TCONS_00021041 (transcript) - C. hemisphaerica

Overview
NameTCONS_00021041
Unique NameTCONS_00021041
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00021041 ID=TCONS_00021041|Name=TCONS_00021041|organism=Clytia hemisphaerica|type=transcript|length=4116bp
CCGCGCACGAGAGAAAGGCGGTTAGTTTGTTATTGTTAACATAAGAAAGC
GATATGTTTTACTTTACTTAGCACTTTTAAGCCGCATCATAGTCGATGTT
GTCAGACATTTCAGagttgtttgataaaaaagtcgGCTAGCAAGCATATC
CTCCGTTTTATTAACACTCTTGTTATATCTCATAGCGTATGATCCTGGTT
GAAGACGACGTTCGTGTAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAA
AGTACACGTATAACGCACCACTTGGCAGTTGGTATGGTTTTGTTGTGGCT
TCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGGATGGAACCCA
AAGAtgaaagaagccattgtagtgcaatgtttacatttttggaaagttct
aAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCTTTTACGTGTT
GTGTCGTTCACCACGTTGAGTTGAATTGGTTGGTTATATTTTAAAGGCTT
GATTCATACTTTTGCTTTGATACATTTGATTCTCAATATCAACGTCATAC
TTTGAAGTTCTGTTTATCCTCTCAGTTAGTATATTTTAAGTTCACCTCTG
ATTGGATATATAAACACTGCCTCGAAAGACAACAGGAAACATATGATTAT
GAATGAAGGGTAGTGTTTTATAGGTAGTAGAACCTAGAGGTGccttgttt
ttcatttgtttcatacTTCAATTGGTAATTTTAGTGATTGCTAAAGTATT
TGGAGAAGCATTTGCTCTCTGACTGGATGAGGTGCTCTGCATTGTGGTGG
TGGCGCACAAAcaatttttagtaaaaaaaccATTCCTTTCATCTTTTAGt
gaatagaaaaagaaagtagcATTACATGAATCAAAATGACAGAAATGGTT
ATCATGCCAACAGATGAACGTATCCCACCGATGGGATCAGAAGCTGCAGA
TACACACTTCAATGAAACTGCTGCATACGATCCTAAATTAAATACAAGAG
ACTTATCACATAATAATAACAAACAATGTATTCCTCATTACGAACATTGG
AAGGACAGCTTACCAGATCTATTAGATGACACAGAaggatataaattatt
ttacgAATTTCTAGAGCAAGATAAAAGTATCACGTTATTTGAATGTTGGT
ATTGCTGCAATCAATATCGTAACTTGCCACCAACTAGAACTAGTGCCAAA
GACATTTATCATAGATTTGTAAAGAAAAAGGACCCACATATTCCAATTTC
TGAtcaagcaagaaataatttggtATTGAGGATAAAGGCTAACGATATTA
CAGAAAAAATTTATGAGGAAATTGAAAAGGAAGTTTACACTAATTTAAGG
GACAtttgttatccaaaatttttaaaatcagactGTTTTAATCAATATTG
CGAAAGTTCTGGTCAAATGCGGTATGCAGAATATAATACCGATTATGGAA
AGCCATCAACAAAATATAGTGGAGTCCTTGATCACATTGACAAGCATGAC
CAGTATCAACCTCAATCAAGATCAGAtTATGAAAGGCAGTATGAATGCGC
CCGTCATCCACACCACGATCGAGTTCACGGACCCTCATCCAATTATGACG
ATCATCATAGCATGCCGTCAGATTATGATCGTAGCTCTATAACAGATTCC
AAAACTTCCATggGATCAAGTAGTCGACACGGTAGACCGTCTCGAGGTCA
CAATCGCGATTACGATGGACCAATGGACGTTAACAATTTCAAGCCGCGTA
CGCAGCGAATCAATCAAGATCGCATGAAACCGATGAAACCGACAGACTTT
GCTGCACTTTTGAcgcaaaaacttgaaaaagtttTGATCGACCGAACTAG
AGATGGCCATGATAATTCGTCACACCATTCTCATGGTGACTCAATGGATC
TGTCTTCAATGAAACATCATCTACCAGGTGGACACAACAGTCGAGTACCA
CCCCACCATCAACCTCACATACACGATTTCGATGGCCAGAGTGAGAGTGA
CGCCCAATCTTGGGTGCTCTCTGACCGGCCAAGCGTCGCCGGACAATCAT
CACATAGTGGCTCACACAGTggtattttaatgaaaaataaagcaaaagaa
CTCAGAGATAAAATTCATCATCATATTCGAAGTGACTTGAAAGAATGTCG
TTGTGCTGAGTGCCGCCTCACGCCCTCCGTACATTCGGGCGGTCGTCACG
AACACGATTCGCATGCACGACACGGTGGCTCAGAACATGGTTTTTATCCA
CACAGTAGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGA
CCGATACAATACAATGTCGTCATCATCTCACCATCGTGGTTCCTCGCGCA
CGCGTGAAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGT
AAAATTTATTCTTGGATGGAGAAAAACGAACGTTACCAACATCAAAAATC
GTACCCAGACCCCTCCCCGTCACCTTCTTTACGTCGAAAGAAAGCACCTA
TACAATATAACACAAGTAGGTCACAGAACTCTCAACAGCCTATTGCGCAA
GATACGGGCATGCCGTTATTACCACAACCTGACCCAGACAATGTTTTACA
AGAGGTTAAACGGAAACTGGAAGAACCCTCACGATCACAACAAAATCATC
ACCGATCTTCaagacaacaacaacaatatcATACGCCCCATTATGAGGGC
GGATACCACCCTCATCACGATAATCAATCAATGGCTTCTGCTCCTTGGTC
GATGTCTGATAACTCTTCAATTATTTCTTATAACCCTTCACAAGTTTCTA
CCGTACCTTCATCTGCGTCTAGATTATGGAACGCTCAAGGTTATTACAAA
GATGCCGGTAGTGAAGTCAGAGACGATCGTTGCACGCCTAGCGAAGTTCA
CTCGCAAGCAGCTTCTAAACACAGCGGTCCGCGTAGCGTGACACGTAGTG
ATCATATGAGCGCTGCACGCAGTGATCATCACAGTGACGTAAGATCACAA
TCGACGGGAATTAGTTACGGCAGTGACGGTAGTAAAGGACGTTCTTCTTC
ttctaaaaataaaactgtTATCACGTATTATTACGGTAGTGAACCTATCC
CGTACCGTATTAGCGTTCCGACTACGGAGGTTACGTTGTCACAATTCAAA
CTCGAAACCAAACGTGGTAATTATCGCTTTTTTTTCAAGACTGTTTCCAG
TGTCGATGGTGAGGTTGTTTGGGAAGAATTCAAAAACGATGATGATGTCC
TACCTAAATTTAATGATAAAATTGTTGGCAAAGTCGATAAGATCTAATTG
ACTTTGGTTTTTGGATTTATTTGTTGTTATTGTTTGGATTATTTCTCTTA
ATGATAATCATGACGGAATTGTTGTTAATGTGGACCAAGTTTTGATTCTA
CCATAATGAACTTATaatatttatgacgtaatgttttaaacAGAAGCACC
CTAAAAGACCAAACAGCCGGTCTAATTTTGAATTAAACAATAAACTAGGC
CCTGGCTATTTTGGGTGCTTGCGTCTGAAAAATTCCGACATGAATGATTG
ATCATGAATTGATAAATgcgttgtttttttatatagaTCCTCGTGTTaat
gattacgtcatgaatattattGTCCGCTTGGTTATATTATCactgtcttt
tttttttcaaatttatgctCTGCATTTAAAACTTTATCACTATTTATATT
TTGCCAATTCTTCTACCCCTGTTTGATACCCCTAAatatttgttcaattt
tttaccTTCCTCGTACAGGTTCGGGAatcgaaattcattttgacaaattt
gaactttttgccaAGTGTCAAGATATTCTTTCCTTGCTTACTCTTGGCTT
TACCTTTCCAACTTTCTTCCTTTTTCCTTTTATATTCCttcctaaatttt
ttaaaatagatattttacaattttctccCTTTAAGTTAATATACAATATA
CTGAAaagagttttattttttactagATTTATCTTACTACCCCATGATTG
TATGATATTTTAAGATAAACCCCGAAATATACCCCTTTATAATTACACCC
CAATATtgtgaaaaaatgaaataatatcaaaaaatacaacaaaaggaaaa
atgtgaaaattaacaa
Run BLAST on NCBI

transcript from alignment at sc0000377:136648..149964+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00021041 ID=TCONS_00021041|Name=TCONS_00021041|organism=Clytia hemisphaerica|type=transcript|length=13317bp|location=Sequence derived from alignment at sc0000377:136648..149964+ (Clytia hemisphaerica)
CCGCGCACGAGAGAAAGGCGGTTAGTTTGTTATTGTTAACATAAGAAAGC GATATGTTTTACTTTACTTAGCACTTTTAAGCCGCATCATAGTCGATGTT GTCAGACATTTCAGagttgtttgataaaaaagtcgGCTAGCAAGCATATC CTCCGTTTTATTAACACTCTTGTTATATCTCATAGCGGTAGgtttttttg tttgtatatAAGAAGCTTTTCCTATTCAATGACATGTCATATAAATAATA CTTGCCAAGAATGGTGTATATTTTGTCAATAGTAATAAATGAGTAGTGAA GGCATAGTCGGTAAACTTAACCAAGcatgttaatttttatttttcataca tGTTTCGATTTAATAATCATCATCAGTGTTTTTAGTTCTAAAAATAGATA AATGTGTCACTTTGTCAATAGTATGATCCTGGTTGAAGACGACGTTCGTG TAAAGGTTTGTGTTGTGGAGAACGGGTGTAGCAAAGTACACGTATAACGC ACCACTTGGCAGTTGTAAGTTATATTATTTGCTGGATACATAATGTATTT GTTGTCTTTAGGTTTGTTTGGGCTTGCTGAGGGGTTAGGTCTGTGTAAAC TTGCTTTAGGAAGATGATGTCGTGTTTCGACTGCATTTTTACCCTTATTT CAAATGATTACTAGTATGTCGCTACACCCATGTCTCATCTCAGTATTGTA CATCTGTACATATCACATTACTGTATCCTTTTAAGACTGAGATTTCTGAA CGGAACACAGGCCCAGCGGAAGCGGGAAGACTTaggagccttcagcctcc ccactttaaaCCTTGAAGGGTTGTTCCACTGNCCCAGCGGAAGCGGGAAG ACTGaggagccttcagcctccccactttaaaCCTTGAAGGGTTGTTCCGC TGGGCCTGGAATAGGAATATGGGCACTGATACATGAGTAAGATGGGAGAT TAAAGcataatacacttttttataagaaaaattttataagaacaatgagg ctcgaAATTGccacaaaataagaacaatactgagcctggaattactcaat ttcaagcaatttaggggtcagaTTAGTAAAAATtggatacatgttttttt ataagagcatccaaaatttttgaagcctgcgaatgaactttttgagtttt aagcctataaatgttcttaacatgttcttattttgaccattttgttagta tttttgaccattttcctaagaaatagggtgttttttagtctacaaagcct tgaaatgttcttaacttgttcttaacattttggccatcgaagccttatgt tcttatatagtttgttcttataaaaaagtatacTGTAACGCTTAAAACAC CTCAATTACATCTTACaaaacaggataagaacaatttgaggctcaaagtg ccaaaaaataagaacagccgagcctcagccaaattttactggttcttata aaagaaagtgtaCAGCACACCAATGGTGATTTGGAATCATTTAGTGTTGG CTGGGATTGCCTTTAATTAGTATATCTAAAAGGTATTAGTACCAGAACTC CAAAGACCCGTGAGATAATAatttagttttaaaaacagtTTCAGGAATTT GATCGGAAATGTAAAAATTTCACCTCCGTAAAAAGCGGTTGTTTACTCAG Tcagttaaaagttttgtttatacaagaatattttaaatattttctttgat atATGCAGTTTATAATTCAGTATAATGGTCAAATCGTGggaaaattgctt aaaataacATAATCACTCACCCATTTTACATATTCTATAGTTCAGTGCGc tttttttgttaaataaaaGATTACAGGAAGCGAATAGGGTGTAACTATGG TAAATTGGTCTTTGATGGAAAGGCTTTTGCCGATCAAAAACAGCCATACA CACATTGagtaaaagaaataaaaagtaaaagttaaATAATTCGTTATTGT GAATATATTCATCGATTAAATAATTtaacaaaaaaggtttttcgttctca ttttttttataattttgatcaTAGTAACTCATTGTAAGGGTTCTCGAAAA TGCGATGAGAATGTTTTTAAGAAAACGCGTAATAAAGCAGTAGCGACACT GTAATTAGGTGAATAGATGCGGTTCTTGATTTCATGATGGTCCCTAAATA TATTTTAGGAAAAACTATACAAAATGATACGAGTCTTGGTTGGGTAAACC AAAGTATTCTAAACATTTCCATAGTGACCTCTtttcagaaaaacattttt taataacaCAGTACGCAATCTTTATCCATATCTTATTGTACCTGTTAAGA GCATGCTAAAAATTAGCTTGTCGACAGAGGCGAAAAATGCCGAAAACTCG CGAATTTTAGCTCTTCATTGCGCTCTTGAAGGCTCTGTCTCCTATTCTTG TTTGCACGTCCTTCTTAAGTAAACTTTAGGTAAAGAAAAACGACACTGCA CTTCTtgtaaaaaagcggttttctgtAACTCATATAATAAACactaaaaa caatttttttattctagTCTTTGCTTAAAGCGCGGCTAACAATAGAGAAG CAAAGTACTTTAAcacattcgaaaaaaaaagttcggTTAGTTAAGTCCTG TGTTTGCTATTGCATAGAGTTTGCCGACCGACAGTTTTCTCTCTTTCTAT CTCATATAAGAAGGGAGATGTGGTTTCAGAGTAtaggtttgagatttttt ttgtcTAGCTCCTACAAATTACCGTTTTTAATTAATTATAACAAGGAGAA GAGAAAAGAACGCTTTCTTTCGCACATGTGCTAAATCTTATTGTTAGTAG ATATATGATAACAATAATGTCTTCTCCTATTGGTGCGGTTTCTCCTCATC GCGCAATCTGATTGGTGCGGCTTTGAACAAAAGAAGTGACGTCGAGAGGT TACTACATAGCAAATAAACCGCTAGTGAGATCGGTTTCTTTGATGTACTA TGAAAAGCTAACAGACGTTCAAAGTTTTATATATATCTTTGCTGGGTGCC GTGTAGCAGAGAGAGAGGAGATTTTTTATGTAGAGGATTCAGGCGAAAGA TgaatataataataacaatactAATAAAAAAGTAAGAGAGAGAGAAAAGA GTTGAAGTGAagcagagagagagagagaatatATACACGAGAATTTGGTT TTGTTGTGAGGGTTGTGAGCATGTAGTTATACATGTATTATATGAAAGGT CNGAGAGAATATATACACGAAAATTTGGTTTTGTTGTGAGCATGTAGTTA TACATGTATTATATGAGAGGTCGATATtacattttgtgcttgttgttGTT ctgcattttattttcataaaatatactGATAGATCCTCTAGCTACTTGAT ATTAAGCTTTTGGTAAAATGATACGATATGGATTGTATGTTTTGAGTGTA TGTATGTGTATACATgtaattttatttcaaacaaagataatacaaatttc aattttttgcactGCAAAACACTGACATAATCCTAGTCAAGTCAACAAAG AAAGGTTTGAAATCTCAAGAGGTTACCTTGCCAAATGATTAGAGAAGAGA GAGAGAAGAAAAATACATGATATCAATTTGTTATACGGATGCTTCATAGA GTTTGAAAATTATAATCACACAAAATGGATAGATATAATTGAACAATTAG ATGgcttttttgatgttgtttaTGATGGCTCGTCAACTGAAAGTCATCAT TTTGTTCTGTGTTTTGTTTTGTGGATAGCCGCTGAGAATTGGTTACTGTT ACTTAGGGAGAACTAGctataaagaaagaaatttcaaaagttgaTGATTT TATAAAAGTTTGCAAACTCAACACGGTAAATCACTTACCGAGAAATTGAA CAAGCCTTGAAACGATTTCAACGATTGAAAGAAACCAGAAAGGAACATAC CAGCTAAGGGTTGAATTTTCTATTACATTTGTTGTTATAGGGTATGGTTT TGTTGTGGCTTCGCTTTTCGCTCCCTGCCGCCTGCCGCCGTCTGGCCTGG ATGGAACCCAAAGAtgaaagaagccattgtagtgcaatgtttacattttt ggaaagttctaAAATGGTAGAAGAAGCTCTGTAAATAAAAATTAGACTCT TTTACGTGTTGTGTCGTTCACCACGTTGAGTTGAATTGGTTGGTTATATT TTAAAGGCTTGATTCATACTTTTGCTTTGATACATTTGATTCTCAATATC AACGTCATACTTTGAAGTTCTGTTTATCCTCTCAGTTAGTATATTTTAAG TTCACCTCTGATTGGATATATAAACACTGCCTCGAAAGACAACAGGAAAC ATATGATTATGAATGAAGGGTAGTGTTTTATAGGTAGTAGAACCTAGAGG TGccttgtttttcatttgtttcatacTTCAATTGGTAATTTTAGTGATTG CTAAAGTATTTGGAGAAGCATTTGCTCTCTGACTGGATGAGGTGCTCTGC ATTGTGGTGGTGGCGCACAAAcaatttttagtaaaaaaaccATTCCTTTC ATCTTTTAGtgaatagaaaaagaaagtagcATTACATGAATCAAAATGAC AGAAATGGTTATCATGCCAACAGATGAACGTATCCCACCGATGGGATCAG AAGCTGCAGATACACACTTCAATGAAACTGCTGCATACGATCCTAAATTA AATACAAGAGACTTATCACATAATAATAACAAACAATGTATTCCTCATTA CGAACATTGGAAGGACAGCTTACCAGATCTATTAGATGACACAGAaggat ataaattattttacgAATTTCTAGAGCAAGATAAAAGTATCACGTTATTT GAATGTTGGTATTGCTGCAATCAATATCGTAACTTGCCACCAACTAGAAC TAGTGCCAAAGACATTTATCATAGATTTGTAAAGAAAAAGGACCCACATA TTCCAATTTCTGAtcaagcaagaaataatttggtATTGAGGATAAAGGCT AACGATATTACAGAAAAAATTTATGAGGAAATTGAAAAGGAAGTTTACAC TAATTTAAGGGACAtttgttatccaaaatttttaaaatcagactGTTTTA ATCAATATTGCGAAAGTTCTGGTCAAATGCGGTATGCAGAATATAATACC GATTATGGAAAGCCATCAACAAAATATAGTGGAGTCCTTGATCACATTGA CAAGCATGACCAGTATCAACCTCAATCAAGATCAGAGTAAGTATACCTTG TTTAATAAACAATTTTTGGAAGGTTCAAGGCTCCAATTACATCCATTAGA GTTTCTTCTCATTGATATAAAGTCAGGAGGAATCAGAGAAATTGTAATAC AATAGGGATGAGCATACACCTTTTCTTATAACAACAATTTACAGAAAATG TGACTCAGTCTCATTTGTTATTGCAACAgaatttcagcctgaaatgaaaa aataactaGCTAGAGGCACATTCTAAATTTCATGGTTTTCACAAAAAGAA ATCTgcatcatgaatatttttgaattaagaagaccagatattttcaaaaa tatcaatatgaCAACAAGTTGCATACTTTGCAATCTTTATAATCAAAACA GCATTCCTTTTCTTTGAAGAATACAACATTGATATTCTGTAATTTCCTTG CTTTTATACAGATCTAATAGCTTTTCACGACGGTGCCTGAGGATGTAAAG AGAGACTACATTGATTCCTCTCATAGCAGGAGAACACTTTAGTTTATATA AGGACAGTAatgtttttaaggttttttaagaattcttttaaactggcacc tttaaaactttattttccAGGATGTTTTACTTTTAAGCTTTATTCTATGA TGATTGCTTTgaatttatgttgttttttgaaCTGTTCTCTTTCTCAATCT TCAAAAGCTTACGACGCCATTGTTTCATAGAGAGATCAAATTAGTATCAA TTATGAGCAAAGCTTCAAAAAGAGATTCGGTTTTTTTTATTGCCGGTATG TAATAatcaaagataaagaaaaaacatagAATAGGATcatgtagaatttt ttttcttttttaccaaATTGCCGTTTCCTTTTCACTGCAATTTTGGCTTA GGGAAAATATGTCGTTACTACAGGTCTAAATGGAACTTTTTTGTTCATGT AATTTCTGATGACTAAAGATTACCATATTCAGAATATTTTTGGTACTAAT AACTTTAGGTACTGAATTTTACAGTATGTAAGGCTTCCTCTTCTAATTGA CAATTCATATATATTTCCAAAAAGATatagaaatgaagaaaataccCTGA GAAGTTGATAATGACAAAATTCCTTTTGAACTATGATATATATAATCATG TTTCATTccctttattttcttatttttcattttttggttatcttttttat ttcagttcaaaatttttcttgaaaatctttttccacAAGTAGATGGTAGA AAGAAAgtttttccttttctctttttttttaatcatcaaaATTCCCCTCT CTATTCAACAATTCCTTTATGTTGTTGTGATACTCAAcgctttatacttt tttttcatattttgcgataatgtctttttcttttcttgtgtCCTACTTGT TTACATTACACACCAATATTTATCAcataaaaggaaagaaaaacttAACC TTGCATTCCGGTGTAATACAGCCCTTAAAGTCGCCTGTCACTACCCTGTT ATACTATTTATCATTTGATGTTATGTTgctgtttctctttttttaatgaa tttttttttcttcccctctatgttatgtttttctttcttttcactcagca taaacgtttcttataagaacaaagtatataagaacattacatttcaaggt aaaaaatattaagaaaattctaagaacattttaaaacactTTACAAACCC TAACATGCAATATCTTAGGAAATTACactaaagcactttgaaatgtTTGC AatttgctgaaaataagaatatttcatattaatgttcttatagaaaTAAC GTGTACAATTTCTCAGTGTGTTTTCCTTTCACGGTTAAAAGCCTCTCTGT ATCGATTGGACCGCTTCCATCAAAAGACTTCGCACTAAATTACATGAAAC TTTGTTTCAATCATAataaaagaacaacaaaaaatatTCCTTGATGGATT GCAGCCACCTCATTATTACAATCAAAACCAATATTAATATACtcctttga aaattaattttaaaaattttccctttttttctctttacagtTATGAAAGG CAGTATGAATGCGCCCGTCATCCACACCACGATCGAGTTCACGGACCCTC ATCCAATTATGACGATCATCATAGCATGCCGTCAGATTATGATCGTAGCT CTATAACAGATTCCAAAACTTCCATGTAAGATTAACTCTAATATTTCTTT TTCGGCATAAATTGGAATCTTATAATGTATATGTCCTTAGTTTTCTGAAA CCATTGGCTATCAGTTCCCAATAGTTTAACCTAATTATTTCCACTTTTTA AATGCCTCTAAAGCCtatgtttttcaaaactctATTTAGTAAAgtacttt ctttttttatttagggGATCAAGTAGTCGACACGGTAGACCGTCTCGAGG TCACAATCGCGATTACGATGGACCAATGGACGTTAACAATTTCAAGCCGg taagattttatttaaaatttcttcattacaAGTCCGAACTTGATTCAAAG TAATCAAAGAACAGTTCTTTTAAACGATAAATCAATGATATAATATAACT GGGAACCTTTGGAATGTTTCTTTAATCTTCGGCAAAAAGAGAGGGATAAG TTGTTGATACAAGCGTAACCCTTGGTTCCCATCTGATCTTATTGTGAGGC TTGAGTAGGTCCCCTGCTGTTCGAACAGACAACATTCGCTTTGGTATGAA ATATTCGATGCTTATTAGCACCCATTTTCGTTGTTTTGTTTCATATTCAG CGTTTTTTTCTAACATTCGTGTCACTGAACTCGAACTCATTAAGAGCAAT AACCTCGTTttcttaaacatttttttttttgtgttattGTTGTCTAGGAT TTTTACTTAGGCTTTATAGTACCGTTCTGTTtcttaaacgtttttttata taataaggACTCATAAACGCCAAATTGCACACAAATTACTCCCAATATGA tggtgaaaattaaaacattttaacaACAATTTCGGCTTAAAACTcataaa gttaagaacatcgagGGCTTAGAAAATTTgtacgttcttataaaaaatca tttatgcCGTGTATTAAGACTTTAAGGTAGCCTGCTGCGAAAGTGGATCA CAgtgcttgttttcaaaaattctctTTGTGTTGGAATTCCCTGTTCTATC TTTTGTATTCTGTGCGTGCCTTATGTTTTTCATCTAACACCGAGAGAgca gaaaaatgtttttataagaactagacAATTTTGGCTGAGGCTGAGACTCG GATGAGGCTGTTTTTATCATTTCGTGATTTTGGttcaaatgtttttgaaa tggtctaaaaaatactttttctagCCATATTTGACAGTTGAGATTGGCAT ATTATTTTTAGGTTATTGATAAAAAtcaagcctcatgttcttataaaaaa cgtgaaaGATAGAGTCACTTTGCTTGTACATAGATGAAAGAGCTCCCTTC ACCGTAAGCTTAATCTTGTTTCTCTGTACGCGCTGATGCGCTTTTCGAAT AAGTCTCGATTTGAATCAACTATAACAATTTTGTCCCCTTTTCTtgagtt ttataagaacaatgtatATTGTAAATAACCGAAGTCAAGTATATTTCCCC CTCCtttttaatgttcttataaagaattgAAGATGTACTATTAGAGCCTT CTCGTAAGGCTAGTACGCTAATGAAATTATATTCAGAAAACATCAAACAG AATAATTTTGTATCCAACACTATACTTCTTAAAACTTttcttaatgtttt ttcttcttaaaaaatcTTACTTGAAAgagatgtttttaaaaatacattGC CGACTCAAGAGACTCAAGACCGCTCTTATATAAGATTACGAGTCCGCAAA AATTGTCTTTACTTGCGTTTTCTTGTTGAACGTAACTGTAGcgcattttt cttctttcttttaccTTATTAAGATTGTCAAAGAACATTTTTCCCGCCCG TCCCGTCCCTTTCATTTTCNAACTGTAGcgcatttttcttctttctttta ccTTATTAAGATTGTCAAAGAACATTTTTCCCGCGCGTCCCGTCCCTTTC ATTTTCATAGCTTTTTCCCAATTCTTTAAACCTCTCTTTACCGAATTTcc tcttttaatttttaaaggaCCTTAAAAGAGAATGCGCTAATATTTCTATT TCTTCGTTTATGACTCtttataaattaaattggatgaGTAAAGAAGTTTT ATTTCTTTCCTGGCCATAAGCCCTTCCAATACTGAAAAGTTCCTTTTGCT AAGTAAACCTAAGCGCTTAGGCCCATAATTCTATATAATACCCATCTAGC ATCAATTTGCTGTGAGATTTTATAGCCATAGCATAACATTTCTtatcttt taaaagattttgtttttatgttaATAAGCTGTAGAAGCTGTCTTGAAACC ATAACAAAATTTGTGTGTCGGTATGTCTTGTGCATTATGAGCCgtgatag aaaaaaataaatctttaaaaaacattgtttcaacgttcaaacTAAATCCA TTAAAAGAcgttccatatttctttttactCAAACACACTCAAAAATATGG TTTTATTTTGCCTGTGATGACTTTTTTACGAATAATTTCATGCTTATACG CAAAAGATTAAGCAGGTTTAGAACCCCCAAAAGTCGCCcgtcttaaaaaa aattgatttctcaattacaaaaaagaaatttgtaacAAGATCTAAATTCG CTAGTCTATTAACAAATTGATATGCCGACTCTTAAAACACGTGCaccttt ttttaagaaatttctcTGCTACGAGAAAAAACCCCtacatattttgtttt tgttatcaAATAGTCGCTCACAAAAACATTATGAAAAATAAGttcaaaaa atgtataatttgatATCGTAAAGTCACTGGGCCGACAAACCGATTTTAAG AACACCGTCATTTTCATAAACAATAATTTTTTGCATCGCATTCTTTTCAT CCTTGTTAAAAACGTTACGGTATTTCTTGCATACCTTTTGGACTTTTCGG AAATTAAACCATATTGATGCAGTTTTCTTGGGaggaaaagtattttttaa acatgGTATCAAACATTGGGGTCAGTCTTTCGATGACTACCATTAGTGTA AGATAAATTTTCTCGTGTAGCTTCCAGACCATAGCAACTGTACTGTAGAC TATAGTTCGTGNGCGACACGGTGGCTCAGAACACGGTTTTTATCCACACA GTAGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAGACCGA TACAATACAATGTCGTCATCATCTCACCAACGTGGTTCCTCGCGCACGCG TGAAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAGTAAAA TTTATTCTTGGATGGAGAAAAANGTGTAGCTTCCAGACCATAGCAACTGT ACTGTAGACTGTAGTTCGTGTCTTTTTGCCGCTGTCTCGTTTCATACATA CAAAACACTTGATGGAGACTACTttgaatataataaaaaaattttccgaa attattttatttcttcttctttctttattATTAGCCTGGTATATAatctc tcttttctttttctcttttaacaGCGTACGCAGCGAATCAATCAAGATCG CATGAAACCGATGAAACCGACAGACTTTGCTGCACTTTTGAcgcaaaaac ttgaaaaagtttTGATCGACCGAACTAGAGATGGCCATGATAATTCGGTA AGTGATTCTATAACAATCCTTATTTCTATCGTATCCTAACCGTATGAACT TCATGGATGAGTGTAAAGAATTCAATGTTTAAACTATATAAATTgtaata aatctttttcaactttttttcaatatatgaCTGTTCACTCTGAAAATTTA CTTCGTTTTAGTTTCATTTCTTTATTTCGAGTTTTGCTGACCTGTCTTAT AtcattcttttcttttataGTCACACCATTCTCATGGTGACTCAATGGAT CTGTCTTCAATGAAACATCATCTACCAGGTGGACACAACAGTCGAGTACC ACCCCACCATCAACCTCACATACACGATTTCGATGGCCAGAGTGAGAGTG ACGCCCAATCTTGGGTGCTCTCTGACCGGCCAAGCGTCGCCGGACAATCA TCACATAGTGGCTCACACAGTggtattttaatgaaaaataaagcaaaaga aCTCAGAGATAAAATTCATCATCATATTCGAAGTGACTTGAAAGAATGTC GTTGTGCTGAGTGCCGCCTCACGCCCTCCGTACATTCGGGCGGTCGTCAC GAACACGATTCGCATGCACGACACGGTGGCTCAGAACATGGTTTTTATCC ACACAGTAGTAATAGTAACTCTTATAATTATTCCAATGATACAATACAAG ACCGATACAATACAATGTCGTCATCATCTCACCATCGTGGTTCCTCGCGC ACGCGTGAAACGCACCCGCATCCAGATGCTGCACCACCATTAGACACTAG TAAAATTTATTCTTGGATGGAGAAAAACGAACGTTACCAACATCAAAAAT CGTACCCAGACCCCTCCCCGTCACCTTCTTTACGTCGAAAGAAAGCACCT ATACAATATAACACAAGTAGGTCACAGAACTCTCAACAGCCTATTGCGCA AGATACGGGCATGCCGTTATTACCACAACCTGACCCAGACAATGTTTTAC AAGAGGTTAAACGGAAACTGGAAGAACCCTCACGATCACAACAAAATCAT CACCGATCTTCaagacaacaacaacaatatcATACGCCCCATTATGAGGG CGGATACCACCCTCATCACGATAATCAATCAATGGCTTCTGCTCCTTGGT CGATGTCTGATAACTCTTCAATTATTTCTTATAACCCTTCACAAGTTTCT ACCGTACCTTCATCTGCGTCTAGATTATGGAACGCTCAAGGTTATTACAA AGATGCCGGTAGTGAAGTCAGAGACGATCGTTGCACGCCTAGCGAAGTTC ACTCGCAAGCAGCTTCTAAACACAGCGGTCCGCGTAGCGTGACACGTAGT GATCATATGAGCGCTGCACGCAGTGATCATCACAGTGACGTAAGATCACA ATCGACGGGAATTAGTTACGGCAGTGACGGTAGTAAAGGACGTTCTTCTT CttctaaaaataaaactgtTATCACGTATTATTACGGTAGTGAACCTATC CCGTACCGTATTAGCGTTCCGACTACGGAGGTTACGTTGTCACAATTCAA ACTCGAAACCAAACGTGGTAATTATCGCTTTTTTTTCAAGACTGTTTCCA GTGTCGATGGTGAGGTTGTTTGGGAAGAATTCAAAAACGATGATGATGTC CTACCTAAATTTAATGATAAAATTGTTGGCAAAGTCGATAAGATCTAATT GACTTTGGTTTTTGGATTTATTTGTTGTTATTGTTTGGATTATTTCTCTT AATGATAATCATGACGGAATTGTTGTTAATGTGGACCAAGTTTTGATTCT ACCATAATGAACTTATaatatttatgacgtaatgttttaaacAGAAGCAC CCTAAAAGACCAAACAGCCGGTCTAATTTTGAATTAAACAATAAACTAGG CCCTGGCTATTTTGGGTGCTTGCGTCTGAAAAATTCCGACATGAATGATT GATCATGAATTGATAAATgcgttgtttttttatatagaTCCTCGTGTTaa tgattacgtcatgaatattattGTCCGCTTGGTTATATTATCactgtctt ttttttttcaaatttatgctCTGCATTTAAAACTTTATCACTATTTATAT TTTGCCAATTCTTCTACCCCTGTTTGATACCCCTAAatatttgttcaatt ttttaccTTCCTCGTACAGGTTCGGGAatcgaaattcattttgacaaatt tgaactttttgccaAGTGTCAAGATATTCTTTCCTTGCTTACTCTTGGCT TTACCTTTCCAACTTTCTTCCTTTTTCCTTTTATATTCCttcctaaattt tttaaaatagatattttacaattttctccCTTTAAGTTAATATACAATAT ACTGAAaagagttttattttttactagATTTATCTTACTACCCCATGATT GTATGATATTTTAAGATAAACCCCGAAATATACCCCTTTATAATTACACC CCAATATtgtgaaaaaatgaaataatatcaaaaaatacaacaaaaggaaa aatgtgaaaattaacaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011804XLOC_011804Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00021041-exon-sc0000377-1491911889:136648..136834TCONS_00021041-exon-sc0000377-1491911889:136648..136834Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:136648..136834TCONS_00021041-exon-sc0000377-1510915933:136648..136834Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:136648..136834TCONS_00021041-exon-sc0000377-1575043694:136648..136834Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:137069..137161TCONS_00021041-exon-sc0000377-1491911889:137069..137161Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:137069..137161TCONS_00021041-exon-sc0000377-1510915933:137069..137161Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:137069..137161TCONS_00021041-exon-sc0000377-1575043694:137069..137161Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:140588..141833TCONS_00021041-exon-sc0000377-1491911889:140588..141833Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:140588..141833TCONS_00021041-exon-sc0000377-1510915933:140588..141833Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:140588..141833TCONS_00021041-exon-sc0000377-1575043694:140588..141833Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:143838..143972TCONS_00021041-exon-sc0000377-1491911889:143838..143972Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:143838..143972TCONS_00021041-exon-sc0000377-1510915933:143838..143972Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:143838..143972TCONS_00021041-exon-sc0000377-1575043694:143838..143972Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:144162..144246TCONS_00021041-exon-sc0000377-1491911889:144162..144246Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:144162..144246TCONS_00021041-exon-sc0000377-1510915933:144162..144246Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:144162..144246TCONS_00021041-exon-sc0000377-1575043694:144162..144246Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:147372..147494TCONS_00021041-exon-sc0000377-1491911889:147372..147494Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:147372..147494TCONS_00021041-exon-sc0000377-1510915933:147372..147494Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:147372..147494TCONS_00021041-exon-sc0000377-1575043694:147372..147494Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1491911889:147718..149964TCONS_00021041-exon-sc0000377-1491911889:147718..149964Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1510915933:147718..149964TCONS_00021041-exon-sc0000377-1510915933:147718..149964Clytia hemisphaericaexon
TCONS_00021041-exon-sc0000377-1575043694:147718..149964TCONS_00021041-exon-sc0000377-1575043694:147718..149964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000377supercontigsc0000377:136648..149964 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.854724 1.13032 2.02511 1.44391 1.4894 0.825699 0.303632 1.01941 0.230144 0 0 0 0.917356 8.44824e-06 0 0.389573 0 0 0 0 0.113929 0.161769 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021041 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top