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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021151 ID=TCONS_00021151|Name=TCONS_00021151|organism=Clytia hemisphaerica|type=transcript|length=893bp
tgatattcaaaaatttacaaactttaaaaaaaaactttctcatTTTTCCT
ATAACAACATATAATATATACAAGAAACTAACAAATTATTCACAAAAGAA
GTATGATACacgaatttgaatttaaaattcgaaattctgataaaaataaa
tattcgaACTGTACAAGAAGTATTCtctaaaaatggccaaaatgaCTCAA
CAAAAAAGTTCAATGGATGCCATTTTTGATGACTTTAGAGTCAGCTCCGT
TTTCGATCAATAGTGCAGCACACTCGAAATTGCCGTATAAAACAGCATAC
TCCAATGGAGTGCGTCCGTTTGTATCAACACTATTTACTTTAGCCCCACA
TTCAACCAATAATTGTAAGCATTCCAAGAAACCAGCAGCTGAAGCGAGGT
GCAAAACAGTTGTACCTTCAGGGCTTGTCTCATTCACATCCATTTCATCA
GCAATTATACATTTTCTGGTTGTTGAAAAGTCATTGTCTAAAACTGCATC
AAATAATTTACCAGTTGTAAAAGCTTTGTTAGTTGATttgtttttgagta
attttgtgGTTGATTTGGATGGCGTTGGACACTCATTCTTAGCATCTGAT
GCCACAAACATATGACCTTTTACAAGGTTCTCCTTCTCTTTGCTCGATTT
CTTGCGAATCAACTTGAATTTACGTTCGATGGATCCGCCCCTGGTTGGCG
TTGGTAGACGGGCGGCAGCTGGTGAAGGTGATTTCATTCGGTTGTCTCGT
TCTGGTGCTGTCATGACGTCACTGGTTGTAactgataaaaataattcagt
tggtcgtttttgaaatttgtaaacCATATCTGCAAAGTATGTGtgcattt
aaaatatcttctGTCTTCTTAACTTGACTTATcgtgttttcag Run BLAST on NCBI protein sequence of Ankyrin domain containing protein >TCONS_00021151-protein ID=TCONS_00021151-protein|Name=Ankyrin domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MHTYFADMVYKFQKRPTELFLSVTTSDVMTAPERDNRMKSPSPAAARLPT
PTRGGSIERKFKLIRKKSSKEKENLVKGHMFVASDAKNECPTPSKSTTKL
LKNKSTNKAFTTGKLFDAVLDNDFSTTRKCIIADEMDVNETSPEGTTVLH
LASAAGFLECLQLLVECGAKVNSVDTNGRTPLEYAVLYGNFECAALLIEN
GADSKVIKNGIH Run BLAST on NCBI transcript from alignment at sc0000378:162890..163782 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021151 ID=TCONS_00021151|Name=TCONS_00021151|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0000378:162890..163782 (Clytia hemisphaerica)
ctgaaaacacgATAAGTCAAGTTAAGAAGACagaagatattttaaatgca
CACATACTTTGCAGATATGgtttacaaatttcaaaaacgaccaactgaat
tatttttatcagtTACAACCAGTGACGTCATGACAGCACCAGAACGAGAC
AACCGAATGAAATCACCTTCACCAGCTGCCGCCCGTCTACCAACGCCAAC
CAGGGGCGGATCCATCGAACGTAAATTCAAGTTGATTCGCAAGAAATCGA
GCAAAGAGAAGGAGAACCTTGTAAAAGGTCATATGTTTGTGGCATCAGAT
GCTAAGAATGAGTGTCCAACGCCATCCAAATCAACcacaaaattactcaa
aaacaaATCAACTAACAAAGCTTTTACAACTGGTAAATTATTTGATGCAG
TTTTAGACAATGACTTTTCAACAACCAGAAAATGTATAATTGCTGATGAA
ATGGATGTGAATGAGACAAGCCCTGAAGGTACAACTGTTTTGCACCTCGC
TTCAGCTGCTGGTTTCTTGGAATGCTTACAATTATTGGTTGAATGTGGGG
CTAAAGTAAATAGTGTTGATACAAACGGACGCACTCCATTGGAGTATGCT
GTTTTATACGGCAATTTCGAGTGTGCTGCACTATTGATCGAAAACGGAGC
TGACTCTAAAGTCATCAAAAATGGCATCCATTGAACTTTTTTGTTGAGtc
attttggccatttttagaGAATACTTCTTGTACAGTtcgaatatttattt
ttatcagaatttcgaattttaaattcaaattcgtGTATCATACTTCTTTT
GTGAATAATTTGTTAGTTTCTTGTATATATTATATGTTGTTATAGGAAAA
atgagaaagtttttttttaaagtttgtaaatttttgaatatca Coding sequence (CDS) from alignment at sc0000378:162890..163782 >TCONS_00021151 ID=TCONS_00021151|Name=TCONS_00021151|organism=Clytia hemisphaerica|type=CDS|length=639bp|location=Sequence derived from alignment at sc0000378:162890..163782 (Clytia hemisphaerica)
atgcaCACATACTTTGCAGATATGgtttacaaatttcaaaaacgaccaac
tgaattatttttatcagtTACAACCAGTGACGTCATGACAGCACCAGAAC
GAGACAACCGAATGAAATCACCTTCACCAGCTGCCGCCCGTCTACCAACG
CCAACCAGGGGCGGATCCATCGAACGTAAATTCAAGTTGATTCGCAAGAA
ATCGAGCAAAGAGAAGGAGAACCTTGTAAAAGGTCATATGTTTGTGGCAT
CAGATGCTAAGAATGAGTGTCCAACGCCATCCAAATCAACcacaaaatta
ctcaaaaacaaATCAACTAACAAAGCTTTTACAACTGGTAAATTATTTGA
TGCAGTTTTAGACAATGACTTTTCAACAACCAGAAAATGTATAATTGCTG
ATGAAATGGATGTGAATGAGACAAGCCCTGAAGGTACAACTGTTTTGCAC
CTCGCTTCAGCTGCTGGTTTCTTGGAATGCTTACAATTATTGGTTGAATG
TGGGGCTAAAGTAAATAGTGTTGATACAAACGGACGCACTCCATTGGAGT
ATGCTGTTTTATACGGCAATTTCGAGTGTGCTGCACTATTGATCGAAAAC
GGAGCTGACTCTAAAGTCATCAAAAATGGCATCCATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021151-exon-sc0000378-1491911889:162890..163782 | TCONS_00021151-exon-sc0000378-1491911889:162890..163782 | Clytia hemisphaerica | exon |
| TCONS_00021151-exon-sc0000378-1510915933:162890..163782 | TCONS_00021151-exon-sc0000378-1510915933:162890..163782 | Clytia hemisphaerica | exon |
| TCONS_00021151-exon-sc0000378-1575043694:162890..163782 | TCONS_00021151-exon-sc0000378-1575043694:162890..163782 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000378 | supercontig | sc0000378:162890..163782 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
The following BLAST results are available for this feature:
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