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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021294 ID=TCONS_00021294|Name=TCONS_00021294|organism=Clytia hemisphaerica|type=transcript|length=955bp
TCGGTCTTTTTTCtggtcaaattttcattttttggttaAAACTCAAATAT
AACCTATTCACAACAACTTCCCAAAGTTTCAGGTCATAAAAAGAAGAGGA
AGGTTAAAAATTTTAGTTATAAAGATACTTACCTAGACAGAAATTGGTCT
CCGCCCGTTTGCGCTCGTATTTCCGCCCAGAGATAAAACAGCTATAATTC
TGCTTCTAGCGCTTCAAActgcttgaatttttttacgggACGTCTTAAAG
TCGCAAAGATTCTTTATGCTAAGTTCAAAAGTCGCTTACGCGTACCGCGA
TCGAGTTATAAACATTGTAAATATTCACCGCCCTTGAAATCATTTGAGAG
GTGGGTGTGCTTTATGTGTTTCTATGTGTTTATTTCCTGTTTTGAGTGGc
attttaaagctcatttatACTTAAAAGAGGTCTTTAATACTTCAAGGAAC
CATGCTTCTCAATATTTTATGAGATTTATTCTGAATTGAGTTTATAATAA
CCTCCAAAGATAAGCACAAGGTAcgtaaataattttctttgttttttgta
ttttcatcaCCATCATTCTTATGAGATTCTTTTAAACACCCATTTATAGT
GAGTAAGCATGTATGAGATATGTTTGCATATGTATTTGAAGTTTGATGAG
GATGATTTGCTACGATTTTGGATCATTTTGGTTCATTTCGGTTCattttg
gttaatttcggaaaactgtttaaaagtgaaagtgaaagtacaaAATTATA
TGTGGACGTAGCTTACACAAAACACTGGGAATTTCAAGGCAGCATTTGGA
CAAATACAGTTGACTTTTTGGTCTTTTTCTCTTGGATAGATTCAAATCAT
TATTGAAGTGAACAAAGCACAAATTTTTGCTCCTTGTACCCTTTTAAACT
GTTTTGCGGCAATTCTTGCGCAACTGCAGGCTATTTTGAGGATGCACCTC
AGATT Run BLAST on NCBI transcript from alignment at sc0000382:187959..189053+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021294 ID=TCONS_00021294|Name=TCONS_00021294|organism=Clytia hemisphaerica|type=transcript|length=1095bp|location=Sequence derived from alignment at sc0000382:187959..189053+ (Clytia hemisphaerica)
TCGGTCTTTTTTCtggtcaaattttcattttttggttaAAACTCAAATAT
AACCTATTCACAACAACTTCCCAAAGTTTCAGGTCATAAAAAGAAGAGGA
AGGTTAAAAATTTTAGTTATAAAGATACTTACCTAGACAGAAATTGGTCT
CCGCCCGTTTGCGCTCGTATTTCCGCCCAGAGATAAAACAGCTATAATTC
TGCTTCTAGCGCTTCAAActgcttgaatttttttacgggACGTCTTAAAG
TCGCAAAGATTCTTTATGCTAAGTTCAAAAGTCGCTTACGCGTACCGCGA
TCGAGTTATAAACATTGTAAATATTCACCGCCCTTGAAATCATTTGAGAG
GTGGGTGTGCTTTATGTGTTTCTATGTGTTTATTTCCTGTTTTGAGTGGc
attttaaagctcatttatACTTAAAAGAGGTCTTTAATACTTCAAGGAAC
CATGCTTCTCAATATTTTATGAGATTTATTCTGAATTGAGTTTATAATAA
CCTCCAAAGATAAGCACAAGGTAcgtaaataattttctttgttttttgta
ttttcatcaCCATTATTCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CATCATTCTTATGAGATTCTTTTAAACACCCATTTATAGTGAGTAAGCAT
GTATGAGATATGTTTGCATATGTATTTGAAGTTTGATGAGGATGATTTGC
TACGATTTTGGATCATTTTGGTTCATTTCGGTTCattttggttaatttcg
gaaaactgtttaaaagtgaaagtgaaagtacaaAATTATATGTGGACGTA
GCTTACACAAAACACTGGGAATTTCAAGGCAGCATTTGGACAAATACAGT
TGACTTTTTGGTCTTTTTCTCTTGGATAGATTCAAATCATTATTGAAGTG
AACAAAGCACAAATTTTTGCTCCTTGTACCCTTTTAAACTGTTTTGCGGC
AATTCTTGCGCAACTGCAGGCTATTTTGAGGATGCACCTCAGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021294-exon-sc0000382-1491911889:187959..188519 | TCONS_00021294-exon-sc0000382-1491911889:187959..188519 | Clytia hemisphaerica | exon |
| TCONS_00021294-exon-sc0000382-1510915933:187959..188519 | TCONS_00021294-exon-sc0000382-1510915933:187959..188519 | Clytia hemisphaerica | exon |
| TCONS_00021294-exon-sc0000382-1575043694:187959..188519 | TCONS_00021294-exon-sc0000382-1575043694:187959..188519 | Clytia hemisphaerica | exon |
| TCONS_00021294-exon-sc0000382-1491911889:188660..189053 | TCONS_00021294-exon-sc0000382-1491911889:188660..189053 | Clytia hemisphaerica | exon |
| TCONS_00021294-exon-sc0000382-1510915933:188660..189053 | TCONS_00021294-exon-sc0000382-1510915933:188660..189053 | Clytia hemisphaerica | exon |
| TCONS_00021294-exon-sc0000382-1575043694:188660..189053 | TCONS_00021294-exon-sc0000382-1575043694:188660..189053 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382 | supercontig | sc0000382:187959..189053 + |
Blast
The following BLAST results are available for this feature:
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