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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021291 ID=TCONS_00021291|Name=TCONS_00021291|organism=Clytia hemisphaerica|type=transcript|length=700bp
TATTGATAAGTCAGCCCGTGATAGATTGCGATTTCAAAGTTGTTTGCAGT
AAATGCGGTATATGACGAACAACGATATGAAACGGGAGTTACAGATAACG
AGAAATTCAAACGTTCGGAATGGGAACAGGCAGAATGCGGTATTCCTAAA
CACGGTAAGAACTTGACGGTAAAAGGGTGGTTACTCAAACTTTAGAAGTT
AAAACTGAAAACAAGCGGGATTTCCGGAATGCGGTCAGGTAAGTTTGCGG
AAACggtgaaaattcaaattttcagacgGAAAATTGCGGTATACGGAATC
TCGAGAATACGGTAAGGTTCACAATTTTACCGGTACAAACACGGAAAGGG
GTGCAATTCGACAAAAAACGTAGGTTTCGTTGAATTTCTGTTTTTCCGAT
GGCAATgaacaatttttccaaattgcaGAATTTGAGGATCAAACGTAGGT
TATCctcaaataactcaattttcaatagaaaaattCGATATGGTTAGAAT
TGGTTAAGAGTCTCCCGGTATGGTAAGGATACGGACGGAAACAGGCGTGC
AAACTAGGAAACGTGGACGAGATACCGGAACAATTACGGAACTGGGTATG
ATTTCGAGAAACAAGCGTGGGTTGTCCTCAAATGTGAATTTTCTGGAATA
CAAACACGTGGGGTCGGAATTCCAGACTCGATTTCCCAGACGGAGTAACA Run BLAST on NCBI transcript from alignment at sc0000382:98..926+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021291 ID=TCONS_00021291|Name=TCONS_00021291|organism=Clytia hemisphaerica|type=transcript|length=829bp|location=Sequence derived from alignment at sc0000382:98..926+ (Clytia hemisphaerica)
TATTGATAAGTCAGCCCGTGATAGATTGCGATTTCAAAGTTGTTTGCAGT
AAATGCGGTATATGACGAACAACGATATGAAACGGGAGTTACAGATAACG
AGAAATTCAAACGTTCGGAATGGGAACAGGCAGAATGCGGTATNCCCGTG
ATAGATTGCGATTTCAAAGTCGTTTGCAGTAAATGCGGTATATGACGAAC
AACGATATGAAACGGGAGTTACAGATAACGAGAAATTCAAACGTTCGGAA
TGGAACAGGCAGAATGCGGTATTCCTAAACACGGTAAGAACTTGACGGTA
AAAGGGTGGTTACTCAAACTTTAGAAGTTAAAACTGAAAACAAGCGGGAT
TTCCGGAATGCGGTCAGGTAAGTTTGCGGAAACggtgaaaattcaaattt
tcagacgGAAAATTGCGGTATACGGAATCTCGAGAATACGGTAAGGTTCA
CAATTTTACCGGTACAAACACGGAAAGGGGTGCAATTCGACAAAAAACGT
AGGTTTCGTTGAATTTCTGTTTTTCCGATGGCAATgaacaatttttccaa
attgcaGAATTTGAGGATCAAACGTAGGTTATCctcaaataactcaattt
tcaatagaaaaattCGATATGGTTAGAATTGGTTAAGAGTCTCCCGGTAT
GGTAAGGATACGGACGGAAACAGGCGTGCAAACTAGGAAACGTGGACGAG
ATACCGGAACAATTACGGAACTGGGTATGATTTCGAGAAACAAGCGTGGG
TTGTCCTCAAATGTGAATTTTCTGGAATACAAACACGTGGGGTCGGAATT
CCAGACTCGATTTCCCAGACGGAGTAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021291-exon-sc0000382-1491911889:98..226 | TCONS_00021291-exon-sc0000382-1491911889:98..226 | Clytia hemisphaerica | exon |
| TCONS_00021291-exon-sc0000382-1510915933:98..226 | TCONS_00021291-exon-sc0000382-1510915933:98..226 | Clytia hemisphaerica | exon |
| TCONS_00021291-exon-sc0000382-1575043694:98..226 | TCONS_00021291-exon-sc0000382-1575043694:98..226 | Clytia hemisphaerica | exon |
| TCONS_00021291-exon-sc0000382-1491911889:356..926 | TCONS_00021291-exon-sc0000382-1491911889:356..926 | Clytia hemisphaerica | exon |
| TCONS_00021291-exon-sc0000382-1510915933:356..926 | TCONS_00021291-exon-sc0000382-1510915933:356..926 | Clytia hemisphaerica | exon |
| TCONS_00021291-exon-sc0000382-1575043694:356..926 | TCONS_00021291-exon-sc0000382-1575043694:356..926 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000382 | supercontig | sc0000382:98..926 + |
Blast
The following BLAST results are available for this feature:
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