TCONS_00020994 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020994
Unique NameTCONS_00020994
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020994 ID=TCONS_00020994|Name=TCONS_00020994|organism=Clytia hemisphaerica|type=transcript|length=1850bp
ACTAagattaaaatgaaaattaggaagaaaataccgttaaaaaaaataca
atagttTCTTTatctattccaaaaaaaattatcatttgattgaattttga
taatttttcattttaatttcgttttttaGATATTTGTCACTTGTGGTTTT
ACTTGTATGAGCAACGGTATCCATGAGCTGTGGAGCTGAACAAGGAACAA
GGATATGCACTGGCAAACATGTTTCTACgctatttttttgatttggtgCA
TTTCATTGTTACCAGGAAATAAAAGTGAAGATTTGAAACGAAAGAAAAGa
gaaagtaaaaaatcaaatggCTACCCTAACCTATCATCATTTCCGACCAA
CTTCTTTACGGAGACGTACAAAAAATTTGTCAATAATCGCCCGATCATTG
GAATAATTCCGATGCCCATGGATGGCGATAAACTCTTAGTTGAAAATCCA
ACTGCATATCTTAAAGAATACTTTGGTGGTTCATTTGTCAAGCTGATTGA
AATGGGTGGAGGAAAAGCTATCCCATTGACAGAGGATCTCATGTTCAACA
AGAGAAAATTACGAAAGCTACTGAAAAGCATTAATGGTGTTCTTATCCCT
GGAGGAGATGGAGACCTGGCAGATTCTGGTTTTAGCATCATTTCTCAAGA
AGTTGTTGAATATTCAAGAAAACAAGCCAAAAAGGGAATCCCTTATCCTG
TCCTAGGAATTTGTCGTGGCTCACAGATGATCATGCAGTTAGGAAGTGAA
GAAGAAATTTTAAGACCTTCTGACTCCAGTAATCTCACTCTTCCTCTTAC
ATTGACAAAGGATGCAAGGGATTCGCAAATCTTTGGACATGCTACGGAGG
ATTTACTACGAGTGGTTCAGGAAAAACCCATAACTTTCAATGCACATATT
TATAGTGTTTTGTACGAGACGTTTGAACAACATCCTGAATTGCAAAAACA
ATTTCGTGTCACCTCCACCAATTTTGATCGAAGAGGGATCAAATTCATTA
GCACATACGAAGACAAATTCGCTCCAATCTTTGGACTTCAATGGCATCca
gaaaaatctttgtttgtgcATAACCCTGTACAGGCTGTTGATCATTCAAT
ATTTGCTATCGCTGTTGCTCAATATATCTCAAATGTTTTCATGGGTTTTG
CCAGACAGAATCCGAACCAATTCAAGACGCGCCGAGAGGAAGAGAAGCAT
TTAATTTACAACACTCTTCCACTTTACGTTGGAAATGTAACAGAGACTCC
TTATGAACAAATCTATATGTTCCCATTGTTTTCTCCCAAGCTGGTCAATC
GGAAAGTTAAAATTCCCCTACAAAGATAGACAATGAAAAGTTGCATcata
tttagaaaatttcatcCCAAATCTGTATGAAAATcaacctgggcagattc
tctAAAAAAGCCATGGCCTATAGGGTGAATACACGCCACTCCACACGGAG
TATCAGAATCTACTCGGaggaatttttttattgtttattatgtttttgtt
tttttttgttttcaattgttttcaagaatttattcTTCTAGACCATTGAG
CATAAACATGTTTTCTCTTCGGTTTGAACCAGACTCTCTGTCTGTTTGCT
GTATTTCTTAGTACCATGGTAATTCCTAGTACCATTCGAAATCATGTCTC
GTCCCAGGCCTTTAGTTTTTGGGTTTTCCACTTAATTTTGGAAGACTTGA
TCACTTGTTTTTACGGTTGATTGAACATCTtttgaataatgaaaaaataa
atttaaaaaagggggagtttctaaacatcgaccagaaatggcgaccacga
ccggcgaccacgaccggcgaccagataattttgggttatcgagtttacct
Run BLAST on NCBI

protein sequence of TCONS_00020994-protein

>TCONS_00020994-protein ID=TCONS_00020994-protein|Name=TCONS_00020994-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MHWQTCFYAIFLIWCISLLPGNKSEDLKRKKRESKKSNGYPNLSSFPTNF
FTETYKKFVNNRPIIGIIPMPMDGDKLLVENPTAYLKEYFGGSFVKLIEM
GGGKAIPLTEDLMFNKRKLRKLLKSINGVLIPGGDGDLADSGFSIISQEV
VEYSRKQAKKGIPYPVLGICRGSQMIMQLGSEEEILRPSDSSNLTLPLTL
TKDARDSQIFGHATEDLLRVVQEKPITFNAHIYSVLYETFEQHPELQKQF
RVTSTNFDRRGIKFISTYEDKFAPIFGLQWHPEKSLFVHNPVQAVDHSIF
AIAVAQYISNVFMGFARQNPNQFKTRREEEKHLIYNTLPLYVGNVTETPY
EQIYMFPLFSPKLVNRKVKIPLQR
Run BLAST on NCBI

transcript from alignment at sc0000376:26371..30369-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020994 ID=TCONS_00020994|Name=TCONS_00020994|organism=Clytia hemisphaerica|type=transcript|length=3999bp|location=Sequence derived from alignment at sc0000376:26371..30369- (Clytia hemisphaerica)
ACTAAGATTAAAATGAAAATTAGGAAGAAAATACCGTTAAAAAAAATACA
ATAGTTTCTTTATCTATTCCAAAAAAAATTATCATTTGATTGAATTTTGA
TAATTTTTCATTTTAATTTCGTTTTTTAGATATTTGTCACTTGTGGTTTT
ACTTGTATGAGCAACGGTATCCATGAGCTGTGGAGCTGAACAAGGAACAA
GGATATGCACTGGCAAACATGTTTCTACGCTATTTTTTTGATTTGGTGCA
TTTCATTGTTACCAGGAAATAAAAGTGAAGATTTGAAACGAAAGAAAAGG
TAAATATTTGTTTTATACAAAACTTCCTCGTTTGAAAGAAATTACACGGA
GCAGACTTTAGTTTCAAAGACTAGAGCATTTGGCAGAGAATGTTTTAACT
CAGTAAAGGTAAAGCAAACAAGACCAAGTCTAAGATTTTTAGTGATTTAC
CTCCTGACATTACTAGATTTGCCCTCCTACGGAGCTTTGTTTTACCACGG
GAAAAGCATCACCCGACCCCAGGACACCCAAAATTATCCCCAAAAAACGT
ATATTTACCCCCGTCGAAAAAGAAAAATTTCGACGAAGAGTCACCCGCCC
TCTCACATCCCACCCCTAATATATGCCCTCAACTTCCTTTTTATTTTAAC
TATTTTCATTAAATTGTGTTAATTCTACTTCTAGAGAAAGTAAAAAATCA
AATGGCTACCCTAACCTATCATCATTTCCGACCAACTTCTTTACGGAGAC
GTACAAAAAATTTGTCAATAATCGCCCGATCATTGGAATAATTCCGATGC
CCATGGATGGCGATAAACTCTTAGTTGAAAATCCAACTGCATATCTTAAA
GAATACTTTGGTGGTTCATTTGTCAAGCTGATTGAAATGGGTGGAGGAAA
AGCTATCCCATTGACAGAGGTATTTCATTATTCAGTAAATCTTAGAACCG
GTTTACCAAGAAAATACCGAACTAAAATATCAAATAGGACACTCGGGACA
CTCCAGAAAATCAATGCAAAATACTTTTGAGAATCTCAGTGATGGGTGGA
AGCCACGGCATTTTTCATACCAACTTTGACAAGAACTCAAAATAATGTTA
CTGGCGTCTTGTGATGATTTTTTCAACAAAAGGACAGATTCTACTTTCGA
AATCTGTGTAATTATTCAGTCTGTTAGTTTTACAACCGGGCTGGACCATC
GGAAAATTGAATCGATAAAAAAAAGTGCGGTAAAAAGATTAAAGTAGATT
CTATTTATTGGCTATACAAGACAGAAAAATGAAATAACTTTGAATTTCTG
ACCTGGAACCTAAAAGTTATAAAAACAGGCTCTCAAAAATTTATCAAAAA
CAATAGATTTTGCTTTAAGGGCTCTGACCATAGTCAGAAAATTGATTTTA
GTATCTGAACATAAAAGTTATGTTTTAGATTCTTTAACACTTTTAACAAA
GAATTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTTTTAATCAAATCCCTTAAGAGTAATTAAGAACTTAA
TTGCAAAAATGACGTTATGAACTTTAAAAAGACGTTAATAATATGTTGCA
TCACCTTCTTTTATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTT
TGTTTCGAACTTTTTTCAAGCTGTCCGCAAAGAATTGAACTATTTTAGAT
TTTGCGGAAAATTTTTCTAAAAAGATGTGTCAAAAGTTATGACTGTTTTT
TTTAAGCAAAATCCAGATGAAAAATTGATGAAAAACCACTATTTTGAAAA
TTTTGAGACAAAGAAGCATTTACAAAAATTTTCCGCAAAAATTTTTATTG
TTCGGTAAAAGATACACCATCTACTGCGAAATTGTTTTCAAAATGTTTTT
TCTTCGCCGAAACTAAGCTCTTCAAAGTTGAAATACTTTTCCTCGAAAAA
GTCTTCATTTTCTTCTTCATCAAACTTTTCCAATGCAATTTTTGAATTTT
CAGATTCAGGAATAGTTTGTCTAACAGAAAATGTATAACATGCCATTGTT
TTGTTGGTTACATCAGTCAGAAAACACATTTTAAACAAGGCAATTATGAA
AAATTCACTATGGTCAGAGCCCTTAATCAAGATAAGGAAAGATTTTGGAA
AAAAACTTTGCGAAAGTTTTATATTGCAATGCAATTCAGGTTTTTCTCAA
ATCTTAGAATCCCATGTAAAGACGTTTTTAGAACTACAGCAATACACACA
CAATCATAATACTATCGTCTTCCCTTTTGTTTTGTAGGATCTCATGTTCA
ACAAGAGAAAATTACGAAAGCTACTGAAAAGCATTAATGGTGTTCTTATC
CCTGGAGGAGATGGAGACCTGGCAGATTCTGGTTTTAGCATCATTTCTCA
AGAAGTTGTTGAATATTCAAGAAAACAAGCCAAAAAGGGAATCCCTTATC
CTGTCCTAGGAATTTGTCGTGGCTCACAGATGATCATGCAGTTAGGAAGT
GAAGAAGAAATTTTAAGACCTTCTGACTCCAGTAATCTCACTCTTCCTCT
TACATTGACAAAGGATGCAAGGGATTCGCAAATCTTTGGACATGCTACGG
AGGATTTACTACGAGTGGTTCAGGAAAAACCCATAACTTTCAATGCACAT
ATTTATAGTGTTTTGTACGAGACGTTTGAACAACATCCTGAATTGCAAAA
ACAATTTCGTGTCACCTCCACCAATTTTGATCGAAGAGGGATCAAATTCA
TTAGCACATACGAAGGTATTGGTAATTTTTTATATAAAGCGAAATTCTGT
TTGTATTTTATATTTTTGTGTTTCACCCTTTTGACCCTTTTGTGTCTTGT
CCTTTCAATAATGCCTGGTGTATATTTTAGAGAATCCATCTTTTTCTGAA
ATTAAAACCCCACGTTAAAAATGATCACAGTATTTTATAAAATCCATCCA
AACTTTTGTTTTAAAGATTTTCACAGTCTCTGTCTTTGTTGCTCGGAAAG
CTTGATGCATCAAAAGTTTTCTAGTCCTCAGATAGTTAGTTCATTTTTAT
TTCCATTTCAGACAAATTCGCTCCAATCTTTGGACTTCAATGGCATCCAG
AAAAATCTTTGTTTGTGCATAACCCTGTACAGGCTGTTGATCATTCAATA
TTTGCTATCGCTGTTGCTCAATATATCTCAAATGTTTTCATGGGTTTTGC
CAGACAGAATCCGAACCAATTCAAGACGCGCCGAGAGGAAGAGAAGCATT
TAATTTACAACACTCTTCCACTTTACGTTGGAAATGTAACAGAGACTCCT
TATGAACAAATCTATATGTTCCCATTGTTTTCTCCCAAGCTGGTCAATCG
GAAAGTTAAAATTCCCCTACAAAGATAGACAATGAAAAGTTGCATCATAT
TTAGAAAATTTCATCCCAAATCTGTATGAAAATCAACCTGGGCAGATTCT
CTAAAAAAGCCATGGCCTATAGGGTGAATACACGCCACTCCACACGGAGT
ATCAGAATCTACTCGGAGGAATTTTTTTATTGTTTATTATGTTTTTGTTT
TTTTTTGTTTTCAATTGTTTTCAAGAATTTATTCTTCTAGACCATTGAGC
ATAAACATGTTTTCTCTTCGGTTTGAACCAGACTCTCTGTCTGTTTGCTG
TATTTCTTAGTACCATGGTAATTCCTAGTACCATTCGAAATCATGTCTCG
TCCCAGGCCTTTAGTTTTTGGGTTTTCCACTTAATTTTGGAAGACTTGAT
CACTTGTTTTTACGGTTGATTGAACATCTTTTGAATAATGAAAAAATAAA
TTTAAAAAAGGGGGAGTTTCTAAACATCGACCAGAAATGGCGACCACGAC
CGGCGACCACGACCGGCGACCAGATAATTTTGGGTTATCGAGTTTACCT

Coding sequence (CDS) from alignment at sc0000376:26371..30369-

>TCONS_00020994 ID=TCONS_00020994|Name=TCONS_00020994|organism=Clytia hemisphaerica|type=CDS|length=4500bp|location=Sequence derived from alignment at sc0000376:26371..30369- (Clytia hemisphaerica)
ACAAATTCGCTCCAATCTTTGGACTTCAATGGCATCCAGAAAAATCTTTG
TTTGTGCATAACCCTGTACAGGCTGTTGATCATTCAATATTTGCTATCGC
TGTTGCTCAATATATCTCAAATGTTTTCATGGGTTTTGCCAGACAGAATC
CGAACCAATTCAAGACGCGCCGAGAGGAAGAGAAGCATTTAATTTACAAC
ACTCTTCCACTTTACGTTGGAAATGTAACAGAGACTCCTTATGAACAAAT
CTATATGTTCCCATTGTTTTCTCCCAAGCTGGTCAATCGGAAAGTTAAAA
TTCCCCTACAAAGATAGGATCTCATGTTCAACAAGAGAAAATTACGAAAG
CTACTGAAAAGCATTAATGGTGTTCTTATCCCTGGAGGAGATGGAGACCT
GGCAGATTCTGGTTTTAGCATCATTTCTCAAGAAGTTGTTGAATATTCAA
GAAAACAAGCCAAAAAGGGAATCCCTTATCCTGTCCTAGGAATTTGTCGT
GGCTCACAGATGATCATGCAGTTAGGAAGTGAAGAAGAAATTTTAAGACC
TTCTGACTCCAGTAATCTCACTCTTCCTCTTACATTGACAAAGGATGCAA
GGGATTCGCAAATCTTTGGACATGCTACGGAGGATTTACTACGAGTGGTT
CAGGAAAAACCCATAACTTTCAATGCACATATTTATAGTGTTTTGTACGA
GACGTTTGAACAACATCCTGAATTGCAAAAACAATTTCGTGTCACCTCCA
CCAATTTTGATCGAAGAGGGATCAAATTCATTAGCACATACGAAGAGAAA
GTAAAAAATCAAATGGCTACCCTAACCTATCATCATTTCCGACCAACTTC
TTTACGGAGACGTACAAAAAATTTGTCAATAATCGCCCGATCATTGGAAT
AATTCCGATGCCCATGGATGGCGATAAACTCTTAGTTGAAAATCCAACTG
CATATCTTAAAGAATACTTTGGTGGTTCATTTGTCAAGCTGATTGAAATG
GGTGGAGGAAAAGCTATCCCATTGACAGAGATGCACTGGCAAACATGTTT
CTACGCTATTTTTTTGATTTGGTGCATTTCATTGTTACCAGGAAATAAAA
GTGAAGATTTGAAACGAAAGAAAAGACAAATTCGCTCCAATCTTTGGACT
TCAATGGCATCCAGAAAAATCTTTGTTTGTGCATAACCCTGTACAGGCTG
TTGATCATTCAATATTTGCTATCGCTGTTGCTCAATATATCTCAAATGTT
TTCATGGGTTTTGCCAGACAGAATCCGAACCAATTCAAGACGCGCCGAGA
GGAAGAGAAGCATTTAATTTACAACACTCTTCCACTTTACGTTGGAAATG
TAACAGAGACTCCTTATGAACAAATCTATATGTTCCCATTGTTTTCTCCC
AAGCTGGTCAATCGGAAAGTTAAAATTCCCCTACAAAGATAGGATCTCAT
GTTCAACAAGAGAAAATTACGAAAGCTACTGAAAAGCATTAATGGTGTTC
TTATCCCTGGAGGAGATGGAGACCTGGCAGATTCTGGTTTTAGCATCATT
TCTCAAGAAGTTGTTGAATATTCAAGAAAACAAGCCAAAAAGGGAATCCC
TTATCCTGTCCTAGGAATTTGTCGTGGCTCACAGATGATCATGCAGTTAG
GAAGTGAAGAAGAAATTTTAAGACCTTCTGACTCCAGTAATCTCACTCTT
CCTCTTACATTGACAAAGGATGCAAGGGATTCGCAAATCTTTGGACATGC
TACGGAGGATTTACTACGAGTGGTTCAGGAAAAACCCATAACTTTCAATG
CACATATTTATAGTGTTTTGTACGAGACGTTTGAACAACATCCTGAATTG
CAAAAACAATTTCGTGTCACCTCCACCAATTTTGATCGAAGAGGGATCAA
ATTCATTAGCACATACGAAGAGAAAGTAAAAAATCAAATGGCTACCCTAA
CCTATCATCATTTCCGACCAACTTCTTTACGGAGACGTACAAAAAATTTG
TCAATAATCGCCCGATCATTGGAATAATTCCGATGCCCATGGATGGCGAT
AAACTCTTAGTTGAAAATCCAACTGCATATCTTAAAGAATACTTTGGTGG
TTCATTTGTCAAGCTGATTGAAATGGGTGGAGGAAAAGCTATCCCATTGA
CAGAGATGCACTGGCAAACATGTTTCTACGCTATTTTTTTGATTTGGTGC
ATTTCATTGTTACCAGGAAATAAAAGTGAAGATTTGAAACGAAAGAAAAG
ACAAATTCGCTCCAATCTTTGGACTTCAATGGCATCCAGAAAAATCTTTG
TTTGTGCATAACCCTGTACAGGCTGTTGATCATTCAATATTTGCTATCGC
TGTTGCTCAATATATCTCAAATGTTTTCATGGGTTTTGCCAGACAGAATC
CGAACCAATTCAAGACGCGCCGAGAGGAAGAGAAGCATTTAATTTACAAC
ACTCTTCCACTTTACGTTGGAAATGTAACAGAGACTCCTTATGAACAAAT
CTATATGTTCCCATTGTTTTCTCCCAAGCTGGTCAATCGGAAAGTTAAAA
TTCCCCTACAAAGATAGGATCTCATGTTCAACAAGAGAAAATTACGAAAG
CTACTGAAAAGCATTAATGGTGTTCTTATCCCTGGAGGAGATGGAGACCT
GGCAGATTCTGGTTTTAGCATCATTTCTCAAGAAGTTGTTGAATATTCAA
GAAAACAAGCCAAAAAGGGAATCCCTTATCCTGTCCTAGGAATTTGTCGT
GGCTCACAGATGATCATGCAGTTAGGAAGTGAAGAAGAAATTTTAAGACC
TTCTGACTCCAGTAATCTCACTCTTCCTCTTACATTGACAAAGGATGCAA
GGGATTCGCAAATCTTTGGACATGCTACGGAGGATTTACTACGAGTGGTT
CAGGAAAAACCCATAACTTTCAATGCACATATTTATAGTGTTTTGTACGA
GACGTTTGAACAACATCCTGAATTGCAAAAACAATTTCGTGTCACCTCCA
CCAATTTTGATCGAAGAGGGATCAAATTCATTAGCACATACGAAGAGAAA
GTAAAAAATCAAATGGCTACCCTAACCTATCATCATTTCCGACCAACTTC
TTTACGGAGACGTACAAAAAATTTGTCAATAATCGCCCGATCATTGGAAT
AATTCCGATGCCCATGGATGGCGATAAACTCTTAGTTGAAAATCCAACTG
CATATCTTAAAGAATACTTTGGTGGTTCATTTGTCAAGCTGATTGAAATG
GGTGGAGGAAAAGCTATCCCATTGACAGAGATGCACTGGCAAACATGTTT
CTACGCTATTTTTTTGATTTGGTGCATTTCATTGTTACCAGGAAATAAAA
GTGAAGATTTGAAACGAAAGAAAAGACAAATTCGCTCCAATCTTTGGACT
TCAATGGCATCCAGAAAAATCTTTGTTTGTGCATAACCCTGTACAGGCTG
TTGATCATTCAATATTTGCTATCGCTGTTGCTCAATATATCTCAAATGTT
TTCATGGGTTTTGCCAGACAGAATCCGAACCAATTCAAGACGCGCCGAGA
GGAAGAGAAGCATTTAATTTACAACACTCTTCCACTTTACGTTGGAAATG
TAACAGAGACTCCTTATGAACAAATCTATATGTTCCCATTGTTTTCTCCC
AAGCTGGTCAATCGGAAAGTTAAAATTCCCCTACAAAGATAGGATCTCAT
GTTCAACAAGAGAAAATTACGAAAGCTACTGAAAAGCATTAATGGTGTTC
TTATCCCTGGAGGAGATGGAGACCTGGCAGATTCTGGTTTTAGCATCATT
TCTCAAGAAGTTGTTGAATATTCAAGAAAACAAGCCAAAAAGGGAATCCC
TTATCCTGTCCTAGGAATTTGTCGTGGCTCACAGATGATCATGCAGTTAG
GAAGTGAAGAAGAAATTTTAAGACCTTCTGACTCCAGTAATCTCACTCTT
CCTCTTACATTGACAAAGGATGCAAGGGATTCGCAAATCTTTGGACATGC
TACGGAGGATTTACTACGAGTGGTTCAGGAAAAACCCATAACTTTCAATG
CACATATTTATAGTGTTTTGTACGAGACGTTTGAACAACATCCTGAATTG
CAAAAACAATTTCGTGTCACCTCCACCAATTTTGATCGAAGAGGGATCAA
ATTCATTAGCACATACGAAGAGAAAGTAAAAAATCAAATGGCTACCCTAA
CCTATCATCATTTCCGACCAACTTCTTTACGGAGACGTACAAAAAATTTG
TCAATAATCGCCCGATCATTGGAATAATTCCGATGCCCATGGATGGCGAT
AAACTCTTAGTTGAAAATCCAACTGCATATCTTAAAGAATACTTTGGTGG
TTCATTTGTCAAGCTGATTGAAATGGGTGGAGGAAAAGCTATCCCATTGA
CAGAGATGCACTGGCAAACATGTTTCTACGCTATTTTTTTGATTTGGTGC
ATTTCATTGTTACCAGGAAATAAAAGTGAAGATTTGAAACGAAAGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011775XLOC_011775Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020994-exon-sc0000376-1575043694:30071..30369TCONS_00020994-exon-sc0000376-1575043694:30071..30369Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1575043694:29451..29685TCONS_00020994-exon-sc0000376-1575043694:29451..29685Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1575043694:27505..27982TCONS_00020994-exon-sc0000376-1575043694:27505..27982Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1575043694:26371..27208TCONS_00020994-exon-sc0000376-1575043694:26371..27208Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1510915933:30071..30369TCONS_00020994-exon-sc0000376-1510915933:30071..30369Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1510915933:29451..29685TCONS_00020994-exon-sc0000376-1510915933:29451..29685Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1510915933:27505..27982TCONS_00020994-exon-sc0000376-1510915933:27505..27982Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1510915933:26371..27208TCONS_00020994-exon-sc0000376-1510915933:26371..27208Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1491911889:30071..30369TCONS_00020994-exon-sc0000376-1491911889:30071..30369Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1491911889:29451..29685TCONS_00020994-exon-sc0000376-1491911889:29451..29685Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1491911889:27505..27982TCONS_00020994-exon-sc0000376-1491911889:27505..27982Clytia hemisphaericaexon
TCONS_00020994-exon-sc0000376-1491911889:26371..27208TCONS_00020994-exon-sc0000376-1491911889:26371..27208Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020994-proteinTCONS_00020994-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:26371..30369 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.532862	0.401699	0.318585	0.0536851	1.11205	1.04121	2.28204	2.3738	2.64255	1.80603	9.47213	9.51418	14.6099	10.2154	28.0092	57.4094	13.9871	14.8151	1.33379	1.58994	8.18677	7.41978	7.74131	6.65904	11.5064	13.5624	0.678395	0.506203	1.58173	1.0065
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029062Class_I_gatase-like
IPR011697Peptidase_C26
IPR015527Pept_C26_g-glut_hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
GO:0008242omega peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006541glutamine metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006541 glutamine metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008242 omega peptidase activity
Blast
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BLAST of TCONS_00020994 vs. Swiss-Prot (Human)
Match: GGH (Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 2.096e-46
Identity = 93/272 (34.19%), Postives = 154/272 (56.62%), Query Frame = 1 
Query:  457 YLKEYFGGSFVKLIEMGGGKAIPLTEDLMFNKRKLRKLLKSINGVLIPGGDGDLADSGFSIISQEVVEYSRKQAKKGIPYPVLGICRGSQMIMQLGSEEEILRPSDSSNLTLPLTLTKDARDSQIFGHATEDLLRVVQEKPITFNAHIYSVLYETFEQHPELQKQFRVTSTNFDRRGIKFISTYEDKFAPIFGLQWHPEKSLFVHNPVQAVDHSIFAIAVAQYISNVFMGFARQNPNQFKTRREEEKHLIYNTLPLYVGNVTETPYEQIYMF 1272
            Y + Y   S+VK +E  G + +P+  DL   ++    L KSING+L PGG  DL  S ++ +++     S +    G  +PV G C G + +  L S E +L  +D+ ++ +PL  T     S++F +   +LL  +  +P+T N H +S+  + F  + +L+K F V +TN D + I+FIST E    P++G+QWHPEK+ +    +  + H+  A+  A Y++  F+  AR+N + FK+  EEEK LIY   P+Y GN++   ++Q Y+F
Sbjct:   51 YGRYYIAASYVKYLESAGARVVPVRLDL--TEKDYEILFKSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGK-IEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISS--FQQCYIF 317
The following BLAST results are available for this feature:
BLAST of TCONS_00020994 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GGH2.096e-4634.19Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE... [more]
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