTGCTTCAACATCAATTGATGACG
AAGATGAGAGATATTATTGCACACCATCAACTCTCACTGAACAACACTTC
AAGATTCTAAAATCACTCTTCCAAAATGCAAACACAAATATGAGTTCATT
GATAGAAATTTACCGTAAATTGAGTGAAAAATTGGATGAAAGTGACTTTC
CGAAATTGTACAAAGTACATGGTATAGTTCAACCTATATATAAATGGTTA
GATTTGCTCTATTTGAGAGAATTTAAGCACCAATGGGCGGGCAATCCAGA
TCCTGAGAAAATCAACTTCAAGTTTTTATTCAAGAGGACAGATAAAGaga
ttttaccattagaaagtcACAAACAATACATTTATGAAGCACACAGAGGT
ATAAAGACATTCAAAGGAATGTACAGCCGTGACAAACATCGTAATTATAG
GCATAATGATGCTAAAACTACAAAGAAACTGTTAAGGACGAAATTTACTG
TTGGAAAGTATGAGTTTGGTATACCAGAGGACTCTATAATGAACGAGGTG
TCGCTGTGTGAACAGTGCAAGATATTCCAACGTGATAAGATACCTGTCAT
CAAGAAGCCTTGGATACCTCGTAAACATGTTGAACCGCCCCCAAAATCAA
CAAATGGTTCTGCAGATAATGGTGCAGTGTTGAGATACCCGATCACTCAA
GCATGGGAATGGTCTAATGAAGAAAGTATCTGGTACAATAGATCTGGTTT
GAAAGCAGAGAATGATCGTCTTGCAAAGATTAGAAACATCATACAGGAAA
TTGGCGTTGACTTGCCTGCTACACTTACTGGCAACCCTTCTGCTCAAAAA
CGTGTTTTGACAAAAATAGTTTGTGCAAAGATGATGATTAACGATAAAAC
GGAACAACTGCAACCAGAACAATacaatatgaatgttcaaactctCTGCG
AAGGAATGGACACCTTTTTTGAAGAATCATTGAAACATTGCANAATGGTT
CTGCAGATAATGGTGCAGTGTTGAatgaaaagagcTGCTTCAACATCAAT
TGATGACGAAGATGAGAGATATTATTGCACACCATCAACTCTCACTGAAC
AACACTTCAAGATTCTAAAATCACTCTTCCAAAATGCAAACACAAATATG
AGTTCATTGATAGAAATTTACCGTAAATTGAGTGAAAAATTGGATGAAAG
TGACTTTCCGAAATTGTACAAAGTACATGGTATAGTTCAACCTATATATA
AATGGTTAGATTTGCTCTATTTGAGAGAATTTAAGCACCAATGGGCGGGC
AATCCAGATCCTGAGAAAATCAACTTCAAGTTTTTATTCAAGAGGACAGA
TAAAGagattttaccattagaaagtcACAAACAATACATTTATGAAGCAC
ACAGAGGTATAAAGACATTCAAAGGAATGTACAGCCGTGACAAACATCGT
AATTATAGGCATAATGATGCTAAAACTACAAAGAAACTGTTAAGGACGAA
ATTTACTGTTGGAAAGTATGAGTTTGGTATACCAGAGGACTCTATAATGA
ACGAGGTGTCGCTGTGTGAACAGTGCAAGATATTCCAACGTGATAAGATA
CCTGTCATCAAGAAGCCTTGGATACCTCGTAAACATGTTGAACCGCCCCC
AAAATCAACAAATGGTTCTGCAGATAATGGTGCAGTGTTGAGATACCCGA
TCACTCAAGCATGGGAATGGTCTAATGAAGAAAGTATCTGGTACAATAGA
TCTGGTTTGAAAGCAGAGAATGATCGTCTTGCAAAGATTAGAAACATCAT
ACAGGAAATTGGCGTTGACTTGCCTGCTACACTTACTGGCAACCCTTCTG
CTCAAAAACGTGTTTTGACAAAAATAGTTTGTGCAAAGATGATGATTAAC
GATAAAACGGAACAACTGCAACCAGAACAATacaatatgaatgttcaaac
tctCTGCGAAGGAATGGACACCTTTTTTGAAGAATCATTGAAACATTGCA
NAATGGTTCTGCAGATAATGGTGCAGTGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011950XLOC_011950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021336-exon-sc0000385-1491911889:196218..196240TCONS_00021336-exon-sc0000385-1491911889:196218..196240Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:196218..196240TCONS_00021336-exon-sc0000385-1510915933:196218..196240Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:196218..196240TCONS_00021336-exon-sc0000385-1575043694:196218..196240Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:196441..197493TCONS_00021336-exon-sc0000385-1491911889:196441..197493Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:196441..197493TCONS_00021336-exon-sc0000385-1510915933:196441..197493Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:196441..197493TCONS_00021336-exon-sc0000385-1575043694:196441..197493Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:197728..197992TCONS_00021336-exon-sc0000385-1491911889:197728..197992Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:197728..197992TCONS_00021336-exon-sc0000385-1510915933:197728..197992Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:197728..197992TCONS_00021336-exon-sc0000385-1575043694:197728..197992Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:198394..198510TCONS_00021336-exon-sc0000385-1491911889:198394..198510Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:198394..198510TCONS_00021336-exon-sc0000385-1510915933:198394..198510Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:198394..198510TCONS_00021336-exon-sc0000385-1575043694:198394..198510Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:198699..199113TCONS_00021336-exon-sc0000385-1491911889:198699..199113Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:198699..199113TCONS_00021336-exon-sc0000385-1510915933:198699..199113Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:198699..199113TCONS_00021336-exon-sc0000385-1575043694:198699..199113Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:199324..199440TCONS_00021336-exon-sc0000385-1491911889:199324..199440Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:199324..199440TCONS_00021336-exon-sc0000385-1510915933:199324..199440Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:199324..199440TCONS_00021336-exon-sc0000385-1575043694:199324..199440Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:199629..199827TCONS_00021336-exon-sc0000385-1491911889:199629..199827Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:199629..199827TCONS_00021336-exon-sc0000385-1510915933:199629..199827Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:199629..199827TCONS_00021336-exon-sc0000385-1575043694:199629..199827Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1491911889:200139..200588TCONS_00021336-exon-sc0000385-1491911889:200139..200588Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1510915933:200139..200588TCONS_00021336-exon-sc0000385-1510915933:200139..200588Clytia hemisphaericaexon
TCONS_00021336-exon-sc0000385-1575043694:200139..200588TCONS_00021336-exon-sc0000385-1575043694:200139..200588Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021336-proteinTCONS_00021336-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:196218..200588 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.00548	2.47614	1.75089	0.63692	2.1556	0.446126	1.14825	4.97367	2.29557	1.60091	1.80069	2.86525	2.39585	1.43689	1.54035	1.02426	0.385465	1.29066e-08	0.312898	0.223378	1.10459	1.20652	2.2184	2.81271	0.888613	1.59803	1.50796	0.703331	0	1.49897e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021336 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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