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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021079 ID=TCONS_00021079|Name=TCONS_00021079|organism=Clytia hemisphaerica|type=transcript|length=4139bp
AGTTAGCCTTTGGGTCGTTTCTGATTGCGGTTGCAAACCTACTGAATAAT
ACTATGGTTCTCTATAGTGACTCGTGTTCCACTCTTTTCTAGAAAACAAA
TatcaaagtaaacaaagtagaTAATAATTTACACAAAAGGAATCATTTAA
CAACAACCATATCATTACAAGCATCAATCATGAAGCAATCTTTGAATCCC
AGAGATAGCGGTAAATACATTGCAGAGAATACCAAATATGTTCAAATTCA
GCACAAGGAAATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGGGTA
GAAACAAATATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCTAAA
GCAATGAATGATGATACTCTGCATTGGATATTGACCGTTGAcacattaaa
tttttcattttggttGCCTAGGAACGAGCCTCAGTTTCAAGTCGAGTACA
AAGGGAAGACGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAATCGA
GCAGTCGAGgAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAAT
CTCCCTGGAAACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACAC
TTCCCATGCTCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGtg
ctatttgaaaaatttaacggAAATTTCGCAAATGTTATCAAGGAAGCTAG
TGGAGATGTAGAGAAACTTATAGAACTNGTGAAAAATTTAACGGAAATTT
CGCGAATGTTATCAAGGAAGCTGGTGAAGATGTAGAGAAACTTATAGAAC
TTGTCACGActaatttttcttgtttcaacGATGTTGGTTGTTTTGAAGGG
CAGCCAGTACAGTTCCAAAAACGAGTACAAATTCTAATTGCGGATATTTG
GGCCTGCTTCGAAGCAACCGGACACGGCCGTTTCCGTAATATTCACCATT
TAACTATGTTTCCAGATTACCGGGTCCCTCAAGCATTGTTATCCCTGGGT
GTGGTCACGTACACGGATGAGTTTATGAAACGTGTGCAGAGTGAGAAATT
ACTCCCACACGGAGAGCGCGAAGAAATGGAAATACGTGGTTGTTCTATTC
ACGCTATTGAGCTTTTACGGGAACATTTAAATAAAAGTTTAATGGGCGTT
GAAAATGAGGAACCCATTCTTAATTCAGTATTGATCGACTTTTATTTATG
GGATTTTGCTACCGAGAATGCTTCGGATCTTGGAAGCTTCCCTGAACATC
GCACGAGGTCTATTTATTATTGACTGGACATAATATGATTTTACAAATGT
TCTAGTTGTCAGATATGATTTATATATGATATTATATTTACTACGAAAAG
AAAGTAATCCTAGAAATCAACTGAGTTTGTTCCTACCAAATCTTCTTAAC
TACAGAAGGCGAGATTTCATTAAAGTTCAAACTATGAATAAAGCGTAGAA
TAGGACAAGATGGTCAAATTCATTAAAGTTAGCTAAGAATAAGAGAAGCC
CTACATGGAAATTACAAAGGATTTGACATTTGCTCCGGAGCTCAAGCCTT
CTAGCTGGTTTAATTCAGGAGTGTGCAGGTGATTTCTCTTTGTCATTATT
ATTACCACCCTTCGATCTTCCTGTCATCCTCGTCTAAAGACCTAGGTCGG
AAACATACAATAACCCTCCCTCTACAGCTCACGGTCGACCATCGCTGTCT
CCAATTCTCCCAACTCGAGCCCTGttgttctttttaaaatatctGCAAAG
GTATGTTTTCTCAGACGCTTTGGGCCAGCAAAACACCAGATTAGCAGATC
AGATATAACTTCCTGTTTCGAGCGGAAACAGTGTCCAGAGAAGGTAAGCA
TTCTGCAGGTCAGGACAGTTGAAATTCTTGGAAGTCCGTTATAGGTTTAT
ACATTTTTTCTCTAGATGTTGAATCAAAAGTCAACAAAACATAAGAAAGC
ATCTTACGCCGTATCGCTAGGACTTTGGAAAGAGTGATTTTACCTTTGCG
GAAACCGTTTTGGTTTTTCCTAAAAAGTAGCTCAAGTACAGGCACAATGC
GCCTTAGAATCATTTCATCATATATCTTGGCAGCGAGTGGCATCAACGTT
ATGCCTCTATGATTAGAACAGGGATAACACCACCTATTAACGAAGCAGAT
GGTGGACTGGAGTTTTCAAAGGTGCGGTTACAAAACTCAAGGAGAAGATC
AAGAACTAAGACTGGGTCTTAGTAAGTAAAGAGTGAAAGCTTTGAAATGA
TTTAACTagttttctcttctttttttggaAGAGCCTTCTTTTAGCTGGAT
GGAAGGGTGATCCTTTATGACCTTCGTTAATTGTCTTCCATGCAGCGGAA
TGTTGATGGGAGATATGCAAATTTGAAATGGAATCAATCTTTCCCTGAAT
AAAAATTGCTTGAGCATTGAGATAGGCATCATCCCGACGCTTTTGAGCAT
TTGAAAGGAGTCTAGATGTATTCCTTGTAGGACGAGTTTGGTGTTTGTTC
TACGCCTCTATGAGTGCTTTGCGTGCGTCATAAAGAAGGTTATTTTCAAA
GAGATTTTTTGCTTCTTGGGTAAAAGAGAGAGACTGATTTCTTTATTGGC
CTTGATCAGTGTTTGGTATTTGTTCTCTGGATCATCATCTGGCTTAGAGA
GCATATCAAATCTATTTTTAACCTCAACAGGTGTATGTATGACGAAGATC
AGAGTTAGTTTAAAGCTGTTGCCAGTTTATTGTTTTCATTGGGTCAGGTC
TTGGCTTTTTAGAAGATCTGAGGCTGAGAGAGACGTGATAAGAGACTACT
TTGTGATATGAGCCTACAGGGGGGAGAATAAGATTGCGAACATTCCTAAC
TCCATTTAGTGCGAACAAGAATATAATCAATTTGGGATTTGCTTTCGGAA
AGGTGTTGAaaaaaccaaagtttaaaagcTTTTTTCGTGAAAAATGTGTT
TGTTGCAAATAATTGAAATTGCTGCGTAAAATCAAAGAGTTTGTTCCCGT
TTCTATTGGTAAGCTTGTGAAAAGAAAATGGTACATCGTCCAGACCAACC
TGCGCATTCAAGTTGCCACAATAAGAAAATTGTACGCTGGTGTATTGATA
TAGAGATAGAGAAGAATAGAAATTATCCACATTGATCTCGTCTGAAACAT
TTGTGGGGCTGTAACAGGAAGTCAATGTCGTTTTTGGGTTACTGTTAAAT
TCAACAACAATAATACGATCGGAAATCTTTGTAAGTGAAAGTGAATTTTT
AAAAGCATTCGGAGAGAGCAAGATACCGATATCTCCGATAGTAGTTCCTT
GAGAATTTCGCCAAGTTGATGTTGTTACAAGTTTATTTTTACCaagcttt
ttgttttgaaatttgacattaGGATGAAAGGATCCTGTGTTCCTGAAGAC
TGAGAACGTcgatttttttgctttgaaaaacaGGAAAAAGCTCCTGTTTA
CGACTATTAGTTAGAGAAAGAGAGCGCGCATTGAAAATGCTAAATATCAC
AGGATGTTTACACGCaagaagttttgattttttattgttggtTCTGAACT
CTTTCCTATCACCACCTTCTCGCTCAGTAGAGACTGGAGAAGACGGTTCA
TCGATCTCAAGGGAAACAAGGTTTTAGGTTGGAGAAGCAGGGGCTTGAAC
CTTGGTGCTGTTAAGAGAGGTCATGATCGTTTCTTTCAATAGCTCTATGT
TTCTAATGCTCCGAGATACCGGATACATAGTATAAGTGACACTAAAAAGT
GTCTAAAGAGGTCAGACCCCATGGGGCAAAAAGAAAGCCCTGTGCAAGAC
GCCAACCTATTTATTATATTGTTTCCCTTTTTATGCTAAAGTCATAATAG
TGAAAACTTTTCGAGAGTAACCCATAAATTTGTGATATTATATGACCCCT
TGtgcaattttttatttactttttggtCTAGAAAGAACTGAATGAATGGT
CAAATAATTTGATTCTGTTATTGTGGTTCACAACCTGCTAAAGTTTAATT
TAGAAGATGCTTTTGTTCTTTAAGAGATGGGAAAATAAACTTAGACCGGA
CGATGACTCACGATCGCGCCACCTTTCGACAGAAAAATtccctttttgat
tttttgaggaCTACAACATGTAGTATTAACGAATCCAAG Run BLAST on NCBI protein sequence of TCONS_00021079-protein >TCONS_00021079-protein ID=TCONS_00021079-protein|Name=TCONS_00021079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MKQSLNPRDSGKYIAENTKYVQIQHKEIPKAALRLKEVMGRNKYSIKKWK
EWPLHPKAMNDDTLHWILTVDTLNFSFWLPRNEPQFQVEYKGKTYEDYEA
LCACVNRAVEEGILITTASYNKEISLETVNQVFRSSNGTTLPMLKQRWEN
LRQVGLVLFEKFNGNFANVIKEASGDVEKLIEXVKNLTEISRMLSRKLVK
M Run BLAST on NCBI transcript from alignment at sc0000377:231221..235974- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021079 ID=TCONS_00021079|Name=TCONS_00021079|organism=Clytia hemisphaerica|type=transcript|length=4754bp|location=Sequence derived from alignment at sc0000377:231221..235974- (Clytia hemisphaerica)
AGTTAGCCTTTGGGTCGTTTCTGATTGCGGTTGCAAACCTACTGAATAAT
ACTATGGTTCTCTATAGTGACTCGTGTTCCACTCTTTTCTAGAAAACAAA
TATCAAAGTAAACAAAGTAGATAATAATTTACACAAAAGGAATCATTTAA
CAACAACCATATCATTACAAGCATCAATCATGAAGCAATCTTTGAATCCC
AGAGATAGCGGTAAATACATTGCAGAGAATACCAAATATGTTCAAATTCA
GCACAAGGAAATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGGGTA
GAAACAAATATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCTAAA
GCAATGAATGATGATACTCTGCATTGGATATTGACCGTTGACACATTAAA
TTTTTCATTTTGGTTGCCTAGGAACGAGCCTCAGTTTCAAGTCGAGTACA
AAGGGAAGACGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAATCGA
GCAGTCGAGGTAAACAGCAATTAATTAGCTACACGCTTTTTATAAGAACA
TCGAATAGTTTTAATAGCCTCTGGATGTGCTAAACTCTTTGTGTTTTAAG
CCAAAAAATGTTCTTAAAATGTTATTAATTTCACCATTTCGTGAGCATTT
TTGTCCATTTCTAAGAAATCAGTTGTTTTTAGAGGTCGCAAAGCCTTTAA
ATGTTCTTAACTTTTTCCTAGTATTTTGGCCATTGAAGCCTTATGTTCTT
ATATAGTTTGTTCTTATAAAAAACATGTATTTGCTTAGTATCACTTTAGC
ACGGGGTTTATTTAAAGAAGACTGGATGGCCGCGATCAAGTAGCCCGCTC
GTAAATGGTAATTCTCAATGTTGAGCTTTTCTATAAGCGGAATGTAAAGC
TGTTGGCCAGGTGTTAGTATTCCGTTTTAAATTTTATTTTTCAACTCCAA
GTAGTTCAATTCTATTTGGAACACAGGTTGTCATGCTGTAGCAAACGGTA
AAATTAAAAATGGCTTTTTTAAAAATCTAATTAATAATCTAACTTTCGAA
TTTTTTCAGGAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAAT
CTCCCTGGAAACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACAC
TTCCCATGCTCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGTG
CTATTTGAAAAATTTAACGGAAATTTCGCAAATGTTATCAAGGAAGCTAG
TGGAGATGTAGAGAAACTTATAGAACTNGTGAAAAATTTAACGGAAATTT
CGCGAATGTTATCAAGGAAGCTGGTGAAGATGTAGAGAAACTTATAGAAC
TTGTCACGACTAATTTTTCTTGTTTCAACGATGTTGGTTGTTTTGAAGGG
CAGCCAGTACAGTTCCAAAAACGAGTACAAATTCTAATTGCGGATATTTG
GGCCTGCTTCGAAGCAACCGGACACGGCCGTTTCCGTAATATTCACCATT
TAACTATGTTTCCAGATTACCGGGTCCCTCAAGCATTGTTATCCCTGGGT
GTGGTCACGTACACGGATGAGTTTATGAAACGTGTGCAGAGTGAGAAATT
ACTCCCACACGGAGAGCGCGAAGAAATGGAAATACGTGGTTGTTCTATTC
ACGCTATTGAGCTTTTACGGGAACATTTAAATAAAAGTTTAATGGGCGTT
GAAAATGAGGAACCCATTCTTAATTCAGTATTGATCGACTTTTATTTATG
GGATTTTGCTACCGAGAATGCTTCGGATCTTGGAAGCTTCCCTGAACATC
GCACGAGGTCTATTTATTATTGACTGGACATAATATGATTTTACATATGT
TCTAGTTGTCAGATATAATTTATATATGATATTATATTTACTACGAANCA
TGATTTTACAAATGTTCTAGTTGTCAGATATGATTTATATATGATATTAT
ATTTACTACGAAAAGAAAGTAATCCTAGAAATCAACTGAGTTTGTTCCTA
CCAAATCTTCTTAACTACAGAAGGCGAGATTTCATTAAAGTTCAAACTAT
GAATAAAGCGTAGAATAGGACAAGATGGTCAAATTCATTAAAGTTAGCTA
AGAATAAGAGAAGCCCTACATGGAAATTACAAAGGATTTGACATTTGCTC
CGGAGCTCAAGCCTTCTAGCTGGTTTAATTCAGGAGTGTGCAGGTGATTT
CTCTTTGTCATTATTATTACCACCCTTCGATCTTCCTGTCATCCTCGTCT
AAAGACCTAGGTCGGAAACATACAATAACCCTCCCTCTACAGCTCACGGT
CGACCATCGCTGTCTCCAATTCTCCCAACTCGAGCCCTGTTGTTCTTTTT
AAAATATCTGCAAAGGTATGTTTTCTCAGACGCTTTGGGCCAGCAAAACA
CCAGATTAGCAGATCAGATATAACTTCCTGTTTCGAGCGGAAACAGTGTC
CAGAGAAGGTAAGCATTCTGCAGGTCAGGACAGTTGAAATTCTTGGAAGT
CCGTTATAGGTTTATACATTTTTTCTCTAGATGTTGAATCAAAAGTCAAC
AAAACATAAGAAAGCATCTTACGCCGTATCGCTAGGACTTTGGAAAGAGT
GATTTTACCTTTGCGGAAACCGTTTTGGTTTTTCCTAAAAAGTAGCTCAA
GTACAGGCACAATGCGCCTTAGAATCATTTCATCATATATCTTGGCAGCG
AGTGGCATCAACGTTATGCCTCTATGATTAGAACAGGGATAACACCACCT
ATTAACGAAGCAGATGGTGGACTGGAGTTTTCAAAGGTGCGGTTACAAAA
CTCAAGGAGAAGATCAAGAACTAAGACTGGGTCTTAGTAAGTAAAGAGTG
AAAGCTTTGAAATGATTTAACTAGTTTTCTCTTCTTTTTTTGGAAGAGCC
TTCTTTTAGCTGGATGGAAGGGTGATCCTTTATGACCTTCGTTAATTGTC
TTCCATGCAGCGGAATGTTGATGGGAGATATGCAAATTTGAAATGGAATC
AATCTTTCCCTGAATAAAAATTGCTTGAGCATTGAGATAGGCATCATCCC
GACGCTTTTGAGCATTTGAAAGGAGTCTAGATGTATTCCTTGTAGGACGA
GTTTGGTGTTTGTTCTACGCCTCTATGAGTGCTTTGCGTGCGTCATAAAG
AAGGTTATTTTCAAAGAGATTTTTTGCTTCTTGGGTAAAAGAGAGAGACT
GATTTCTTTATTGGCCTTGATCAGTGTTTGGTATTTGTTCTCTGGATCAT
CATCTGGCTTAGAGAGCATATCAAATCTATTTTTAACCTCAACAGGTGTA
TGTATGACGAAGATCAGAGTTAGTTTAAAGCTGTTGCCAGTTTATTGTTT
TCATTGGGTCAGGTCTTGGCTTTTTAGAAGATCTGAGGCTGAGAGAGACG
TGATAAGAGACTACTTTGTGATATGAGCCTACAGGGGGGAGAATAAGATT
GCGAACATTCCTAACTCCATTTAGTGCGAACAAGAATATAATCAATTTGG
GATTTGCTTTCGGAAAGGTGTTGAAAAAACCAAAGTTTAAAAGCTTTTTT
CGTGAAAAATGTGTTTGTTGCAAATAATTGAAATTGCTGCGTAAAATCAA
AGAGTTTGTTCCCGTTTCTATTGGTAAGCTTGTGAAAAGAAAATGGTACA
TCGTCCAGACCAACCTGCGCATTCAAGTTGCCACAATAAGAAAATTGTAC
GCTGGTGTATTGATATAGAGATAGAGAAGAATAGAAATTATCCACATTGA
TCTCGTCTGAAACATTTGTGGGGCTGTAACAGGAAGTCAATGTCGTTTTT
GGGTTACTGTTAAATTCAACAACAATAATACGATCGGAAATCTTTGTAAG
TGAAAGTGAATTTTTAAAAGCATTCGGAGAGAGCAAGATACCGATATCTC
CGATAGTAGTTCCTTGAGAATTTCGCCAAGTTGATGTTGTTACAAGTTTA
TTTTTACCAAGCTTTTTGTTTTGAAATTTGACATTAGGATGAAAGGATCC
TGTGTTCCTGAAGACTGAGAACGTCGATTTTTTTGCTTTGAAAAACAGGA
AAAAGCTCCTGTTTACGACTATTAGTTAGAGAAAGAGAGCGCGCATTGAA
AATGCTAAATATCACAGGATGTTTACACGCAAGAAGTTTTGATTTTTTAT
TGTTGGTTCTGAACTCTTTCCTATCACCACCTTCTCGCTCAGTAGAGACT
GGAGAAGACGGTTCATCGATCTCAAGGGAAACAAGGTTTTAGGTTGGAGA
AGCAGGGGCTTGAACCTTGGTGCTGTTAAGAGAGGTCATGATCGTTTCTT
TCAATAGCTCTATGTTTCTAATGCTCCGAGATACCGGATACATAGTATAA
GTGACACTAAAAAGTGTCTAAAGAGGTCAGACCCCATGGGGCAAAAAGAA
AGCCCTGTGCAAGACGCCAACCTATTTATTATATTGTTTCCCTTTTTATG
CTAAAGTCATAATAGTGAAAACTTTTCGAGAGTAACCCATAAATTTGTGA
TATTATATGACCCCTTGTGCAATTTTTTATTTACTTTTTGGTCTAGAAAG
AACTGAATGAATGGTCAAATAATTTGATTCTGTTATTGTGGTTCACAACC
TGCTAAAGTTTAATTTAGAAGATGCTTTTGTTCTTTAAGAGATGGGAAAA
TAAACTTAGACCGGACGATGACTCACGATCGCGCCACCTTTCGACAGAAA
AATTCCCTTTTTGATTTTTTGAGGACTACAACATGTAGTATTAACGAATC
CAAG Coding sequence (CDS) from alignment at sc0000377:231221..235974- >TCONS_00021079 ID=TCONS_00021079|Name=TCONS_00021079|organism=Clytia hemisphaerica|type=CDS|length=1212bp|location=Sequence derived from alignment at sc0000377:231221..235974- (Clytia hemisphaerica)
GAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAATCTCCCTGGA
AACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACACTTCCCATGC
TCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGTGCTATTTGAA
AAATTTAACGGAAATTTCGCAAATGTTATCAAGGAAGCTAGTGGAGATGT
AGAGAAACTTATAGAACTNGTGAAAAATTTAACGGAAATTTCGCGAATGT
TATCAAGGAAGCTGGTGAAGATGTAGATGAAGCAATCTTTGAATCCCAGA
GATAGCGGTAAATACATTGCAGAGAATACCAAATATGTTCAAATTCAGCA
CAAGGAAATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGGGTAGAA
ACAAATATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCTAAAGCA
ATGAATGATGATACTCTGCATTGGATATTGACCGTTGACACATTAAATTT
TTCATTTTGGTTGCCTAGGAACGAGCCTCAGTTTCAAGTCGAGTACAAAG
GGAAGACGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAATCGAGCA
GTCGAGGAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAATCTC
CCTGGAAACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACACTTC
CCATGCTCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGTGCTA
TTTGAAAAATTTAACGGAAATTTCGCAAATGTTATCAAGGAAGCTAGTGG
AGATGTAGAGAAACTTATAGAACTNGTGAAAAATTTAACGGAAATTTCGC
GAATGTTATCAAGGAAGCTGGTGAAGATGTAGATGAAGCAATCTTTGAAT
CCCAGAGATAGCGGTAAATACATTGCAGAGAATACCAAATATGTTCAAAT
TCAGCACAAGGAAATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGG
GTAGAAACAAATATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCT
AAAGCAATGAATGATGATACTCTGCATTGGATATTGACCGTTGACACATT
AAATTTTTCATTTTGGTTGCCTAGGAACGAGCCTCAGTTTCAAGTCGAGT
ACAAAGGGAAGACGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAAT
CGAGCAGTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021079-exon-sc0000377-1575043694:235466..235974 | TCONS_00021079-exon-sc0000377-1575043694:235466..235974 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1575043694:234131..234915 | TCONS_00021079-exon-sc0000377-1575043694:234131..234915 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1575043694:231221..234065 | TCONS_00021079-exon-sc0000377-1575043694:231221..234065 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1510915933:235466..235974 | TCONS_00021079-exon-sc0000377-1510915933:235466..235974 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1510915933:234131..234915 | TCONS_00021079-exon-sc0000377-1510915933:234131..234915 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1510915933:231221..234065 | TCONS_00021079-exon-sc0000377-1510915933:231221..234065 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1491911889:235466..235974 | TCONS_00021079-exon-sc0000377-1491911889:235466..235974 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1491911889:234131..234915 | TCONS_00021079-exon-sc0000377-1491911889:234131..234915 | Clytia hemisphaerica | exon |
| TCONS_00021079-exon-sc0000377-1491911889:231221..234065 | TCONS_00021079-exon-sc0000377-1491911889:231221..234065 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377 | supercontig | sc0000377:231221..235974 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019438 | Q_salvage |
Blast
BLAST of TCONS_00021079 vs. Swiss-Prot (Human)
Match: QSPP (Queuosine salvage protein OS=Homo sapiens GN=C9orf64 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.048e-46 Identity = 80/182 (43.96%), Postives = 123/182 (67.58%), Query Frame = 2
Query: 731 EKFNGNFANVIKEAGEDVEKLIELVTTNFSCFNDVGCFEGQPVQFQKRVQILIADIWACFEATGHGRFRNIHHLTMFPDYRVPQALLSLGVVTYTDEFMKRVQSEKLLPHGEREEMEIRGCSIHAIELLREHLNKSLMGVENEEPI--LNSVLIDFYLWDFATENASDLGSFPEHRTRSIYY 1270
EKF G+F N ++E+ +KL+ LV +F + DV FEG+ V F KR QIL+AD W+ E G G F++I +TMF DYR+PQ L LG + Y+D+ +K++ ++L +G+R+E+EIRGCS+ +EL+R+ L + L+ + E+P +NS+L+D+YLWD+A ++ D+ P HR R IYY
Sbjct: 161 EKFGGSFLNCVRESENSAQKLMHLVVESFPSYRDVTLFEGKRVSFYKRAQILVADTWSVLEGKGDGCFKDISSITMFADYRLPQVLAHLGALKYSDDLLKKLLKGEMLSYGDRQEVEIRGCSLWCVELIRDCLLE-LIEQKGEKPNGEINSILLDYYLWDYAHDHREDMKGIPFHRIRCIYY 341 HSP 2 Score: 147.517 bits (371), Expect = 1.041e-37 Identity = 72/185 (38.92%), Postives = 114/185 (61.62%), Query Frame = 3
Query: 180 MKQSLNPRDSGKYIAENTKYVQIQHKEIPKAALRLKEVMGRNKYSIKKWKEW-PLHPKAMNDDTLHWILTVDTLNFSFWLPRNEPQFQVEYKGKTYEDYEALCACVNRAVEEGILITTASYNKEISLETVNQVFRSSNGTTLPMLKQRWENLRQVGLVLFEKFNGNFANVIKEASGDVEKLIELV 731
M LNPR+S K+IAEN++ V I + + A L + ++ WK L+P+A ++ ++W+ DTLNFSFW ++E + V Y+GKTY Y +LCA VNRA++EGI IT+ASY ++L+ V + RS ++P++++R L + G +L EKF G+F N ++E+ +KL+ LV
Sbjct: 1 MDGLLNPRESSKFIAENSRDVFIDSGGVRRVAELLLAKAAGPELRVEGWKALHELNPRAADEAAVNWVFVTDTLNFSFWSEQDEHKCVVRYRGKTYSGYWSLCAAVNRALDEGIPITSASYYATVTLDQVRNILRSDTDVSMPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLV 185
The following BLAST results are available for this feature:
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