TCONS_00020947 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020947
Unique NameTCONS_00020947
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2792

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020947 ID=TCONS_00020947|Name=TCONS_00020947|organism=Clytia hemisphaerica|type=transcript|length=2792bp
CTGTCTAGCGTATATGGCGATGGGGGAGACGAAATGGAGGCGCAAATTCT
TGATGTCAAAATCAACGATCTAGCGCCTGGCAGTGTAATCGCTAACTTCA
CTATCAATTTTGCAAGCTTGGATCAagatcaatttttatttttccaagat
GTTGTGGAGGTGTACAATGCACTTGGGAAATTGGAGATTGTCCAGAATGA
GAATGTATCGTTGAATATTGGCCCTGATTTATTGACCGTACCACCTCAAA
ACGTTACTGCATTTTCGCCGTCTCCGGAAATTCTGTCAATTTCATGGAAC
GCTCTCAACCAATCAAATGTTGACACCTACATCATCTTTTATcgtgaaaa
attactttcaaatcaACCCTACTCTACTTATGCTACTGAAAACACTACAG
CTCATTTGACGTGGCTGAAACCAGGGACGGAGTACGTTTTCAGAGTTTTA
GCATTCTCAAATGCAAAAGGAAATGGGATAGCCAGTCCTTTGACTTCAAC
ATGGACTATGGAAACGGTACCCCTGGTTTCACCTTTCAATATCACAGCTT
CGTCTTCTGGACCATTTTCTGTTTATGTCAGTTGGGTTGGAGTTCCTCAA
GAACAAATGAATGGAGTTCCTCTCGGATATCATATTTACGCTTATTTACA
AAACTCTTTGCTACCAACACAAAACGTCTCTTTCGATTTGAGTGGTGTAT
CTTACACGGAGGGATTGGAACCGAGTACGTCATACGTTTTTGAAGTTTGC
GCGTTCAACAGTGCAGGAGATGGTCCGTGTGATAAAGCGAGCGCTCGTAC
TCTGGATTCAGCTCCATCCGCACCACCTGCGAACATTTACATCAGTTCCA
TCAAAACACACACTCAACTAACCGTACACTGGTCTTCACCACCAGCTGAT
CAAATCCATGGTGATCTTTTGTCATACAAAATCAAAGTCTTCCCAATCAA
AAGTGGAGCTAACGTCTATATCAACCCTAAAGTTGATGTTTATGATTTGC
ATCCATCATTAAATAGCCTCACTTTGAAGTTTCTGGATTCAAACACGTTT
TACAATTTTGAAATCATGGCTGTCAATCAATTTGGTGAAGGTGTCAGTGA
CCAAGTAGTCGGAAGAACGTGCCTTTGTCCACCTGTAGTTTCAACAAACT
ATTATCTACTTGCTCCATACTTAACCAAAGATGCCGATGATCAACTCTCT
GGAGTGTTCGGTGAAATATTTCAGAGTGCAATCCAAGCTACATGCGGTGT
GTGTAATTCACCGAACGGACTGATACATTCAAAATTGGATATTTTGCGGA
ACGGCAGAGAAAGTCTTGCTCAGAAGTCATCTGAGTTAAAGATTTTAAAG
GAGGTTGACAAGTTCACAGATTTATCTTTCCCGATAATTGGGAATACATA
TTCGGACGAAATGGTTGGTTATCCGTTTGTTCCACTGGTCGGACACCCAG
GTGTTGTAGCAATTGTCCGAGATAAAAATATCAATGAGATTGTAGTTGAA
ATGATTATGGTCATTTTGGGTATTTATCCATTGCTTGGGTTGAACTTTCT
AATGATGTTGGCAGCAGGATATATTGTGTGGCTTTTGGAAGCTTGCAACA
ATCCTCGTGGGGAAATTGATTTTGCAAAAACTTGGATACTTGGAATTTAC
GAAGGCTGGTATTGGGCTTTCGTCACTCAAGGAACTCATGGataCGGTGA
TTTCACAGTGACAAAATTTCGCGCAAGGTTGTTTGCTGTAGCCTGGGCTC
TAATAGGCTTAGTCATGACGTCATTACTCATTGGAGCCATAGTAACAGCC
TTGACAACGGTAAATGGTGCAGCTCAATTCAAAATTTACGGTAGCGAAGT
TGGAGCTTTGAATGGTTCATTCGAAGAAAAACTTGGACTTTTGAGGAATG
GAAAAGTGAATGAGAAAAGAGCGTACACCACAGTTGCAGAGCTCCGAGAA
GACCTGCTTGCAGAAAAGATCGAAGGAGTGTTGCTAGATGCATACACAGC
TGGAGCGAACGCACATCTCTTCGCAGACGAACGACTCCGCGCGGCCACGA
AATTAGAATACCCGCGGTCGTATGGGTTTGTTTTGTCAGGTGGTTTGAAA
AGTATGGCGGCAGAGTTCAGAAGTTATATCAGATCTGACCAAGAAAGAGT
TTTAAGCGCGTTAATGAACTCTACTGAGCCGATGGGGGTGTCGCCACCAG
CAGAGTTGAAATCGCCTTTCGATCCAGAATCGAGTATTTTAGCAACAGCT
TTGGTTTCCATGACAATAATGATTGTTATTTTTTCAATCCTTGGTTTGTT
ATGGTCACACTATTTGAAgaaattgaaccaaaaaaatGCCACGCTGGATA
ACAAAGATATTTTGAACCAATGCAACGATATGGTGGACGATTTCAAATCC
TCATTGAATGGAAAAATTACAGAGCTGGAAGACAAACACTTTCTACAAAG
AGAGCATTTATTCAAAGATCATCACGGATATAGCGCTACAGATAAACTAC
CCCGTTTTTTAAATAGCAAGCTTCAAAGGAATGTCATTAGACCCGTTCTC
TCAAACAAAGAAGATCAATTAGACGAACAAGGAGAAATTAGGTCTGCAGA
ATATACAGAAGATATCGAAAGTGGGCGTAATTCAGCCGCCTCGGCCAGGG
AAAGCGCCCATGTTGATAAACCATCCACACCAAAGATTGAAGAACCAGAT
TTCGATATAGGTCAATTGGGTAAAACAGAAGAGACCAACATTGAAGCATT
TGAGAATGTGGACTCTGATGACGAGTAGTAGTgaaatcatag
Run BLAST on NCBI

transcript from alignment at sc0000374:85199..92414-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020947 ID=TCONS_00020947|Name=TCONS_00020947|organism=Clytia hemisphaerica|type=transcript|length=7216bp|location=Sequence derived from alignment at sc0000374:85199..92414- (Clytia hemisphaerica)
CTGTCTAGCGTATATGGCGATGGGGGAGACGAAATGGAGGCGCAAATTCT
TGATGTCAAAATCAACGATCTAGCGTAAGATGAAGTATATGAACTATAAA
GATCAAGACTTAAAAAGCTAGGGTTAACAATTTAGAACAGAATATTTTTT
TTACAAAAGTCAAGTGTCCGCTTAAAAAAAATATTTTGGTTATAATACAC
CTTTTCAACCGTAGTCGCGCGAGCATTTCCGCTTTATCCCACTAAAACCG
TCATATTCCTTTTTTCGCACCAATAGACAAAAGAATGCCCGCGCGACTAC
GGTCGAAAAGGTGTATTTGAATAGGAAAAGAATACAATAGACCTTTTCAT
AAATAGACGATATCGGCTTAACTAAATTCTCCCCGAATGATTACCCATGA
TGCATTACGTAAAAAAATTCAGTAAGTCAATATCGTCCGTGAATTTTTTT
GCGCAATGCATCATGGGTAATCATTCGGAAAGCCAATATCGTCTATTTAA
CTAATAATCAGAGGAATAAAGTACGTAATACTCACGTTAGATTCCATTGC
TGAGTAAATGATTGATTCAGCCTGAAATAACATGTAATTCAAATTATTCA
GTTGTNGATATCGTCTATTACATCACGAACATCACTTGCCTCGTTTTCAA
ACAATTACCCTGGTGATTATGTCCTTCGAAACATTAAATGATTTTTTATG
AAAAGGAAGTAGTTTGATGAAATCCGCGGGGAGTTAATCACCATGGCAAT
AATTTCAAAACGTGGGCAAGTGATGTTTGTGATGTAATTTATGAAAAAGG
TCTATTGTATATTTTCCATCAACCAGGACAAGGCAATCGATAACTCAAAA
GGTCACAAAGATAAGAGATTGTTTAAAAATGTGACCCTAATATTTCAATT
TATAGGCCTGGCAGTGTAATCGCTAACTTCACTATCAATTTTGCAAGCTT
GGATCAAGATCAATTTTTATTTTTCCAAGATGTTGTGGAGGTGTACAATG
CACTTGGGAAATTGGAGATTGTCCAGAATGAGAATGTATCGTTGAATATT
GGCCCTGATTGTAAGTAACAGGCCCGGTGGAAGCGGGGAGACTGGGGAGA
ATTCAGCCTTCCCAACTTTGAGCAATTGAGAGTTTTTTTCTCAAATTCCT
AGTGAATTTTATCTCATGTTGAGCCTTAAGCATCCCCACTTTTACGGTTG
TTCAGCCGGACCCGAGTAAGCTCTATCTTAGGACGGTCGACTTTCTTTCT
TGTTATTTCCGTTGTCTTCAACTACCCCCCTTCCTTAAAGGTATTTCCTT
AGAGCTTAGCAAACGCTATTTTTTCTTACAGTATTGACCGTACCACCTCA
AAACGTTACTGCATTTTCGCCGTCTCCGGAAATTCTGTCAATTTCATGGA
ACGCTCTCAACCAATCAAATGTTGACACCTACATCATCTTTTATCGTGAA
AAATTACTTTCAAATCAACCCTACTCTACTTATGCTACTGAAAACACTAC
AGCTCATTTGACGTGGCTGAAACCAGGGACGGAGTACGTTTTCAGAGTTT
TAGCATTCTCAAATGCAAAAGGAAATGGGATAGCCAGTCCTTTGACTTCA
ACATGGACTATGGAAACGGGTAAGTAAAGGCTGAAGCCAAAATAACTCTA
AAAGACTGAAATCTGACAAATCATTCCATTATTAACGGATAAGATTACTT
TTTATAATGTAAAAAATATATAATATAACCGTCTAGTATGCAAGAATAGC
ATCGTCGCAGGTGGAGTGGGTAAGTAGAGAGACCTTTAACAACTTTGAAC
CTTCTCATTTTAGTACCCCTGGTTTCACCTTTCAATATCACAGCTTCGTC
TTCTGGACCATTTTCTGTTTATGTCAGTTGGGTTGGAGTTCCTCAAGAAC
AAATGAATGGAGTTCCTCTCGGATATCATATTTACGCTTATTTACAAAAC
TCTTTGCTACCAACACAAAACGTCTCTTTCGATTTGAGTGGTGTATCTTA
CACGGAGGGATTGGAACCGAGTACGTCATACGTTTTTGAAGTTTGCGCGT
TCAACAGTGCAGGAGATGGTCCGTGTGATAAAGCGAGCGCTCGTACTCTG
GATTCAGGTAAGCCTCTTTTTCATTACTGCTGTTCTGTAAAAACTTATAA
ACTACTTACCTAAGATTTAACGTTTCTTAAACTGTTTTTGCGGCTTCAAA
ATATCTTCATCAAATCACTAAGGTCCAAAAGAAGAAGAACGTGCTATAAA
ATTTGCACTCCATAAAGCATAATTTATGCAAATTATACAAATNGAACGTG
CTATAAAATTTGCACCCCATAAAGCATAATTTATGCAAATTATACAAATT
ATACTAATTTATGCAAAACGCGTCGTAAAATTCGTATTTTCTCTGTGAAG
AGAATTCATCTTCCTTTTGATTCTAGGAAAGTTGAAAGAACTTATTCTCT
AAAAATTTGAAAATAGTCCAAATTACGTAGTTTATGCTTTTCGATACGAT
TTTCAAGAGAAATTGGATTTTCATCGAATAAGGAAGCGTATCGAACAGTA
GAACGTCGAATTAAAAAGCGTCAACTGTATTTTGATATACAGAATGATTT
TTCCCCATAGCTCCATCCGCACCACCTGCGAACATTTACATCAGTTCCAT
CAAAACACACACTCAACTAACCGTACACTGGTCTTCACCACCAGCTGATC
AAATCCATGGTGATCTTTTGTCATACAAAATCAAAGTCTTCCCAATCAAA
AGTGGAGCTAACGTCTATATCAACCCTAAAGTTGATGTTTATGATTTGCA
TCCATCATTAAATAGCCTCACTTTGAAGTTTCTGGATTCAAACACGTTTT
ACAATTTTGAAATCATGGCTGTCAATCAATTTGGTGAAGGTGTCAGTGAC
CAAGTAGTCGGAAGTGAGTTAATATTAAGATTCAAGTGAAATTTTCTCAT
CATTTCTTTCTGAATTGCATGTGTCTTGTTTTGGTATTTCCAAGTTATTT
GCAGTTCACCCCTTTCTCACAGACCCACTGGGAACCCTTCTCACTGGAAA
AATTTGCCAAATATCGTCCCCAGTGGAAAACTATCCTCCAATTTTCATCC
CCACTGAAAATAATCAAATAAACACATCCTCACTGCAAAATTTTTACTAA
TTTGCCCATCCCTATTGAATTTTCCGACTTGAAAACAAAATGATTGAAAT
TTCCAGCCATAGAAAAATATGGGAATATCAATCCCCATCGAGTTTCAGAG
TTCAGTTATTTTCATCCCCACTGGCTGAAAAAATCCTACCGGTTCTGTGA
GAAAGGGGTGTTGTAGTCCACCAGCTGATTGTAATAGTAAAGGTTACCAT
TACTTAAAGTGAAAATAAACTAATCTTCTTAAAAATGACAATGAAATTTA
TGTTTGAATTGTTACCTAAAGAAATACGGTAGAGTCTCTTTAACTTAAAC
CTCTGTAACTCGAAATTTCGTGTCTTTCGTGTGAGTTCGAGTTATGGAGA
CCCAACTGTATCATATCTCTCTCTCATAGGAACGTGCCTTTGTCCACCTG
TAGTTTCAACAAACTATTATCTACTTGCTCCATACTTAACCAAAGATGCC
GATGATCAACTCTCTGGAGTGTTCGGTGAAATATTTCAGAGTGCAATCCA
AGCTACATGCGGTGTGTGTAATTCACCGAACGGACTGATACATTCAAAAT
TGGATATTTTGCGGAACGGCAGAGAAAGTCTTGCTCAGAAGTCATCTGAG
TTAAAGATTTTAAAGGAGGTTGACAAGTTCACAGATTTATCTTTCCCGAT
AATTGGGAATACATATTCGGACGAAATGGTTGGTTATCCGTTTGTTCCAC
TGGTCGGACACCCAGGTGTTGTAGCAATTGTCCGAGATAAAAATATCAAT
GAGATTGTAGTTGAAATGATTATGGTCATTTTGGGTATTTATCCATTGCT
TGGGTTGAACTTTCTAATGATGTTGGCAGCAGGATATATTGTGTGGCTTT
TGGAAGCTTGCAACAATCCTCGTGGGGAAATTGATTTTGCAAAAACTTGG
ATACTTGGAATTTACGAAGGCTGGTATTGGGCTTTCGTCACTCAAGGAAC
TCATGGGTAAGAATTCTTCATTTAAAATTGTTCCATATTTGCCACCACAG
GGAGCCTAAAGTGAGTGAGGGGTTGTATTCCACACATAACATAAAGAATT
CGTACCTGTATCTCAAAATTAACTGTGAATAGTTCTTAGATTTTTTCAAA
CGTTTACCCGTAATACATATCAGAAGAATTAACGCTAGAATAGTAAGATA
CATTCGCAAGATACATCGTGGATCATTCGTTTGTAGGCAGTAAAAGATGA
AATGGAAAGAGATTCAAACACATGCAATTTCGACGGATCCATTTGTTATT
GGTTATCATTTTATTGCAGTCATATAGAGTGTGTTTGTCTCCCACACTGA
ATATCTCATTGTTTCTTTTTCAGATACGGTGATTTCACAGTGACAAAATT
TCGCGCAAGGTTGTTTGCTGTAGCCTGGGCTCTAATAGGCTTAGTCATGA
CGTCATTACTCATTGGAGCCATAGTAACAGCCTTGACAACGGTAAATGGT
GCAGCTCAATTCAAAATTTACGGTAGCGAAGTTGGAGCTTTGAATGGTTC
ATTCGAAGAAAAACTTGGACTTTTGAGGAATGGAAAAGTGAATGAGAGTA
CGTGAAATGAATTTTAATCTGTTTTTCAGTCTGGATTATGTACCATGAGC
ACTACAGTCTAGCTTTCTCCGAAATTTAAAGGGATAATCAGATGGTTTGA
GATTTTATGCCTGAAGAAACCCTGTGTTGTTTTGAGTAAAATCGCCAAGT
ATTTTTGTCTAACTATATTTTAAAGTCGAGATGTCACAATTCAAAATTTC
TGAACATGGGTTCTTGCACGGTTCTTATGTTGAAATTGTATTGTTTTTAC
TAAAAGTCAAAAACTTGTAACTTAATTATGTCGACTTTGGGAAATATTTA
GGCAAAAAAATGTTGAGGTTTTTCTCTGGACAATAGAAGGATTCCACGTG
CCAAATATCACAAACAACCTGATTATCCCTTTAAATAAACAATGTTCGAA
AGCAAAGAATGAGCTCATACGCATGCTCACTTTATTTCTGGCTTCATAAA
GTTGTAAATAAAGAAAGGCTAAATATCTGCTTTCTAGTCATGGAGCTTTA
TTTAGTTTTGGTCAAATTTACATAATTTCCATCATTCTAAACGCATTGTA
TAAGTTATGGGATCGCCTCTTCAAATTGAATTTTTTGTTAATTTTCACAT
ATTTTTACAATCTTGTCGAGTCTTAGAGACCTCTATACTACTGCTGTTCA
TCTCGCTCATTTAAATTGATTTTTTAAACAGAAAGAGCGTACACCACAGT
TGCAGAGCTCCGAGAAGACCTGCTTGCAGAAAAGATCGAAGGAGTGTTGC
TAGATGCATACACAGCTGGAGCGAACGCACATCTCTTCGCAGACGAACGA
CTCCGCGCGGCCACGAAATTAGAATACCCGCGGTCGTATGGGTTTGTTTT
GTCAGGTGGTTTGAAAAGTATGGCGGCAGAGTTCAGAAGTTATATCAGAT
CTGACCAAGAAAGAGTTTTAAGCGCGTTAATGAACTCTACTGAGCCGATG
GGGGTAAGATTACCATTGATGTTGAAAATTAATACAGTTTCGCTCTCTAA
TTCGATCTTCAAGGGGAATTGGATTTTCATCGAATAAGGGAGCTTATCGA
ATAAGGGAGCATCGTTTAAGAGAGTTTCTTGTTGATGGGGACTTTAAATT
TCATCGAATGAGGGAGCTTATCAAACAGTAGAACGTCGAATTAGAGAGTG
TCAACTGTAGTAGCAAAACAGCTATAGAAGAAATATAATTACTTAAGTTA
AGTTCAGGTTGAGATTACTTTTTATGGTGTTGCAATGATCGATGTATTTT
CTTCCAGGTGTCGCCACCAGCAGAGTTGAAATCGCCTTTCGATCCAGAAT
CGAGTATTTTAGCAACAGCTTTGGTTTCCATGACAATAATGATTGTTATT
TTTTCAATCCTTGGTTTGTTATGGTCACACTATTTGAAGAAATTGAACCA
AAAAAATGCCACGCTGGGTAAGATTCTTTTACATTCAAGGCCTTTTAAAA
TCTTGAGGCCAAGAAGATTCGACCCCATAAATACGTTTCATGCTTCTCAA
AGTGGACTTCTAAATTCTTTTGGGTAAAATTTGATAAAATCTTATTATTT
TCGTGCTTTAAAATGGATACAACGTACCATAATGGTCGATTTTCTCTGCT
AATTTTGATAATCCGGTGTAATCACATACTCTCCCCTGGAGTATAAATCA
CCTTTGATCTACATTTAAGTTGTCTTTGTCGTCAATCCTCCCTGTTGAAA
CCATTGACTTCCAAGCCCGAAGGGCTAGGCTCGAGACTCCTGGATGGGAA
ATGAAACCACTTATTTCCCATCCAGAACTCCCACCCATTGTTTTCACACA
AACGCCGGATTAAAACTTAAATTTATCACTAGATTTCAAAAGATGCAGTC
CTCAAAAACAAAGGAACCACTAGATACAATCCGTCGTCATGATTACGGCG
TGTTCTAGGCGCGTTTTGGATGGGAAATAAGTGGCTTCACTTTTTCTTGC
CTGGGAAATGTTAGAGATTCTACTCTAGCCCTTCGGGCTTTAAACTCAAT
GGTTGAAACTACCATCTCCACTCATTGCTTTAAAGCGAAAATTTATGATG
CAAATACTCCGTTATCTTTAGATAACAAAGATATTTTGAACCAATGCAAC
GATATGGTGGACGATTTCAAATCCTCATTGAATGGAAAAATTACAGAGCT
GGAAGACAAACACTTTCTACAAAGAGAGCATTTATTCAAAGATCATCACG
GATATAGCGCTACAGATAAACTACCCCGTTTTTTAAATAGCAAGCTTCAA
AGGAATGTCATTAGACCCGTTCTCTCAAACAAAGAAGATCAATTAGACGA
ACAAGGAGAAATTAGGTCTGCAGAATATACAGAAGATATCGAAAGTGGGC
GTAATTCAGCCGCCTCGGCCAGGGAAAGCGCCCATGTTGATAAACCATCC
ACACCAAAGATTGAAGAACCAGATTTCGATATAGGTCAATTGGGTAAAAC
AGAAGAGACCAACATTGAAGCATTTGAGAATGTGGACTCTGATGACGAGT
AGTAGTGAAATCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011745XLOC_011745Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020947-exon-sc0000374-1575043694:92341..92414TCONS_00020947-exon-sc0000374-1575043694:92341..92414Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:91355..91509TCONS_00020947-exon-sc0000374-1575043694:91355..91509Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:90796..91083TCONS_00020947-exon-sc0000374-1575043694:90796..91083Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:90308..90601TCONS_00020947-exon-sc0000374-1575043694:90308..90601Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:89502..89804TCONS_00020947-exon-sc0000374-1575043694:89502..89804Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:88309..88885TCONS_00020947-exon-sc0000374-1575043694:88309..88885Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:87718..87941TCONS_00020947-exon-sc0000374-1575043694:87718..87941Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:86762..87033TCONS_00020947-exon-sc0000374-1575043694:86762..87033Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:86298..86457TCONS_00020947-exon-sc0000374-1575043694:86298..86457Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1575043694:85199..85643TCONS_00020947-exon-sc0000374-1575043694:85199..85643Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:92341..92414TCONS_00020947-exon-sc0000374-1510915933:92341..92414Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:91355..91509TCONS_00020947-exon-sc0000374-1510915933:91355..91509Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:90796..91083TCONS_00020947-exon-sc0000374-1510915933:90796..91083Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:90308..90601TCONS_00020947-exon-sc0000374-1510915933:90308..90601Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:89502..89804TCONS_00020947-exon-sc0000374-1510915933:89502..89804Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:88309..88885TCONS_00020947-exon-sc0000374-1510915933:88309..88885Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:87718..87941TCONS_00020947-exon-sc0000374-1510915933:87718..87941Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:86762..87033TCONS_00020947-exon-sc0000374-1510915933:86762..87033Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:86298..86457TCONS_00020947-exon-sc0000374-1510915933:86298..86457Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1510915933:85199..85643TCONS_00020947-exon-sc0000374-1510915933:85199..85643Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:92341..92414TCONS_00020947-exon-sc0000374-1491911889:92341..92414Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:91355..91509TCONS_00020947-exon-sc0000374-1491911889:91355..91509Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:90796..91083TCONS_00020947-exon-sc0000374-1491911889:90796..91083Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:90308..90601TCONS_00020947-exon-sc0000374-1491911889:90308..90601Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:89502..89804TCONS_00020947-exon-sc0000374-1491911889:89502..89804Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:88309..88885TCONS_00020947-exon-sc0000374-1491911889:88309..88885Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:87718..87941TCONS_00020947-exon-sc0000374-1491911889:87718..87941Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:86762..87033TCONS_00020947-exon-sc0000374-1491911889:86762..87033Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:86298..86457TCONS_00020947-exon-sc0000374-1491911889:86298..86457Clytia hemisphaericaexon
TCONS_00020947-exon-sc0000374-1491911889:85199..85643TCONS_00020947-exon-sc0000374-1491911889:85199..85643Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000374supercontigsc0000374:85199..92414 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.894579	1.02562	0.573128	0.317008	2.14861	1.36613	1.45673	1.76388	1.81632	2.42766	1.29269	1.94665	8.56781	7.53822	1.16269	1.17483	0.75682	0.784278	16.9646	15.4798	2.35785	1.9524	0.419764	0.814232	3.57844	3.93445	0.0360742	0.288024	0.167319	0.0253057
Blast
[Close]
BLAST of TCONS_00020947 vs. Swiss-Prot (Human)
Match: NEO1 (Neogenin OS=Homo sapiens GN=NEO1 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.109e-17
Identity = 95/329 (28.88%), Postives = 146/329 (44.38%), Query Frame = 1 
Query:  139 FFQDVVE--VYNALGKLEIVQNENVSLNIGPDLLTVPPQNVTAFSPSPEILSISWNA-LNQSNVD--TYIIFY-REKLLSNQPYSTYATENTTAHLTWLKPGTEYVFRVLAFSNAKGNGIASPLTSTWTMETVPLVSPF-NITASSSGPFSVYVSWVGVPQEQMNGVPLGYHIYAYLQNSLLPTQNVSFDLSGVSYT-EGLEPSTSYVFEVCAFNSAGDG-PCDKASARTLDSAPSAPPANIYISSIKTHTQLTVHWSSPPADQIHGDLLSYKIKVFPIKSGANVYINPKVDVYDLHPSLNSLT--LKFLDSNTFYNFEIMAVNQFGEG 1092
            F+Q + E  V NA    +++  E+     GP  L   P++V A   S   + ++W    +  + D  TY +FY +E +   +  +T         +  L P T Y+FRV+A  N  G+G +S      T   V L  P  N+ A ++ P S+ V+W        NG    Y +Y Y++      Q+V  D+S  SYT  GL+  T Y F V A+N  G G      + RTL   PSA P N+ +  ++    + +HW  P     +G +  YKI+              K DV +   S   L+  ++ LD  T YNF + A+   G G
Sbjct:  407 FYQCIAENDVGNAQAGAQLIILEHAPATTGP--LPSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMA-QNKHGSGESSAPLRVETQPEVQLPGPAPNLRAYAASPTSITVTWET--PVSGNGEIQNYKLY-YMEKGTDKEQDV--DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDVPSAAPQNLSL-EVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR--------KSDVTETLVSGTQLSQLIEGLDRGTEYNFRVAALTINGTG 718
The following BLAST results are available for this feature:
BLAST of TCONS_00020947 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEO11.109e-1728.88Neogenin OS=Homo sapiens GN=NEO1 PE=1 SV=2[more]
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